Syngnathoides biaculeatus (alligator pipefish): 133497943
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Entry
133497943 CDS
T09681
Symbol
secisbp2l
Name
(RefSeq) selenocysteine insertion sequence-binding protein 2-like isoform X1
KO
K19539
selenocysteine insertion sequence-binding protein 2
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbia03019
]
133497943 (secisbp2l)
03012 Translation factors [BR:
sbia03012
]
133497943 (secisbp2l)
Messenger RNA biogenesis [BR:
sbia03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
133497943 (secisbp2l)
Translation factors [BR:
sbia03012
]
Eukaryotic type
Elongation factors
Elongation associated factors
133497943 (secisbp2l)
BRITE hierarchy
Motif
Pfam:
Ribosomal_L7Ae
COG2_C
Motif
Other DBs
NCBI-GeneID:
133497943
NCBI-ProteinID:
XP_061670212
LinkDB
All DBs
Position
3:4466155..4493789
Genome browser
AA seq
1086 aa
AA seq
DB search
MDASDIKDVKLSAEVEPFIPQKKGLEGTLVGMSLSGEPVGGGGGGGGLGGGNGEVETTPI
PSYLITCYPFVQENQPNRHHHPMYNGGELRWQQPNPGPGAPYLAYPIMSSPQPPVSSDYT
YYQIMPTPCPPVMGFYQPFPGTYTGPVQPGVVNAVSADVGERPPLPLGPAFGMPNQRARA
MIRPNLPKQQHLGVSQAARGRRPPNRSVAVQKELCTVGHEGWTKRVLLVDAAQQTDLPGE
AASPLLWKNRTKRQPMSNAAESYSDQGTSEADIDSDSGYCSPKHKQTAGVAHRAAETSAP
SSGVETGVMKSTWVNVASQATQKSWGDRNGHFHRADQRKNPEQSNFSQDFRSVCPGLGLP
NQSEQKPQPSPVTGDEITAEPLYFEDEDEFPDLPTGAGVQRCAKGEVTPAQTQMQPKPQR
NLIENLAENSPINIVQTPIPITTSVPKRAKSQRKKALAAAVATAQEYSEISMEQQKLQEA
LNKAAGKKRKTPVPLDLGDMLAALAKQQQALKAKQITNTKPLSFTVGTATPFHSSASTNL
AAMLKGHTQPHLGSPNTLDSTAPRIKRGKEREIPKVKRPTALKKIILKEREGKKGKTSMD
QESSGQEDHGDDCLHFTEDLSQELGSLEENGLSVPSDASLSPASQNSPYSITPVSQGSPS
SSGIGSPMASNAITIIHSRRFREYCNQVLSKEIDESVTLLLQELVRFQERVYQKDPKKAK
SKRRLVMGLREVTKHMKLCTIKCVIISPNCEKIQAKGGLDEALYNVIAMAREQEIPFVFA
LGRKALGRCVNKLVAVSVVGIFNYSGAEELFDRLVSLTEEARKAYKEMVSSLEQEQQEEA
LKHVKKVPHYMGHSRNHSAASATSFCSVISEPISEVNEKEYETNWRSMVEASDAPEPVEA
EKSAPSPPAAPHRDSETPSAHASGVPPRAAPPPQGHGERDEARADDRLELASQQSTETGS
LDGSCRGPLNSSITSTTSTLVPGMLEEAEDEDEDEEDYAHGPISVEVPTHSSRIESWVTT
AVENLQLKKSQESTEEEDDEEEEGEEEEEEEEEEEDEEEEEGLVSEGTTDTKVETKEQAG
AGEVTA
NT seq
3261 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaagtgacattaaggatgtgaaactttcagctgaagtggagccgttcatccca
cagaagaaaggtctcgaaggaaccctggtcggcatgagtctgtccggagagccggtgggt
ggaggaggaggtggcggaggcctaggaggcggcaacggagaggtggaaactactccgata
ccgagctacctcatcacctgctacccttttgttcaggagaaccaacccaacaggcatcat
catccaatgtacaatggaggggagctgcgctggcagcagcccaaccctggccccggtgct
ccctacctggcctacccgatcatgtcttctcctcaaccacccgtgtccagtgactatacc
tactaccagatcatgcccaccccgtgccctcctgtgatgggcttctaccagcccttcccc
ggcacctacacagggccggtccagccgggggtcgtcaacgcagtctctgcagacgtcggc
gaaaggcctcctctgcctcttggcccggcgttcgggatgcccaatcaacgagcaagagcc
atgatccggcctaatctcccaaagcagcaacacttgggtgttagccaggcggcgaggggt
cgccgtcccccaaacaggagcgtggcggtgcagaaggaactgtgcaccgtaggccatgaa
ggttggactaagagggtgctgttggtggatgcagcgcagcaaactgatttgccaggtgag
gcggccagtccgctgctgtggaagaaccgaacgaagaggcagccgatgtcaaacgcggct
gaaagctacagcgatcagggcaccagcgaagcagatatagacagcgacagtggatactgc
agccccaaacataaacagactgcaggagtcgctcatcgagcagcagagacgtcagcacca
tccagcggagttgagactggtgtcatgaaaagtacatgggtaaatgtagcgtcacaggct
acccagaaatcctggggggacaggaacggccatttccatagagcggaccagaggaagaat
cctgagcagagtaacttctcgcaggatttccgcagtgtctgtccaggacttggtcttcca
aaccaatcagaacaaaaaccgcagccgtcaccggtcacaggcgacgagatcactgcggag
cccctttactttgaagatgaagatgagttcccagatttacccactggagctggtgttcag
cgctgcgccaaaggagaagtgacgccagcacagacgcaaatgcagccaaaaccgcagaga
aatctgatagaaaacctcgccgaaaactcccccatcaacattgtccagacaccgatccct
attaccacatctgttcccaagagggccaagagccagaggaagaaggctctggccgctgct
gtggcaactgctcaggaatactctgagataagcatggaacagcagaaattgcaggaggcc
ctcaataaggcagctggcaagaagagaaaaactcctgtcccgctggacttgggagacatg
ctggcggctttggctaagcagcagcaggcactgaaggccaaacaaatcacaaataccaag
ccgctatcttttacagttggaacagcgactccattccacagttcagcttcaaccaacttg
gcagctatgctgaagggtcatactcaaccacacttgggctccccgaacactctggactcc
accgcgccacgaataaaacgagggaaggagcgcgagatccccaaagtcaagcgaccaaca
gctcttaagaagattattctgaaggagcgagaaggcaaaaaaggtaaaacgagcatggat
caagagtcgtcaggccaagaagatcatggggatgattgtttgcattttactgaagatctt
tcccaagagcttggctctctagaagaaaatgggctgagtgtgcccagcgacgcatccctt
tccccagccagtcagaattccccgtacagcatcacccccgtatctcagggttctccttcg
agctccggcatcgggagtcccatggcttccaacgcaatcacaataatccacagtcgacgt
ttcagagagtactgtaaccaagtgctgagcaaggagatcgacgagagcgtgacactgctg
ctgcaggagctggtccgtttccaggagcgtgtctaccagaaggaccccaagaaggccaag
tccaaacgccgcctcgtcatgggtctccgagaggtcaccaagcacatgaagctgtgcact
ataaagtgcgttatcatctctcccaactgtgaaaagatccaagccaaaggtggtttggat
gaagctctgtacaatgtcatcgctatggctcgagagcaggagataccttttgtgtttgcc
ttgggcagaaaagcgcttggacgctgcgtcaacaaactcgtcgccgttagtgtggttggc
atcttcaactactctggagctgaggagctattcgaccgtcttgtgtcgctgacagaagag
gccaggaaggcctacaaggaaatggtgtcgtccctggagcaggaacagcaagaggaagca
ttaaaacacgtcaagaaagtcccgcactacatgggacactcacgcaaccactccgcggcg
tccgcgacctccttttgctccgtcatctccgagcccatctcggaagtcaatgagaaggaa
tatgaaaccaactggagaagtatggtggaagcttcagatgctccggagccagtcgaggct
gaaaaaagcgcgccttcacctcccgcggccccccacagagacagcgagaccccgtccgcc
cacgcaagcggcgtccccccgagggcggcgcccccaccgcagggtcacggcgagcgcgac
gaggcccgtgccgacgaccggctggagctggcctcccagcagagtacggagacgggctcg
ctggacggcagctgcaggggcccgctgaactcctccatcacctccaccacctccacgctg
gtgccggggatgttggaagaggccgaggacgaagacgaggacgaggaggactacgcgcac
gggcccatttccgtggaggtgcccacccacagcagccgcatcgagtcgtgggtgaccacg
gcggtggagaacctgcagctgaaaaagagccaagagagcacagaggaagaggacgatgag
gaagaagagggggaagaagaagaagaagaagaagaagaagaggaggacgaggaggaggag
gaaggccttgtttccgagggtaccaccgacaccaaagtggagaccaaagagcaggcgggg
gccggcgaggtcacggcgtga
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integrated database retrieval system
