Syngnathoides biaculeatus (alligator pipefish): 133497951
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Entry
133497951 CDS
T09681
Symbol
cdh16
Name
(RefSeq) cadherin-17 isoform X1
KO
K06810
cadherin 16, KSP-cadherin
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sbia04515
]
133497951 (cdh16)
Cell adhesion molecules [BR:
sbia04515
]
Cadherins
Major cadherins
133497951 (cdh16)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_4
Cadherin_CELSR2_9th
Big_9
RET_CLD1
InlK_D3
He_PIG
Protocadherin
Motif
Other DBs
NCBI-GeneID:
133497951
NCBI-ProteinID:
XP_061670227
LinkDB
All DBs
Position
3:complement(25110220..25135356)
Genome browser
AA seq
726 aa
AA seq
DB search
MSGQQQSFTVEVCVIDKNDNVPTFIQESMRGSVQLGLLKGIPFMQVEALDRDDRNTAHAE
LRFRLMEQTPRIPSSQMFFIDSISGEVSLTEDGASTLDPEMCGRYKLSVMVKDMAGKSNA
FFTTGIVIVEVTGNTWASPDPVRLQENLPGPYPIPISQVKWSGSQAEYSLEGEFPEMLFT
VSREGVIYLNAPLDRETQDQFLISILVERPDGREIAKPVELRVMVGDANDNRPTFPQAQY
HTVVKELAARGTEILTIQAADNDDPKTDNVRIFYRLVGQIPESPRALFRVDRDSGVISVQ
ADSMEGTAPQYTLTITAEDAKGLNSSCTVVVTVQDENNNPPLFSQHEYGPFHIPEDAPVG
TTVTAMLAGDADVRGGDSWQVNYRLESGNEEEVFTLFTDRQTNEVSLVLSKVIDFERESE
YILVLSAQNPVALVRGRYGPSSTATVSIYVDDVNEGPVLSQSHYEVTVREGEEPGRVIAT
IRGYDPDSHPIRYSLQGDTKRYFSIGKYSGELKTVQALDREENSTYTMEVIAVDGRNSSL
SASTLVTVQILDVNDNSPVLVGDYSWKYLCTPRWEDQALVLASRDSDGPQHGGRLNFSLR
SDAAVRRNWKLTPINDTHTNLSLNTPYLAPEVYTVPFTISDSSSPPRSTFINLPVTVCPC
NIRGNCKMAAKQLQGMPTIQSAVGILLGTFAVVGTILVVVFVRLSYQNPKQPGNTNQERV
PLKMSI
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgtctgggcagcaacagagcttcacggtcgaagtgtgcgtcatcgacaaaaatgacaac
gtgccaactttcattcaggagagcatgaggggcagcgtgcagctggggcttcttaaaggg
atccccttcatgcaggtggaggcgctggatcgtgatgaccgcaacactgcccacgctgag
ctgcgtttccgcctgatggagcagacacccagaatcccctcctctcagatgttcttcatt
gattccatcagcggagaggtttcccttaccgaggatggagcctcaacactggaccctgag
atgtgcggtagatataaactatcagtgatggtgaaggacatggctgggaagtcaaatgcg
ttcttcaccaccggcattgtcattgttgaagtgacggggaatacttgggcatcacctgac
cctgtacgattgcaggagaatcttccgggcccctatcccatccccatctcccaggtgaaa
tggagtggaagccaagcagaatacagcctagagggggaatttccagagatgctcttcacc
gtcagtagagaaggagtcatttatctcaacgcgcctctggacagagaaacgcaagaccag
ttcctcatcagcattttggtggagcgtccagatggccgagagattgccaagccggtggag
ttacgggtaatggtgggtgacgccaacgacaacagacccacatttccacaggcacagtat
cacacagtggtcaaggaactagcagctcgaggaacggaaatcttaaccattcaggcagct
gataatgacgatcccaagacggataatgtgcggatcttctaccgcttggtcggccaaatc
ccagagagtcctcgcgctctgttcagagtggaccgggactcgggtgtcatctcagtccaa
gcagacagcatggagggaacagcaccgcagtacacactcaccatcactgccgaggatgct
aaaggtctaaacagttcatgtactgtggtggtgacggtgcaagatgagaacaacaaccca
ccactcttctcccaacatgagtatggacctttccacattcccgaggacgctccagtaggc
accacagtgacagccatgctggcgggggatgcggatgttcgaggtggagacagctggcaa
gtgaactatcgtttagagtctggaaacgaggaagaggtcttcacgttgtttacagacagg
cagaccaatgaggtttcactcgtcctttcaaaggttattgacttcgagcgtgagagcgag
tacatcctcgttttaagtgcccagaacccagtagctcttgtccggggccgctacggtcct
tcatcaacggcaactgtatcgatctatgtcgatgatgtcaatgaaggtccagttctatct
caaagccattatgaggtgacggtcagagagggtgaagaacccgggcgggttattgccaca
atcagaggctacgaccctgattcacacccaattagatattctcttcagggagacaccaaa
aggtacttttcaataggaaaatattcaggtgagctgaaaaccgtgcaagcattggacaga
gaggagaacagcacatacacaatggaggttattgctgtggatggacgaaactcctcctta
tctgcgtcaaccttggtcacggtacaaattctggatgtgaatgacaacagtccagtgttg
gtgggtgactattcctggaagtacctgtgtacacctcgctgggaagaccaagcactggtg
ctggcttcgcgggatagcgatggcccgcagcacggggggagactcaacttctcgctgagg
agcgatgccgcagtccggcgcaactggaagctcactcctatcaatgatactcacaccaac
ctatccctcaacacgccatatctggcccccgaggtttacactgtgcccttcaccatctct
gacagcagctcacctcccaggagcaccttcattaacttaccagtgacagtgtgtccttgc
aacatcagggggaactgcaaaatggcagccaagcagctgcagggcatgccaactatccag
tctgcagtgggcattctgcttggcacatttgcagttgtaggaacaatcctcgttgtggtg
tttgtgcgactgtcctaccagaaccctaaacagccaggtaacaccaaccaggagagagtt
cctttgaaaatgtccatctaa
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