Syngnathoides biaculeatus (alligator pipefish): 133498102
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Entry
133498102 CDS
T09681
Symbol
ctr9
Name
(RefSeq) RNA polymerase-associated protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbia03021
]
133498102 (ctr9)
Transcription machinery [BR:
sbia03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
133498102 (ctr9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_14
TPR_19
TPR_8
TPR_16
TPR_12
TPR_CcmH_CycH
TPR_17
TPR_10
TPR_7
TPR_11
TPR_6
ARM_TT21_5th
TPR_9
TPR_Slam
ARM_TT21_4th
ANAPC3
TPR_EMC2
HAT_PRP39_N
Motif
Other DBs
NCBI-GeneID:
133498102
NCBI-ProteinID:
XP_061670523
LinkDB
All DBs
Position
3:6650979..6673761
Genome browser
AA seq
1157 aa
AA seq
DB search
MSRGSIEIPLRDTDEVIELDFDQLPEGDEVISILKQEHTQLHIWIALALEYYKQGKTEDF
VKLLEAARIDGNLDYRDHEKDQMTCLDTLAAYYVQQARKEKNKDAKKELITQATLLYTMA
DKIIMYDQNHLLGRACFCLLEGDKMDQADAQFQFVLNQSTNNIPALLGKACISFNKKDYR
GALAYYKKALRTNPGCPAEVRLGMGHCFVKLNKLEKARLAFGRALELNPKCVGALVGLAV
LELNNKEADSIKNGVQLLSRAYTIDPSNPMVLNHLANHFFFKKDYSKVQHLALHAFHNTE
VEAMQAESCYQLARSFHVQEDYDQAFQYYYQATQFASSTFVLPFFGLGQMYVYRRDKENA
AQCFEKVLKAYPNNYETIKILGSLYATSDDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQ
ILEQTDIQGALSAYGTATRILQEKVQADVPPEILNNLGALHFRLGNLEEAKKYFLASLDR
AKAEGEHDEHYYNAISVTTSYNLARLYEAMCEFHEAEKLYKNILREHPNYVDCYLRLGAM
ARDKGNFYEASDWFKEALQINQDHPDAWSLIGNLHLAKQEWGPGQKKFERILKQSSTQND
TYSMLALGNVWLQTLHQPTRDREKEKRHQDRALAIYKQVLRNDAKNLYAANGIGAVLAHK
GYFREARDVFAQVREATADISDVWLNLAHIYVEQKQYISAVQMYENCLKKFYKHQNTEVL
LYLARALFKCGKLQECKQMLLKARHVAPNDTVLMFNVALVLQRLATLVLKDEKSNLKAVL
SSVKELELAHRYFSYLSKAGDKMRFDLAHAASEARQCSDLLSQAQYHVARARKQDEEEKE
LRAKQEQERDLLRQQLMKEQEEKKSREAEEQKKLLEQRALYVEKTRNLLTFAEGASKEKK
KAGGGSGGRRKKGGDMDEFVNDDSDEELPVKKKKKRAASGSEHDEGEDGEKKARRKRKKA
ADISDDEEGGTQIKKQRKTKERKRIEKPQHERPPPSLKGKIKSKAIISSSESSDEDGLKI
AEDRNNRDSGSGSDEDDDGDHRKRIVSESDSDAGRDRSGNEAGSPRRSPGSPRRSAGSED
DDDDDSGSDRPGKKRSAQRQSDSDRSDNESKRSASDDESRPGSPVAASEPGSDNEGSPPR
SDNGSEPEGSDNDDDSD
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggggttccatcgaaatcccactccgggacacagatgaggtgattgagcttgac
ttcgaccagcttccggaaggcgacgaggtcatcagtatcctgaagcaggagcacacacag
ctgcacatatggatcgccttggccttggagtattacaagcagggcaaaaccgaggacttt
gtcaaactcctcgaggcggcgcgtatcgacgggaacctggactacagagaccacgagaag
gatcagatgacctgtctggacactctggcagcctactacgtgcagcaggcgcggaaagaa
aagaacaaagatgccaagaaagaactcatcacgcaggccacgctgctgtacacgatggca
gacaagatcatcatgtacgatcaaaaccatttgctgggaagagcttgtttttgcctgctg
gaaggggacaagatggaccaggccgacgctcagttccagtttgtcctcaaccagtccacc
aacaacatccccgctttgcttggcaaggcgtgcatctccttcaataaaaaggattacaga
ggagcgctggcgtactacaagaaggctctgcgtacaaacccgggctgtccagccgaggtg
cggctgggtatgggccactgcttcgtcaagctcaacaaattggagaaagctcgcttggcg
ttcggccgcgccctggaactcaaccccaaatgcgtgggggccctggtgggcttggccgtg
ctggagctgaacaacaaggaggctgactccatcaagaacggcgtgcagctcctgtcgcgc
gcctacaccatcgaccccagcaaccccatggtgctcaaccacctcgccaaccactttttc
ttcaagaaggactacagcaaagtgcagcatttggccctgcatgctttccacaacacggaa
gtggaggccatgcaggcggagagctgctaccagttggctcgatctttccatgtgcaggag
gattacgaccaagcctttcagtattactaccaggccacgcagtttgcgtcgtccaccttc
gtcttgcccttcttcggcctggggcagatgtacgtttaccggagagacaaagagaatgca
gcccagtgctttgaaaaagttttgaaggcctacccgaacaactacgagaccatcaaaatt
ctgggctccctatacgcaacatctgacgaccaggaaaagcgagacattgccaagggtcat
ctaaagaaagtcacagagcagtaccccgacgacgtggaggcctggatcgagctagctcag
atcctggagcagaccgacatccaaggggctctgtcggcgtacggcacggccacccgcatc
ctgcaggagaaggtgcaggccgacgtgcccccagagatcctcaacaacctgggggcgctc
cacttccggctgggcaatctagaagaagccaagaaatacttcctagcgtctctggatcgg
gccaaagccgagggggagcacgacgagcactactacaacgccatttccgtcaccacctcc
tacaatctggcacgtctgtacgaggctatgtgcgagttccacgaggcggagaagctctac
aagaacatcctgagagagcatcccaactacgtcgactgttatttgcgactcggtgcgatg
gcacgtgacaaaggcaatttctacgaagcttccgattggttcaaagaggcccttcagatt
aatcaggatcacccggatgcctggtccctcattgggaaccttcacttggccaagcaggag
tgggggccgggtcagaagaagtttgagcgcattctcaagcagtcgtccacgcagaacgac
acctactccatgctggctctgggcaacgtgtggctgcagaccctccaccagcccaccagg
gacagggagaaggaaaagagacatcaggatcgcgctttggccatttacaagcaggtcctg
cgaaatgacgccaagaacctctacgcagccaatggaatcggtgccgtcctggcccataag
ggttacttcagagaggcccgggacgtgttcgcccaggtgagggaggccacggccgacatc
agcgacgtgtggttgaatctggctcacatctacgtggagcagaagcagtacatcagcgct
gtgcagatgtacgagaactgcctgaagaagttttacaagcaccagaacacggaggtgttg
ctctacttggcgcgagcgctcttcaaatgtgggaagcttcaggagtgcaagcagatgctg
ctaaaggcccgccacgtggcgcccaacgacacggtgctgatgttcaacgtggcgctggtg
cttcagcggctcgccactctggtgctcaaggatgagaagagcaacctgaaggctgtgctg
agctccgtcaaagagttggaactcgctcacaggtatttcagttacctgagcaaagccgga
gacaagatgagatttgaccttgcacacgcagcgtctgaagccaggcagtgctcggacctg
ctgagccaggctcagtaccacgtggcacgagccagaaagcaggacgaggaggagaaggaa
ctgcgggccaaacaagaacaagagcgcgacctcttgcggcaacagttgatgaaggagcag
gaggagaagaagagccgcgaggccgaggagcagaagaaactgctggagcagcgagcgctg
tatgtggagaaaaccagaaacctgctcaccttcgccgagggggcctcaaaggagaagaag
aaggcagggggggggagtggaggacgccgcaagaagggcggcgacatggacgagttcgtc
aacgacgactcggacgaagagctgcccgtgaagaagaagaagaaaagggcggccagcggg
agcgagcatgacgagggggaggacggagagaagaaggcccgccgcaagaggaagaaagct
gccgacatcagcgacgacgaggaaggaggaactcaaatcaagaagcagcgcaaaaccaaa
gagcgcaagaggatcgaaaagcctcagcacgagcgtcctccgccttctctcaaaggaaag
attaagtcaaaggcgatcatctcatcctctgagtcttcagatgaggatgggctgaagata
gcggaggacaggaataatagagacagcgggtccggatccgacgaggacgacgacggtgac
cacaggaagcggattgtgtccgaaagcgactccgacgccgggagggaccgctccggcaac
gaggcgggcagcccccggcgctccccggggagcccgcgacgctcggcgggatccgaggac
gacgacgacgacgactccggcagcgaccgtccggggaagaagaggagcgcgcagcggcag
tccgactcggaccgctcggacaacgagagcaagaggtcggcgtcggacgacgagtcccgg
cccggttcgccggtcgcggcgtcggaaccgggatcggacaacgagggctctcctccccgc
tctgacaacgggtcggaaccggaggggtccgacaatgacgatgacagcgattaa
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integrated database retrieval system
