Syngnathoides biaculeatus (alligator pipefish): 133498375
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Entry
133498375 CDS
T09681
Symbol
rbm26
Name
(RefSeq) RNA-binding protein 26 isoform X1
KO
K13192
RNA-binding protein 26
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sbia01009
]
133498375 (rbm26)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbia03019
]
133498375 (rbm26)
03041 Spliceosome [BR:
sbia03041
]
133498375 (rbm26)
Protein phosphatases and associated proteins [BR:
sbia01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
133498375 (rbm26)
Messenger RNA biogenesis [BR:
sbia03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
133498375 (rbm26)
Spliceosome [BR:
sbia03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
133498375 (rbm26)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
PWI
Nup35_RRM_2
RRM_Nup35
zf-CCCH
zf_CCCH_4
RRM_3
COG5_N
Motif
Other DBs
NCBI-GeneID:
133498375
NCBI-ProteinID:
XP_061671092
LinkDB
All DBs
Position
3:complement(27859606..27885581)
Genome browser
AA seq
1043 aa
AA seq
DB search
MIIENLDALKAWLSNTLEPICDADPSALAKYVVALVKKDKTEKELKALCIDQLDVFLQKE
TQQFVDKLFEAIDSKSYLPQTEPLPTLVKVEKDDPKKDEANREERDKKFSRRVNNSPPPS
SSRYSRDGRRVDDRKRDDRSRKRDYDRNPPRRDSYRDRYNRRRGRSRSYSRSRSRSWSKD
RTRDRDRDRDRDRERDRERDRDRPRSGSPSHSRTHSRSRSRERDPGKLKYDHDRVDRLEG
ADGFTTAVLVSTATTSHFPVPTLSSTITVIAPTHHHSNNTTESWSDFHPELPVDRGPFRG
PLPQPRKRCRDYDEKGFCMRGDMCPFDHGSDPVVVEDVGLPNMLPFQPPPIPGVDGPPPP
GLPPPPLLNPPPVNLGPPVPPPGTLPPSLPPVAGHDVHNLKKQIEMWTRQTTEDFSTLHQ
SILDRGPPPPLPPLQPSGMDAPPNSITSAVPTIVTSGMRSSMPQMPTPLFPPDTYETDVY
NPEAPSITSSSRPVYRHRVNAQRPNLIGLTMGDVDELQKDKVPNSSMRIVMDSGLRKRPA
GSHDGGILHKKPWFDRPNYNKPNHLGYIRRGPFNSPNTKLLVRQIPSDLNNISKLNDHFS
KFGTIVNLQVAYQNDPEGALIQFASPDEAKRAIQSTEAVLNNRFIRVHWFRENGGDGPGQ
ILSHVQQLQSQPAMPLATSLKQSVKDRLGPLLTVNSESSQDSSITSQNTAKVSVKDRLGF
TAKPAPVEKVFSTSAGLSKTVYNPAALKAVQKTTDDSLKKKQEALRLQQDVRKKKQEILE
KHIETQKLLISKLEKNKTMKAEDKAKIMETLDTLTKSITKLQEEIKVISNSSNNLLHTVK
SKAQAQKELLDTELDLYKKTQAGEDTALLKIKYTQLQIEAAKRGLLSPGRGRGISARGRG
APRARGRGARGRGRGVPQHAVVDHRPRALEITGFTDTERVDLLPHFAQFGEIEDCQIEEN
SFSAVITYRTRAEAEQAALHGIKFNNRNLHLAWHKPAMTLNAADANEAEPEEDEFPEESL
SDDPLLQDDDEEEDDNEPRSWRR
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atgatcattgaaaatctggatgctttgaaagcatggctctctaacacactcgagcccatc
tgcgatgcagacccatcagcactcgccaagtatgttgttgccctggtaaaaaaagacaaa
acggagaaagaactgaaagctttgtgtatcgaccagttggatgtgtttctccagaaagaa
actcagcaatttgtggacaagctgtttgaagctatagacagcaaaagctatctgcctcag
acggaaccactacccactttggtcaaggttgagaaagatgatcctaaaaaagacgaggcc
aatcgagaagaacgtgacaaaaagttttctcgaagagtgaataacagccctcctccctcc
agttcccgctacagtagagatggcaggagagtagatgatcgtaaaagagatgaccgttcc
aggaaaagggattatgaccgcaacccgcccagaagggattcttaccgtgatcgatacaat
cggaggaggggtcgcagtcgtagttatagtcgcagccgcagcaggagttggagcaaggat
cgtactcgagaccgggatcgagaccgcgaccgggatagagaacgggacagagaacgtgat
cgggacagaccacgaagcgggagtccttctcacagcagaactcattcgagaagcaggagt
agagaacgggatcctggaaagttgaagtacgatcacgatcgagtggacaggttggaaggg
gctgatggtttcaccacagctgtcctggtttccactgcaaccacctcccattttcctgtg
ccaacactgagcagcaccattacagtcattgcacccactcatcatcacagcaacaacaca
actgaaagctggtcagatttccacccagagctccctgtagatcgtggtcctttcagaggg
ccccttcctcaacccaggaaacggtgccgtgactatgatgagaaaggcttctgcatgaga
ggagacatgtgccctttcgaccatggaagtgacccagttgtagtggaggatgtgggattg
cccaatatgctccccttccaacctccacccatcccaggtgtggatggccctccgccccca
ggccttccacctccaccactactgaaccccccacctgtgaatctggggcctcctgtgcct
ccaccaggcactctaccaccaagccttccgccagttgcaggacatgatgtccataattta
aaaaaacaaattgaaatgtggactcgtcagaccacagaagacttttccactttgcatcag
tccatcttagatagaggaccaccgccacctcttcctccacttcaaccatctggaatggat
gcacctccaaattccattacgagtgctgttcccactattgtcacttctggcatgcgctct
tcaatgccccaaatgcctacaccacttttccctccagatacctatgagactgatgtgtac
aaccctgaggctcccagtatcactagtagctccaggccagtgtaccgccaccgcgtcaat
gcccagaggcccaacctgatcggcctcactatgggggatgtggatgagctacagaaagac
aaggttccaaacagcagtatgagaattgttatggattctggcttgaggaagagacctgct
ggttcacatgatggaggcattctccacaagaaaccatggtttgacaggcccaattataac
aaacccaaccacctgggctatattagaagaggtccctttaactctcctaacaccaagctg
ctggtccggcaaattccctctgatctcaacaacatcagcaaactcaatgaccattttagc
aagtttggaaccatcgtcaacctgcaggtggcctaccagaatgacccagagggtgcactg
atacagtttgcatccccggatgaagccaagcgtgccatacaaagcacagaggctgtcctc
aacaaccgctttatcagagtgcattggttccgggagaatggaggtgatggaccaggacag
attctgtctcatgtacagcagttgcagtcacagccagccatgcccttagcaacatcgctg
aagcagtctgtcaaagatcgccttgggcctcttctcactgtaaattctgagtcttcacag
gactccagcataacttctcagaacactgcaaaagtctcagtgaaggatcgtttgggtttc
actgccaaacctgctcctgttgagaaggtgttttcaacgtctgcgggcctctcaaagact
gtatataatcctgcagccttaaaagctgtccagaaaaccacagatgactctctaaagaag
aaacaggaagcccttcggctacaacaggatgtacggaagaagaagcaggaaatactggag
aagcatattgaaacacagaagctcctgatctccaaacttgagaagaacaaaacgatgaaa
gctgaggataaagccaagatcatggaaaccttggacactttaaccaagagcatcaccaaa
ttacaagaagagataaaagtcatctcaaacagcagcaacaatttattgcacacagtcaag
agcaaggcccaagctcagaaggaacttcttgatacagagctggacctgtacaagaagact
caagctggagaggacactgctttgttgaagattaagtatacgcagctgcagatagaggct
gccaaaagaggtctgctgtctccaggtcgagggcgtgggatctcagctcgagggcgtggc
gctccaagggcccgtggaagaggtgccagagggcggggaagaggtgttccacagcatgca
gttgtggaccatcgacctcgtgctttggagattactggtttcactgacacggaacgggta
gaccttctaccacattttgcgcaatttggagaaatagaagattgccagattgaggaaaac
agtttttctgcagtcatcacctacaggacaagagcagaagcagaacaggcagccctccat
ggcatcaagttcaataaccgtaatttacacctggcctggcataagcctgccatgacgcta
aatgctgcggatgccaatgaggcagagccagaggaggatgagttcccagaagagtcactg
agcgatgatcccttgctgcaggacgacgacgaggaggaagacgacaatgagcctcgctcc
tggcgcagatga
DBGET
integrated database retrieval system
