Syngnathoides biaculeatus (alligator pipefish): 133498361
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Entry
133498361 CDS
T09681
Symbol
pcdh17
Name
(RefSeq) protocadherin-17 isoform X1
KO
K16499
protocadherin delta 2
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sbia04515
]
133498361 (pcdh17)
Cell adhesion molecules [BR:
sbia04515
]
Cadherins
Protocadherins
133498361 (pcdh17)
BRITE hierarchy
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Sde0182_C
PepSY
Motif
Other DBs
NCBI-GeneID:
133498361
NCBI-ProteinID:
XP_061671069
LinkDB
All DBs
Position
3:26420878..26478687
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AA seq
1139 aa
AA seq
DB search
MYLSSLFFLFLWAEALTLKNLNYSVPEEQGPGTVIGNIAKDARLGLEQNGQGGQGKKANF
RVLENSAPHLIDVDPQSGLLFTKQRIDRETLCKRNPKCQLSMEVFANDKEICMIKIDIQD
INDNSPIFPSDQIDIDISENAVPGTRFPLTSAHDPDAGENGLKTYQITRDDYNLFSLEVK
SRGDGTKFPELVIQRPLDREERSHHTLILSATDGGEYPRSGTMQINVKVIDSNDNSPVFD
QPSYVVEIPENAPPGKVLIDLNATDPDEGNNGQVVYSFSGYAPERIRELFSINSRTGVIK
IQGEIDYEESPVIEIDVQAKDLGPNPIPGHCKVTVKVLDRNDNWPSIGFVSVRQGAISEA
APPGTVIALVRVTDKDSGRNGQLQCRVLGNVPFKLEENYDNFYTVVTDRPLDRESQDEYN
VTIVAKDNGLPPLNSTKSFSVKILDENDNVPRFTKSVYLLQIPENNIPGEFLGSVLAHDP
DLGQNGTVYYSIINSNVSGGDVNTYVNVNAANGAIYAVRSFNYEQIKYFDFKVLARDAGS
PHLESNATVRISVLDVNDNIPVIVLPLLQNDTAEIHVPRNVGVGYIVTTLRAVDNDYGES
GRLTYEISDGNEEHLFDIDPVTGEVRTAHPFWDNVNPTVELIIRVSDHGKPTLTAAARLI
IKASNGHPADGLLHVDDNQNWDMSLPLIVTLSIISIMLLAAMVIIAVKCKRENKEIRTYN
CRIAEYSHPQLGKGKKKKINKNDIMLVQSEVEERDAMNVMNVVSSPSLATSPMYFDYQTR
LPLSSPRSEVMYLKPTSNNLSVPQGHVGCHTSFTGPVTSITDTPTNRMSIIQTDSFPTEP
NYMGSRQQFVQSSSTFKDPERASLRDSGHGDSDQADSDQDTNKGSCCDMSAKEALKLKAT
GVRPPPLEQDEDCLNCTEECRVLGHSDRCWMPQFPAGGNQAEGIDYRNNMFVPAGMESVP
ETETFETVNPNGKKTFCTFGKERRDHTILIANVKPYLKAKRALSPLLQEVPSASVSPVKG
CSTTCSSVKSPADGAECKPPLATCSGYYGPPDGQYLSPTKQTREQGVYPTLPPSDPVAKV
LAEARSRITQESRGEMECVLEQVEPDVSRDGMDADQVVRDIDKLLQDCRGNEATGTLRK
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atgtatctttctagtttatttttcctcttcttatgggctgaagccctgacattgaaaaac
ttgaactactctgttccggaggaacaaggaccaggaacagtaattggcaacattgcgaaa
gatgccagacttggactggaacagaatgggcagggagggcagggaaagaaagctaacttc
agggtgttggagaattcagcaccccatctcatcgacgttgacccccagagtggactactc
tttacaaagcagcgcattgacagagagacattgtgtaagagaaacccaaagtgccagctc
tcaatggaagtgttcgctaacgacaaagaaatctgcatgattaaaatagacatccaagac
attaatgacaactcgcccattttcccttcagatcagattgatattgacatatctgaaaat
gcagttccagggacgcgctttcctttgacgagcgcacatgatccagatgcaggggaaaat
ggcctgaaaacctaccagataacacgcgatgactacaatcttttttctttggaagtaaaa
tctcgcggggatgggaccaagttcccagaattggtgattcaaagaccactggaccgggaa
gaaagaagtcatcacactctcatattgtcagccactgatggtggggaatatccaaggtca
ggcaccatgcaaataaatgttaaagttattgattcaaatgacaacagccctgtatttgac
cagccctcttatgttgttgaaattcctgaaaatgcacctcctggtaaagtcctgatcgat
ttaaatgccacagatcctgatgagggcaacaatggacaagtagtctattcttttagtggc
tatgccccagagagaatccgggagctgttctcaataaattccagaacaggggtcataaag
attcagggtgaaatagactatgaggagagccctgttattgagattgacgtccaggcaaag
gacctcggacccaatccgatcccaggccattgtaaagtgactgttaaagtgctagacagg
aatgataactggccctctattggctttgtgtccgtaagacagggagccatcagcgaagca
gcaccaccaggcactgttattgcactggttcgtgtcacagacaaggactctggcaggaat
gggcagcttcaatgcagagtgctgggtaatgtccctttcaaactagaggagaactacgat
aacttctacacggtggtgacagacaggccactggacagagagtcacaagatgagtataat
gtcaccattgtggccaaagacaatggtctcccgcctctaaattccaccaaatccttctct
gtaaagattttggatgagaatgacaatgtcccccgctttaccaagtcagtttacctcctc
cagataccagaaaacaatattccaggggagttcttggggtcagttcttgcccatgaccca
gatttaggccagaacggcacggtgtactacagcattattaactccaatgtgagtggaggt
gatgtcaatacttatgtaaatgtgaatgccgccaatggagccatatatgcagtaaggtca
ttcaactatgagcaaatcaaatattttgatttcaaggttcttgcccgagatgcaggctca
ccacacttggagagcaacgctacagtgcgcatcagcgttctggatgtcaatgataacata
ccggtcattgttctaccccttctgcaaaatgatactgctgaaatccatgtaccacgcaac
gttggtgttggctacattgtgaccactttgagagcagtggacaatgactatggcgagagt
gggaggctcacgtatgagatctcagatgggaacgaagagcacctttttgatatagatcca
gtgactggcgaagtgcgaacagcccaccctttctgggacaatgtaaatcccactgttgaa
ctgatcatccgtgtgtcagatcatggcaagccaaccctcactgctgctgctaggcttatc
attaaagcctccaatggacatcctgctgatggactgctgcatgtcgatgacaatcagaac
tgggacatgtcactgcctctcattgtaactctcagtataatatcaatcatgcttctggct
gccatggtcatcatagcggtcaagtgcaagagggaaaacaaggagatacgaacctataac
tgtcgaattgcagaatattcccatccgcagctggggaaaggcaagaaaaagaagattaac
aagaatgacatcatgttggtgcagagcgaggtggaggagcgggatgccatgaatgtgatg
aatgtggtaagcagtccttccttggccacttctcccatgtactttgactaccagacacgc
ctgccactcagctcaccaagatcagaggtcatgtaccttaaacccacttccaataacctc
agcgtgccccaaggccacgtgggatgccacaccagcttcacaggcccagtcaccagcatt
acagacacacctactaaccgcatgtccatcatacagacggacagtttccccactgagcct
aattatatgggaagtagacaacagtttgttcagagcagttccacatttaaagacccagaa
cgagcgagcctccgagacagcggccatggtgacagtgaccaggctgacagtgaccaggac
accaacaaaggctcctgctgtgacatgtctgcaaaggaagcgcttaaattgaaagctaca
ggcgttaggccgcctccgttggaacaagatgaggactgtttgaattgcactgaggagtgc
cgagtcctgggtcattctgaccgctgctggatgccacagttcccagcaggaggaaaccag
gcagagggtattgattaccgcaacaacatgtttgtgccagcagggatggaaagcgtgcca
gagacagagacctttgagactgtcaaccccaatggcaaaaaaacattctgcacatttggc
aaggagcgccgtgatcacaccatcctcatagcaaacgttaagccctacttaaaggcaaaa
cgggccctcagcccactgctccaagaggttccgtcggcatcagtgagtccagtcaagggg
tgttccaccacttgttcctcagttaagagtccggctgatggggctgaatgcaaacctcct
cttgccacctgctccggctattatggccctcctgatggccagtacctgtcgcccaccaaa
caaaccagggagcagggggtctacccaacgttgcctccttcagacccagtggccaaagtg
cttgctgaagcccgctccagaatcactcaagaaagcagaggagaaatggagtgtgtgctg
gagcaggtggagcctgatgtgagccgtgatggaatggatgctgaccaggtggtcagagac
attgacaagcttttgcaggactgcagaggaaatgaggccactggcaccctgaggaagtga
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integrated database retrieval system
