Syngnathoides biaculeatus (alligator pipefish): 133498110
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Entry
133498110 CDS
T09681
Symbol
igdcc4
Name
(RefSeq) immunoglobulin superfamily DCC subclass member 4
KO
K22657
immunoglobulin superfamily DCC subclass member 4
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sbia04515
]
133498110 (igdcc4)
Cell adhesion molecules [BR:
sbia04515
]
Immunoglobulin superfamily
DCC/UNC5 family
133498110 (igdcc4)
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Gene cluster
GFIT
Motif
Pfam:
fn3
Ig_3
I-set
Ig_2
ig
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
V-set
Fn3_VIN3
C2-set_2
Ig_ILCR1
Adeno_E3_CR2
Motif
Other DBs
NCBI-GeneID:
133498110
NCBI-ProteinID:
XP_061670543
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All DBs
Position
3:complement(15821049..15893100)
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AA seq
1196 aa
AA seq
DB search
MADKSVSVELSCGAGPSHVVLEPGSSLTLDCNLGARDTPLNISWLHDGQPLPLEANDAQR
YIVDQSLLLLLGSVDGAPPQALEGGYSCVSASAHGALTSRTVNVLLASLSSFRQEPSPQT
VPAGGAARFECQIDGVPTPVITWEKDKVAAPKHPRFIYLPNGVLQILEVTTEDEGAYRCV
ASNSAGRDMSHESRLTVTKDSAEPLNRVMIVAPPQNATVVLGRAAVMECMARGQPMPLVS
WSRLDGKSISTDVVVLATNLVIRDTRRHHGGVYVCRANKPRTREFVTAAAELHVSAPPVI
LQPPETVSLSRGNTARFVCNSSGEPAPVLRWLKNGRPVRSFRRAKIQNPGVLLINQLALE
DAGYYQCIADNALGSACATAMLTVIVREGLPGPPRRLSVTPYSSTTALLTWEKPEYNSDQ
IIGYSVHCQRAAGSDNVEYQFAMNNDTTEYHVKDLLPHTAYTFFVVAYSPLGASHPSLPV
TVDMLEDVPSAPPQLSIASTSPTDIRLMWHPLSSQHSRGAVTSYRIEYSSLDNADTIFSV
EVAGNETQFTLRELQPNQAYRLRIAAGTGVGFGVPSEWAHHQTLAHYNHTSHRTVMFAPT
ELKVRARVSTLNVTWQPSPNHTAVSGYKLSCQEVDADGEKTTQTHVVRLRKKARYHLLTG
LVPDQRYEVRVWAFTKQIDGSAAVWKGRTEKADKASFLPMRPPPLPPSIIEALANGTTSI
RLRWEKPRFSTVRIINYTVRCSPAGTTNASLVTYHTSSAQEILIGALKPFTRYELAVQSN
AVDAVGPFSGTVEESTLSDRPSSPPQELRLSSIDSSSVLASWRPPLEPNGVIMSYRILYS
SNLSQPDHMWRNLSQEGGINNVEVKGLSSGTHYFFKLSASTEVGAGPYSLVKDIHTPSEQ
YELDIHAVTGIIVGVCLGLICILLCMCFSFRNTKSRGVSGGLDSSAAATHYRRGGHPSSA
HAPECSDCHELETLMPSTGQESGQLSSEPPEEQSLTAAWNGSISHNWANRITQYRDTITE
DSSGFTVGKLNMKKQTDFPSASQSRTQVEAEVIVHSQLSDPANVKAKEEELRRLKDSDAT
RRPSIGQTEENLSGKQTLSPSPQSLHLTNPEPDCNRQIEDGPTEAVCAGPKQDSGLTNGF
HSPKTLWPVPKSGENGNVRRCPSAQANTKSGGLTPVPFVTSGLVHPTSVAHSYLCP
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
atggctgataagtctgtttcggtggagctgagctgcggggccggaccaagccatgtcgtg
ttggagcctgggtcctccctcacgctggactgcaacctgggggcccgcgacacaccgctc
aacatctcctggctccacgacggccagcccctccctctggaggccaacgatgcacagcgg
tacatcgttgaccagtccctcctcctgctgctcgggtctgtggatggagctcccccccag
gctctggagggaggctacagctgtgtgagcgccagtgcacatggagctctgaccagccgg
actgtcaatgtgctgctggcaagtctgtcctccttccgtcaggagccttcacctcagact
gtgcctgctggtggtgcggctcgctttgagtgccagatcgatggtgtgcccacacctgta
attacttgggaaaaggacaaagtcgctgcccccaagcacccaaggttcatttacctccct
aatggcgtgctccagattctggaggttaccacagaggatgagggcgcctaccgctgtgtc
gcatccaactctgccgggagggacatgagtcacgagtcccggctcactgtgaccaaagat
tctgcagaacccctgaacagagttatgatcgtggcaccgccacagaatgcgactgtggtg
ctgggtcgtgcggcagtgatggagtgtatggcccgtggccagcccatgccgctggtgtcc
tggagcagactagacgggaagtccatttccacagacgtggtcgtcctcgccactaatctg
gtgatcagggacacaagacgccaccacgggggggtctacgtctgcagggccaacaagcct
cgcaccagagaatttgtcaccgctgctgctgagctgcatgtgtctgcacctccagtcatt
cttcagcccccggagacagtgtccctctcccggggaaacacagctcgattcgtgtgcaac
agctccggtgagcctgccccggtgttgcgctggctgaagaacggccggccggtccgttcc
ttccggcgcgccaagatccaaaaccccggcgtcctgctcatcaaccagctggcccttgag
gacgcaggctattaccagtgcattgccgacaacgccctgggcagcgcctgcgctaccgcc
atgctcacggtcatcgtgagagagggcctccccggtccgcctcgacgcctctccgtcact
ccttattccagcactactgctctgctcacgtgggagaaaccagagtacaactcggaccaa
atcatcggctactcagtgcactgccagcgggctgcaggctcagacaacgtggagtaccag
tttgcaatgaataacgacaccaccgagtatcacgtgaaggatcttctcccccacaccgcg
tacaccttctttgtggtggcgtattctcccttgggagccagtcacccgtctctgcccgtt
actgtcgacatgctcgaggacgttcccagcgcgcctcctcagctgtcaatagccagcacg
tcaccgacggacatcaggttgatgtggcatccgttgtcctcgcagcacagtcgaggggcc
gttaccagctaccgtatcgagtacagctctctcgataacgcggacactattttctcagtg
gaggtggccggtaatgagactcagtttacgctcagggagctgcagcccaaccaggcgtac
agattgaggatagcagctggaacaggtgtcggtttcggggtcccgtccgagtgggctcac
caccagacgctggcccactacaatcataccagccaccgcacggtgatgtttgcacccact
gagctgaaggtccgagctcgagtaagtacgctcaacgtcacgtggcagccctcgcccaat
cacacggccgtctccggctacaagttatcctgccaagaggtggacgccgatggggagaag
acgacgcagactcacgtagttaggctccgcaagaaggccagataccatctcctcacgggg
cttgttcccgaccaaaggtatgaagtgagagtctgggcgttcaccaagcagatagatggc
tcagctgcagtatggaaaggaagaacagaaaaggctgataaagcgtctttcctgcccatg
cggccgccgcctttgccaccgagcatcattgaggcactagccaatggcaccacgtccatc
cggctccgctgggagaaacctcgcttcagcacagtgcgcatcatcaactacacggtgcgc
tgcagcccggccggaaccaccaacgcctcgctggtcacgtaccacaccagttccgctcag
gagatcctgatcggggcgctgaagcccttcactcgttatgagctggcggtgcagtccaat
gccgtggatgcagtgggacccttcagcggcaccgtggaggagtccaccctctctgacagg
ccgtcctcgccgccacaggagctccgactgagctccattgactcgtcctcggtgctggcg
agctggcggcctccgctggagcccaacggtgtcatcatgtcctacaggattttatatagc
agcaacctgagccaacccgaccacatgtggaggaacctctctcaggaggggggcatcaac
aatgttgaggtcaagggactatccagtggcacccattattttttcaagttgtcagcatct
acagaggtgggagctgggccttattcgcttgtgaaggacatccataccccttcggaacaa
tatgagctggacatccatgcagtaacgggcatcattgttggagtgtgtctgggtctcatt
tgcatcctcctctgcatgtgtttcagcttccgcaacactaagtcgaggggggtatctggt
ggcttggactcctcagccgcggccacccactacaggagaggcgggcaccccagttccgcc
catgcgccggagtgcagcgattgtcacgagctggagacactgatgccctccactggccaa
gaatctggccagttatcttcagaaccccccgaggagcaaagcctgacggccgcttggaac
ggctccatcagtcataactgggccaacagaatcacccagtacagagacaccatcaccgaa
gactcatcgggattcaccgttggaaaactcaacatgaaaaaacaaacggattttccgagc
gcatcccagtccaggacccaggtggaagccgaggtcatcgtccactcacagctgtccgac
ccggctaacgtgaaggctaaggaggaggagctaaggaggttgaaggactctgacgctacc
cgtagaccctcgataggccagaccgaggagaacctttctggtaaacaaacgttgagcccg
agcccgcagagtcttcacctgacaaatccggagcccgactgcaacaggcagatagaggat
ggaccgacggaggcggtttgcgccggaccaaagcaggactcggggctgaccaacggcttc
cactctccgaagacgctgtggcctgtgcccaagtccggggaaaacgggaacgttcgacga
tgcccctcagcacaagcaaacaccaagtctggcgggctcacgccggttccttttgtcact
tcaggcctggtccaccctacctcagtagcacacagttacttgtgcccgtag
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