Syngnathoides biaculeatus (alligator pipefish): 133497981
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Entry
133497981 CDS
T09681
Symbol
lrrc4cb
Name
(RefSeq) leucine-rich repeat-containing protein 4C
KO
K07523
netrin-G1 ligand
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
133497981 (lrrc4cb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sbia04515
]
133497981 (lrrc4cb)
Cell adhesion molecules [BR:
sbia04515
]
Immunoglobulin superfamily
NGL family
133497981 (lrrc4cb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
LRR_1
Ig_3
LRR_14
ig
V-set
LRR_9
Ig_2
LRRNT
Ig_6
Syndecan
Motif
Other DBs
NCBI-GeneID:
133497981
NCBI-ProteinID:
XP_061670275
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All DBs
Position
3:28482991..28484886
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AA seq
631 aa
AA seq
DB search
MLNKMISSLQRQTMRSRRLKGALSNPLFVLLLALHILVVAGLVRAQTCPSVCSCSNQFSK
VICTRRSLRDVPDGISTNTRYLNLQDNLIQVIKVDSFKHLRHLEILQLSKNHIRSIEIGA
FNGLANLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRVPSLRRLDL
GELKRLSYISDGAFKDLSNLRYLNLGMCNLKEIPNILPLVRLEELEMSGNQLSIVKPSSF
TGLVNLQKLWMMHAQIQTIERNSFDDLQSLVELNLAHNNLTFLPHDLFTPLHRMERVHLH
HNPWNCNCDILWLSWWLKESVPANTSCCARCHTPTLFKGRYIGELDHSYFQCDVPVIVEP
PSDLNVTEGMGAELKCRTSSLTSVSWLTPNGSLVTHGAYKVRLSVLNDGTLNFTSVTMQD
TGTYTCMVSNTAGNISASAVLNVTSVENSGVTYFTTVTVETTETPGDDSHTPLPPFGWVS
SSTTKMTPVSTRTTERTYTIPVLDLDGDGALNGLDEVMKTTKIIIGCFVAITLMAAVLLV
IFYKMRKQHNQQDPDGPASSMEVITVEEELAGVAAIDRHLSLPPLEHYNHYNSYKSTYHH
PSMLSTIHSSTTQEHLLIQACSKDNVQETQI
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgctgaacaaaatgatctcctccctccagcgccagacaatgagaagtcgtaggctaaag
ggggcgctgtcaaaccccctctttgtgctgctcttggcccttcacatcttggtggtggcc
ggattagttcgagcacagacctgtccttctgtctgctcttgcagtaaccagttcagcaag
gtcatatgcacccgtcgcagtctacgagacgttccagatggtatctcgaccaacacccgg
tacttaaaccttcaggacaacctcatacaggttatcaaagtggacagtttcaaacacctg
cgccatctggagattctgcagctgagcaagaatcatatccgcagcatcgaaattggtgcc
tttaacggactcgcgaacctaaacaccttagagctctttgataatcgactcacgacaatc
cccaatggagcatttgagtatttgtccaagctaaaggagttgtggcttcggaacaaccct
attgaaagtataccatcctatgccttcaaccgagtcccctcgcttcgaaggttggacctt
ggggagctgaaacgtctctcctacatttctgatggagctttcaaggacttgagcaatcta
cgctatttgaatttggggatgtgcaacctcaaggagatccctaacatcttaccactggta
agactggaagaactggaaatgtctggaaatcaactgtccattgtcaagcctagctcattt
acaggattagtgaacctccagaagctgtggatgatgcatgcccagatccaaacaattgag
aggaattcctttgatgacttacagtcattagtggagcttaaccttgctcacaacaacctt
acttttctcccgcatgaccttttcacaccacttcatcggatggaacgagtccaccttcat
cataatccttggaattgcaactgtgatatcttgtggctcagttggtggctgaaggagtcc
gtccccgccaatacgagttgttgcgcccgttgtcatactcctacactctttaaaggccgc
tacattggggaattggaccatagttactttcagtgtgatgttcctgtcatagtggagcca
ccctctgacttaaatgtgacagaaggcatgggtgcagagctcaaatgtcgaacaagctcc
ttgacatcagtcagctggctcacgccaaatggctccctggtgacacacggggcttataaa
gtacgactctctgtactcaatgacgggacacttaactttaccagcgtcacaatgcaagac
actgggacatacacctgtatggtcagtaacacagcgggcaacatctctgcctcggctgta
ctcaatgtcacctctgtggaaaacagcggggtgacctattttacaaccgtcacagtggag
accactgagaccccaggtgatgacagccacactccactccccccgttcggttgggtgtca
tcatcgacgacaaaaatgactccggtttcaacgaggaccacagagaggacttacaccatc
ccagttctcgatttggacggggacggagccctcaacggactggatgaggtgatgaaaacc
accaagattatcattggctgctttgtggccatcactcttatggctgctgttctacttgtt
attttctacaaaatgaggaagcagcataaccaacaggatcccgacggcccagcctcctct
atggaagtcattacagttgaagaagagcttgcaggtgttgctgctattgacagacaccta
tcgctgcccccactggagcactacaaccactacaacagctacaagagcacttatcatcat
ccatctatgctcagtaccatacacagctccaccacacaggaacatttactgattcaagcc
tgttcaaaagacaatgtacaagagacccaaatctga
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