Syngnathoides biaculeatus (alligator pipefish): 133498398
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Entry
133498398 CDS
T09681
Symbol
trpm5
Name
(RefSeq) transient receptor potential cation channel subfamily M member 5 isoform X1
KO
K04980
transient receptor potential cation channel subfamily M member 5
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
sbia04040
]
133498398 (trpm5)
Ion channels [BR:
sbia04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
133498398 (trpm5)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LSDAT_euk
LSDAT_prok
Ion_trans
SesA
Motif
Other DBs
NCBI-GeneID:
133498398
NCBI-ProteinID:
XP_061671137
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Position
3:complement(28644064..28703809)
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AA seq
1213 aa
AA seq
DB search
MLGRQDNFLGLQPKTKCLGFGDKLEWSQDPHVLHSCSCSSTEDETSQNISRDHKSTRMKN
HWPSGRVGDIDFIGASKTKGKFMRVKSNTDPAHIFQMLTEEWGLAPPHLVVALVGGDELA
QMKPWLRDTLRKGLVKAAQSTGAWILTNGLRFGITKHLGQAVRDHSLASTSTKVRVVAIG
IAPWNMIHNRESLLSAKLGGPAVYKPQDLPHGSVYSLDSHHSYFVLVEDDPNRPDTTGEM
RVKLLKHISLQRTGYGGAGSFEIPVLCLLVHGEPRILKRICKGIDNSTPWLILAGSGGVA
DILVTLVNRGCWDKDSVHELLLDTFPNAYYSTAIRNWVKLIQKILDHGHLLTVHDPEQES
SELDTVILKALVKACKSQSQEAQDFLDELKLAVAWNRVDIAKSDIFSGDVQWKACDLEEV
MMDALINDKPDFVRLFVDNGVNLGEFLTYGRLQELYSSVSEKSLLHNLLLKKYEEKQHLL
GNARTPGPLGQHTSEQGERKPRFTLYEVAKVLKDFLHDSCKGFYQKSPTEKPAKGRLFHS
QKNLAELEECCQHPWRDLFLWAILQNRQQMANYFWAMGPEAVAAALAGCKILKEMARLES
EAESARSMKEAKYEQFALDVFGECYSNSEDRAYALLVRRTQCWSKSTVLNLATEADAKSF
FAQDGVQALLTKIWWGAMTTDTAISKLVVSFFCPPLIWTNLIKFCDEEMDNQNSEEPYVD
LDSLDTEKVLLLSDEDGPTDSLPGAPADQSCASVWWRFLLCRWRRFWSAPVTVFLGNVIM
YFAFLFLFTYVLLLDFLPPPPIGPGVPEIMLYFWVFTLVLEELRQSFFSDEEMNILKKFK
LYVEDNWNKCDMVAISLFVIGVSCRMFDDTYEAGRSVLAIDFMVFTLRLIHIFAIHKQLG
PKIIIVERMMKDVFFFLFFLSVWLIAYGVATQALLHPHDHRIDWVFRRALYRPYLHIFGQ
IPLEEIDAARMMEINCTNDSEEIIKGLQQPCPNVYANWLVILLLVIFLLVTNVLLLNLLI
AMFSYTFQVVQGNTDIFWKFQRYNLIVEYHSRPALAPPFIIISHLSQLLLSQVKQPESKQ
DHLERKLPARLDQRLITWETVQKENYLAKLERQQWESSEERLRSTSSKVQNMLRIISGVK
DQDKRLATMEAQVRYCGEVLSWMAECFALSTLKCGKEAPTAPSCMGSNDAHQNQLKMENK
CAKGCSYNDQERK
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgctggggagacaagacaattttcttggactgcagccgaagacaaaatgcctgggattt
ggggataaactggaatggtcacaggacccccatgtcctccacagctgttcatgctcctct
acagaagatgagacatcgcagaatataagtagagaccataagagtaccagaatgaagaat
cactggccatctggaagagtgggggatattgactttattggggcctccaaaacaaaggga
aagtttatgagggtgaagagcaatactgacccagcgcacatcttccagatgctaacagag
gagtggggacttgctcctccacacctggtagttgcactagtgggaggagatgagttggct
caaatgaagccttggctcagggacacactcagaaaaggtcttgtgaaagctgcacaaagc
acaggggcatggattttgactaatggtcttcgatttggcattaccaagcacctgggtcaa
gcggtacgagatcactccttagctagcacttctacaaaagttcgtgttgtggccattggc
attgcaccctggaacatgatccacaaccgagagtcactactcagcgccaagttgggtggg
ccagcagtatacaagccacaggacttgccccatgggtcagtttattcccttgacagccac
cactcctattttgtacttgtggaggatgatccaaacagacccgacaccactggtgaaatg
agagtaaagctgctcaagcacatctctcttcagcgcacaggatatggaggtgcaggaagc
tttgagatccccgttctatgtctattggtccatggcgaacctcggatcctaaagcggatc
tgtaaaggcattgacaattcgacaccgtggcttattctagctggctcaggaggagtggct
gacatcctcgtcacacttgtgaacaggggctgctgggataaagacagtgttcacgaactg
ctgctggacacctttccgaacgcctactacagcacggccataagaaactgggtcaagctg
atccagaaaatactggatcatggtcatctcctcacggtccatgacccagaacaagagagc
tctgagctggacacggtcatcctcaaagctctcgtcaaagcttgcaagagtcaaagtcag
gaagcccaagactttcttgatgagttgaagttggctgtagcgtggaaccgagtggacatt
gccaagagtgacatcttcagtggagatgttcagtggaaggcatgcgaccttgaagaagtg
atgatggatgcgctcatcaacgataagccagactttgtacgtctctttgttgacaacggc
gttaacctgggcgagttcctcacctacggacgtctgcaagaactttactcgtccgtgtcg
gagaagagtctcctgcataacctacttctcaaaaaatatgaggagaagcagcatttgctt
ggcaatgcaaggacacctgggcctcttgggcagcacacatctgaacagggggaaaggaag
ccccgtttcactctttatgaggttgccaaagtgctcaaagactttcttcatgactcctgc
aaaggcttttaccaaaaaagtcccacagaaaagccagctaagggtcgattgttccacagc
cagaagaacctggctgaattggaagaatgttgccaacatccttggagggatcttttcctc
tgggccatccttcagaaccgacagcagatggctaactacttttgggccatgggccctgag
gcagtagcagcagcattggcagggtgtaagattctgaaagagatggcaagacttgagtct
gaggctgagtcagcccgtagcatgaaggaggccaaatacgaacagtttgcccttgatgtg
tttggagagtgttattcaaacagtgaagacagagcttatgcattgttagtaaggagaaca
cagtgttggagcaaatctacggtcctcaacctggcaactgaggctgatgccaagtctttc
tttgctcaggatggcgttcaggctctcctgacaaagatatggtggggagcaatgacaaca
gacacagccatctccaagcttgttgtgtctttcttctgtccacctctcatttggactaac
cttatcaagttctgtgatgaagagatggataatcagaacagtgaagaaccctatgtggat
ttggacagtttggacacagaaaaagttttactgttaagtgatgaagatggcccaacggac
tctttacctggtgctccagcagatcagagctgcgcatcagtttggtggcgtttcttactt
tgtcgctggcgtcgcttctggagtgctcctgtaactgtgttccttggtaacgtcatcatg
tattttgccttcctgttcctcttcacctatgtgctactgctggactttcttccaccaccc
cccattggtcctggagtcccagagataatgctatacttctgggttttcactttggttctg
gaagaacttcgacagagcttcttttcagatgaagagatgaacattttaaagaagttcaag
ctctatgtggaggacaactggaacaagtgtgacatggttgcaatttcactttttgtaatt
ggagtttcatgccggatgtttgatgacacctacgaggcaggaaggagtgttctggcaata
gacttcatggtattcacgctgcggttgatccacatctttgccattcataagcagttgggg
ccgaagatcattattgtggaaagaatgatgaaggatgtctttttcttcctcttcttcctg
agtgtgtggctcattgcatacggggtggcgacgcaggctcttctgcaccctcatgaccac
cggatcgactgggtgttccgcagagccttgtatcgtccctacctgcacatttttggtcag
attcctttagaggaaatagatgctgctcggatgatggaaattaactgcaccaacgactca
gaggagattatcaagggcctacagcaaccatgtcctaatgtctatgccaactggctggtg
attctccttctggtcatcttccttcttgtgaccaatgttcttctgcttaacctacttatt
gccatgtttagctacacattccaggttgtacagggcaatactgatattttctggaagttt
cagaggtacaacctgatcgttgagtatcacagccgcccagccctggctccacctttcatt
atcatcagccacctctcccagcttctcctcagtcaggtcaaacagcctgagtccaagcaa
gaccatctcgagcgaaagctaccagctcggcttgaccagaggctgataacatgggagact
gtacagaaagaaaactacctggccaaacttgagcgtcaacaatgggagagcagtgaggag
cgactaaggagtacatcatccaaggttcagaatatgctcaggattatcagtggtgttaag
gaccaagacaaacgtctggcaaccatggaggctcaagttagatactgtggcgaggtgttg
tcttggatggcagaatgctttgctctgagcacactaaaatgtgggaaagaggctccaact
gcaccgagctgcatggggagcaatgatgcccatcaaaatcaactgaagatggaaaacaaa
tgcgcaaaaggttgtagttacaatgaccaagaaagaaaataa
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