Syngnathoides biaculeatus (alligator pipefish): 133498154
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Entry
133498154 CDS
T09681
Symbol
chd9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sbia03036
]
133498154 (chd9)
Chromosome and associated proteins [BR:
sbia03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
133498154 (chd9)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
DEAD
HTH_CHD1_Hrp3
HDA2-3
Chromo_MIT1
Myb_DNA-bind_7
Motif
Other DBs
NCBI-GeneID:
133498154
NCBI-ProteinID:
XP_061670633
LinkDB
All DBs
Position
3:18381159..18492447
Genome browser
AA seq
2926 aa
AA seq
DB search
MDFFDDPNLFGGGLEGVDVDGFPSAPSFVDELSLGPDFEPIQVEPLAPGKNQDMMLPVSS
TSTQQAIPTYSQQMGHYIGIKTQNSIGQSFCSTRGTGGMAAGQQGEYHDAPVSQLPQANG
LFFNNSSPMWGNQDQTGQMYHPLSQQQQQQQQQLYNQQIVRQQQTHHPQQYRMRVQQRQN
HPQQIFNQNEHQQMNFQAISLEQRHHHSFAFHQGRQPRSQHQVPQSPQQDQHQLTAVGTR
FHSALVPSQTDLLPGSCLQQQQPRSFSCGLRMAENNQPMDSSSLVRSLPTYSVSSINTYQ
AAQFPSYPGEPEMDSLSRPSLSSVSAAARPTATTTPHVAALPKLSGAACQFPSSSVNQAE
ECHFRALRCRGETRGNNKLSEIFGESMSCYPSVAHHLPSEQPQHCGDINTNGYPSLGDNL
LASEAQDEHLAGLEPPDLLPDFLPQLEAALSQPDQSNCSWVDSNQAWGPEHRTQTPVGQK
EEEPRKNTNGPASRVLSPVMKSSSSSSSSSSSPSSSSSSSSSSSCSPSEKTTLRQTHHQQ
DSAPLDKQEKANRIISEAIAKARQRGEKNIPRIMSPESFPSSSSQRKNHQDHKGNSKGRS
KFKASRKACIVPSSTSKQKPKIGKIVIKIGKKKKRMPNSSEEESDEDPSPRRSSKDSKRR
SNRQVKRKKYAEELEARLSDEDGKVIIKAKKTNPATSKQPAVQLFVENPSEEDAAVVDKI
MSSRVVKKEVSPEVLVEVEEFFVKYKNYSYLHCEWATEGQLEKDKRIQQKIKRFKMKQAQ
RALFFADMEEELFNPDYVEVDRVLEVSYCEDKDTGEEVVYYLVKWCSLPYEDSTWELKDD
VDQSKIEEFEQLQAAKPDSRRVERPPANLWKKREQSRQYRNGNSLRDYQLEGVNWLLFNW
YNRRNCILADEMGLGKTIQSITFLEEIYRVGIKSPFLIIAPLSTIANWEREFRTWTHMNV
IVYHGSIVSRQMLQQYEMYARDAQGRVLRGAYKFQAVITTFEMILGGCPELNAIEWRCVI
IDEAHRLKNKNCKLLEGFKLMSLEHKVLLTGTPLQNTVEELFSLLHFLEPARFPSENTFM
QEFGDLKTEEQVQKLQAILKPMMLRRLKEDVEKKLAPKEETIIEVELTNIQKKYYRAILE
KNFSFLAKGAGQANMPNLVNTMMELRKCCNHPYLIKGAEEKILEDFREVYSPAALDFHLQ
AMVQSAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGN
LRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRI
GQNKAVKVYRLITRNSYEREMFDRASLKLGLDKAVLQSMSGRDNSLGGGGAGGAGGTGGG
AVQQQLSKKEIEDLLRRGAYGAIMDEEDEGAKFCEEDIDQILQRRTKTITIESEGRGSTF
AKASFVASGNRTDISLDDPNFWDKWAKKADIDMEMANGRNSLVIDTPRVRKQTRPFSSTK
DELAELSEGESDSDDAKPKVRRAHERPNSYGRTECFRVEKNLLVYGWGRWKDILNHGRFK
KQLTDWDVESICRALLAYCLVHYRGDDKIKGFMWDLIAPTEDGQTKELQNHLGLSAPVPR
GRKGKKMKTQSSSFDIHKAEWLRKHNPEHMLQDDGYKKHLKHHCNKVLLRVRMLYYLKQE
VIGDEAQNVLNNVDASEIKILVPELDHSELPALWWDSVSDKCLLLGVYKHGYEKYNTIRA
DPALCFLERVGRPDDKAIAAEQRSNDFMDGDVDDPEYKPAPALLKDDIEDDASSPGDLVV
TDNPGDAVPGVASAYWPSSSLLTARLRRLITASQRYTKSRQILQIHQVQLQSHTQLAGMS
SMPLCPPPPSAALLLPPAVFSDPLNTKMAAKIERQQRWTRREEADFYRVVSTFGVVFNPT
VGRFDWTKFRAMARLHKKTDESLQKYLCAFAAMCRRVCRLPPKEGDSAVDPSLNIQPITE
ERASRTLYRVELLRQVREQVLRHPLLYERLQLCQISSDLPAWWESGTHDRDLLIGAAKHG
VSRTDYHILRDPDLGFMAAQRNYSQTKAMLPQQQQQQLVGFTPVLQPQYQPSAVPLPTPR
DLATGGVVPKAEPSSEGEESREKAKESWSPARALETPAGVAEDKRDSEGQMVAARTKPVT
PNSLERKPKKASKRGRRERRPSGSDSDGSSSSSSSRSSSSSSSTSSSSSRSGSSSSSSSS
SCSSGSSSSSSSSSTSSDDSDSEGEDRKKKVLAAPSVKVFDEDSVASLGATHRDAQDTPA
PQNGVANNASHPFQAGGFMLAASHWPKDRVIINRLDSICQAVLKGKWPATRRVYEPGGPV
ASFYTTKLLDGSLCEDPSASPQGSKVTEHVAESKEFSVKLNDQEGGLKLTFQKQGLPLKR
PLDSEEAPQAQQQQYLARLHELQNASDTGLADITQPQCSFQNMPSGLAGAMRLNGVLDSQ
PVVKRRRGRRKNVEGVDLLFMNRSQVPDQAAPGWGGIGQVGMAPMPGYNHQASGPSPENV
ESRVPVINLKDGTRLAGDDAPRRKDLNQWLQEHPGFVADTGAFIPGVNKMPLQFHVQDGR
PKQKRHRCRNPNKIDVNSLTGEERVQIINRRNARKVGGAFAPPLKDLCRFLQENPEYGVP
PEWGDVVKQSGYLPASMFDRILTGPIVPEEVSRRGRRPKNPLVKAATMTPNPAAAASSTL
ALNPLLANGLLAGMDLSGLQAFQQNLQLTAGLMGLPPSDAGNLAASNLAAMFPMMLSGMA
GLPNLLGMSALLGKNQDGSGGGAEDKDAGTGGGGPAGEPCALGEERTEGGDAPASSQSAS
STSSPPLPLNPLLLSSMLYPGMLLTPGLNLPVANAQPDHKPLPPQSPPPLPQAPAAKVET
LEDNDDDDDDDDESGEPKDQSRKPESSSSESGSSSSSSDDSDSSKE
NT seq
8781 nt
NT seq
+upstream
nt +downstream
nt
atggatttttttgatgaccccaacctctttggtggaggtctggaaggggtggatgttgac
ggcttcccctcagctccatcatttgttgatgagctcagtcttggccctgactttgagccc
atccaagtggagcctctcgccccagggaagaaccaagacatgatgctgcctgtgtcttct
acatccacccagcaagccatccccacttacagtcagcagatgggacattacattggaatt
aagacacagaattccattgggcaatcgttttgtagtactaggggtactggtggcatggca
gcagggcaacagggcgagtaccatgacgcacctgtgagccaactacctcaggccaatggg
ttgttcttcaataatagcagcccaatgtgggggaatcaggaccagactggtcaaatgtat
catcccttgtcccagcaacagcagcaacaacagcagcaactgtacaaccagcaaatcgtc
agacagcaacaaacgcatcatccgcagcagtacagaatgcgtgtgcagcaacgacaaaac
cacccacaacagatatttaaccagaatgagcatcaacaaatgaactttcaagccatatct
ttggagcaacggcatcatcacagttttgcctttcaccaggggaggcagcctcgcagccag
catcaggttccccagagtccacagcaggaccaacaccagctaactgcggtaggaacaagg
tttcattcagcgctcgtgccaagtcaaactgaccttctgccggggtcctgcttgcagcag
caacaaccacgtagcttctcctgtggattacgaatggctgaaaataaccaacccatggat
tcgtcatctttggttcgctcactgcccacttactctgtgagctctatcaacacttaccaa
gctgctcagttcccatcctaccctggagagccagaaatggacagtctcagtcggccgtct
ttgtcgtctgtgtcggcggcagctcgacccaccgctaccaccactccccatgtggcagct
ctgcccaagctctcaggggcggcatgtcagtttccatcctcatcagttaaccaggccgag
gaatgtcatttccgggctttacgctgtcgcggagaaacacgaggaaacaacaagttgtcc
gagatatttggggaatcaatgagctgctacccgagcgtggcccaccacttaccctctgag
cagcctcagcactgtggagacatcaacactaatggatacccgtccctaggggacaatctc
ttggcatcagaggctcaggatgaacatttggcagggttagagcctcccgacctcctgcct
gacttcctgcctcagctggaggccgcgctcagccaaccagatcaatctaactgctcctgg
gtggattctaaccaggcatggggacccgagcacaggacacaaacacctgttggacaaaag
gaagaagagcctcgaaagaacacaaatggtcctgcaagccgggtgctcagtcccgtgatg
aagagcagctcgtcgtcgtcgtcctcttcatcgtcgccgtcatcctcctcttcctcctct
tcgtcatcatcctgttctccgtcggagaagacaacgctccggcagacacaccaccagcag
gactctgcacctctggacaaacaggagaaggccaatcggatcatatcggaggccatagct
aaagcccgacagcgtggcgagaaaaacatcccgaggatcatgagtcctgagagtttccct
agctcatcgtcacagcggaagaaccaccaggatcataaaggaaacagcaaagggcgctcc
aaatttaaagcctcgaggaaggcctgcattgtcccttcctccacgtcgaagcagaagccc
aagatcgggaaaattgtcattaagattgggaagaagaagaagcgaatgcccaactcttcc
gaggaggagtctgatgaggacccttcgccacgacgctcttctaaggactcgaagagacgc
tctaatcgtcaggtcaagagaaagaagtacgcagaagaactggaagccaggctgtcggac
gaggacggcaaggtgatcatcaaagccaagaagaccaacccagcgacatccaagcagcct
gcagtgcagctctttgtggaaaatccaagtgaagaagacgctgctgtcgtggacaaaatc
atgtcctctcgtgtcgtcaagaaagaggtttctccagaggtgctggtggaagtggaagag
ttttttgtcaagtacaaaaactactcctacctccactgtgagtgggccacggagggccag
ctagagaaggacaaaaggatccagcagaagatcaaacgcttcaagatgaaacaggcacag
cgggcactatttttcgccgacatggaagaagagctcttcaacccggactatgtagaggtt
gaccgtgtgcttgaagtgtcttattgcgaggataaagatacaggggaggaagtggtctac
tacttggtgaagtggtgctcgctgccgtatgaggacagcacatgggagctgaaggacgac
gtagatcagagcaaaatagaggagtttgagcaactgcaggcggctaagccagactcgcgc
agggtggagcggcctccagccaatttgtggaagaagagagagcagtcgcgccagtacagg
aacggcaacagcctcagggactaccagctggagggagtcaactggctgctattcaactgg
tacaacaggcgaaactgcatcctggccgacgagatgggcctggggaagacaatccagtcc
ataaccttcttagaggagatctaccgtgtgggcatcaagtcacctttcctaatcatcgcc
ccattgtccacaatcgccaactgggagcgcgagttccgcacgtggacgcacatgaatgtc
attgtgtaccacggcagcatcgtcagcaggcagatgctgcagcagtacgagatgtacgcc
agggatgcgcagggacgtgtgttgcgaggcgcctacaagtttcaggcggtcatcaccacc
ttcgagatgatcttggggggctgtcccgagctcaatgccattgagtggcgctgcgtcatc
attgacgaggcacaccgcctcaaaaacaagaactgcaagcttcttgaaggcttcaagcta
atgagcctggagcacaaggtcctactgactggcactcctctccaaaacacagtggaggaa
ctcttcagcctgcttcacttcctggagccggcacgtttcccctcagagaacactttcatg
caggagtttggagacctcaagactgaagaacaggtgcaaaaactgcaggccatcttgaag
ccgatgatgctgcggcgcttgaaagaggacgtagagaagaagcttgcacccaaggaggag
accatcatcgaggtagagctcaccaacatccagaagaagtactatcgcgccatcctggag
aagaacttctccttcctggccaagggagccggccaagccaacatgccgaatctggtcaac
accatgatggagctcaggaagtgctgcaaccacccctacctcatcaaaggggcagaagag
aagatcttggaggacttcagggaggtgtatagcccagctgccttggacttccacctgcaa
gccatggtacagtctgccggcaaacttgttctcatcgacaaactactacccaagatgaag
gctggtgggcacaaagtgctcattttctcccaaatggtgcgctgcttggacatcttggaa
gactacctcattcagagaaggtacttgtatgaacgaatagacggtcgtgttcgtgggaac
ttgcggcaggcagccatcgaccgcttcagcaagcctgactcagatcgcttcgtattcctg
ctgtgtactcgagctggcggcctgggcatcaacttgacggcggcggacacctgcatcatc
tttgactctgactggaacccacagaatgacctccaggcgcaggcccgctgccaccggatc
ggtcagaataaggcggtgaaggtgtaccgcctaatcaccaggaactcgtacgagcgggag
atgtttgaccgcgccagcctcaaacttggtttggacaaagctgtgttgcaaagcatgagt
ggccgcgacaacagcttgggaggagggggcgctggtggagcaggaggcactgggggaggg
gcggtccagcaacagctgtccaaaaaggagattgaggatctactgcgacgtggtgcctat
ggcgccatcatggacgaggaggacgagggggccaaattttgcgaggaggatatcgaccag
atcctccagcgccgaaccaagaccatcaccattgagtccgagggccgagggtccaccttt
gccaaggccagttttgttgcatctgggaaccgcactgacatctccctggatgaccccaat
ttctgggacaagtgggcaaagaaggcagacattgatatggaaatggccaacggcagaaac
agcctggttattgatacaccccgtgtcaggaagcagacgaggcccttcagctccaccaag
gacgagctggcggagctgtctgagggtgaaagtgacagcgacgacgccaaacccaaagtc
aggcgagcccatgaacggcctaacagctatggacgcacagaatgcttccgcgtggagaag
aacctgctggtatacggttggggccgctggaaagacatcctcaaccacgggcgtttcaag
aagcagctgaccgactgggacgttgaatcaatctgcagggcactactggcctactgcctg
gttcactaccgtggcgatgacaaaatcaaaggcttcatgtgggacttgattgcacccacc
gaagatggccagacaaaggagcttcagaatcacttgggtctgtctgcacctgttcctcgg
ggtcgcaaaggcaagaagatgaaaacccagtccagttcatttgacatccataaagccgag
tggctgcggaagcataacccagagcacatgctgcaggacgacggctacaagaaacacctc
aagcaccactgcaacaaggtgctgctccgggtcagaatgctgtactacctgaaacaagag
gtgataggcgatgaggcccagaacgttttgaacaacgtggatgccagtgagatcaagatc
ttggtgcccgagctggaccactcggaacttccagccttgtggtgggatagcgtctctgac
aagtgtctgctgctaggggtctacaagcacggttatgagaagtacaacaccatccgcgca
gaccctgcgctatgctttctagagcgcgtcggccgaccagacgacaaagccatcgctgcc
gaacagagaagtaacgattttatggacggggatgtggacgatcctgaatacaagcctgca
ccagccctgctgaaggatgacatagaggatgatgcctcctctccgggagacttggttgtc
actgacaaccccggagacgcagttccgggagtagcgagcgcctactggccctcatcttcc
ttgctcactgcccggctaaggcgtctgatcactgcctcccagcggtacacgaagagccgg
cagatcttacaaatccaccaggtgcagttgcagtcccacacccagctggccggcatgtcg
tcgatgccactctgccccccaccaccgtctgcggcgctcctactgccaccggcagttttc
agtgacccgcttaacaccaagatggccgccaagattgaacgtcaacaaagatggacgagg
cgggaagaagctgacttctaccgggtggtgtccacatttggtgtggtcttcaacccgacg
gtgggccgctttgactggacaaaattccgggcaatggcgcggctgcacaagaagacggat
gagagcctacagaagtacctgtgcgcctttgctgcaatgtgccgacgagtttgccgcctg
ccgcccaaagaaggagactcagcagtagacccgtcccttaacatccagcccatcacggag
gagcgcgcatcacgcaccttgtaccgggtggagctactgcggcaggtgagggagcaggtc
cttcgccacccattgctgtacgagcgcctgcaactttgccagataagctctgacttaccc
gcgtggtgggagtccggcacccacgaccgggacctgctcattggtgctgccaagcacggg
gtcagccgcacggattatcacatactcagagatcctgatttgggtttcatggctgcccag
cgcaactacagccagacaaaggccatgctgccacagcagcaacaacaacagttggtaggc
ttcacacctgtcctgcaacctcagtaccagccctcggcagttccactccctaccccaagg
gacttggcgacaggtggggtggtgccaaaagcagagccctcctcagaaggggaggaaagc
agggaaaaagcgaaagaaagctggagtcccgccagagcactggagacccccgcgggagtc
gcagaggacaaacgcgacagcgaggggcagatggtggcagcaaggacaaagcctgtcaca
cccaactctttggaaaggaagcccaagaaggccagcaagagaggccgcagagagaggcgg
ccctctggctccgactcagacggctcgtcatctagctcttcgtcccgttcctcctcctct
tcgtcgtcgacctcctcttcctcatcccgctccgggtccagctcatcttcgtcttcgtca
tcctgctcctctggctcttcgtcatcctcctcctcctcctcaacttcttcggatgacagt
gacagtgaaggagaggacaggaagaagaaagtgcttgcagctccaagcgtgaaggtcttt
gatgaggacagtgtggcgtctttaggcgccacacaccgcgatgcgcaagacactccggcg
ccccagaatggcgtcgccaacaatgcgtcacatcccttccaggcaggaggtttcatgctc
gctgcctcccactggccaaaggaccgcgttatcatcaaccgtctggacagcatttgccag
gcggtgttgaagggcaagtggccagccacgcggcgtgtctatgagcccggtggccccgtg
gcatccttctacaccaccaagctcctggacggcagcctgtgcgaagacccctcggcctcg
ccacaggggtctaaggtgaccgagcatgttgcagaaagcaaggagttctcagtcaagcta
aacgatcaggagggagggctcaagttgaccttccagaaacaggggctccctttgaagaga
cccctagactcggaggaggcaccccaggcccagcagcagcagtatcttgctcggcttcat
gaactgcagaacgcctcagacactgggctggctgacatcacccagccgcagtgcagcttc
cagaacatgccttcaggtctcgctggggcgatgaggctgaacggggtgctggacagccag
ccggtggtgaagaggcggagggggaggaggaagaacgtggagggcgtggacctgcttttc
atgaacaggagtcaagtccctgatcaggcggctcccggatggggcggcatcggccaagtg
ggcatggctccaatgccggggtacaatcaccaggcctcgggaccgagcccggagaacgtg
gagagcagagtaccggtcatcaacctgaaagacggcacccgactggctggggacgacgct
cccaggaggaaagatctgaaccagtggctgcaagaacacccgggctttgtggcagacacg
ggcgccttcatccctggcgtgaacaagatgcctctgcagtttcacgtccaggacgggcga
cccaagcagaagaggcaccgctgcaggaaccccaacaagatcgatgtcaacagcctgacg
ggcgaggagcgtgtgcagatcatcaacaggaggaacgcccgcaaggttggcggagctttt
gcgcctcctctcaaggatctgtgccgcttccttcaggagaacccagagtacggcgtgccg
cctgaatggggcgatgtcgtcaaacagtcgggttacctcccagcgagcatgtttgacagg
atcctaacaggtcccatcgttcctgaggaggtgagccggcgagggcggcgtccaaagaat
cccctcgttaaggcggcgaccatgacgcccaacccggcagcggcagcgtcctccaccctt
gccctcaatccccttctggctaacggcctcctggcgggcatggacctgagcggcctccag
gccttccagcagaacctgcagctcaccgccggcctcatgggcctgcccccctcggacgcc
ggaaacctggcggcgagcaatcttgccgccatgtttcccatgatgctctccgggatggcg
ggactgcccaacctgctgggcatgagtgcgttgcttggcaagaatcaggacggaagcggc
ggaggcgccgaggacaaggacgcaggaaccggtggcggcggcccggcgggagaaccgtgc
gccctcggcgaagaacggacagaaggcggagacgcccctgcttcctcccaaagtgcctcg
tccacctccagccctcccctccctctcaaccctttgttgctgtccagtatgctttaccca
gggatgctcctcactccaggccttaacctccccgtggccaacgcacagcctgaccacaag
ccccttcctcctcagagtccgcctcctcttcctcaagcgcccgccgccaaagtggaaact
ttggaagataatgacgacgacgacgatgacgacgacgagtcgggagagcccaaggaccaa
agcaggaaaccagagtcttcttcatccgagtctgggagctcttcttcttcctcagatgac
tcagactccagcaaggaatga
DBGET
integrated database retrieval system
