Syngnathoides biaculeatus (alligator pipefish): 133498449
Help
Entry
133498449 CDS
T09681
Symbol
neo1a
Name
(RefSeq) neogenin 1a isoform X1
KO
K06766
neogenin
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04350
TGF-beta signaling pathway
sbia04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
133498449 (neo1a)
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
133498449 (neo1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
sbia04515
]
133498449 (neo1a)
Cell adhesion molecules [BR:
sbia04515
]
Immunoglobulin superfamily
DCC/UNC5 family
133498449 (neo1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
ig
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
V-set
Interfer-bind
NDNF
fn3_2
Tissue_fac
SusE
Sp38
EphA2_TM
DUF4834
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
133498449
NCBI-ProteinID:
XP_061671259
LinkDB
All DBs
Position
3:complement(30130980..30361284)
Genome browser
AA seq
1541 aa
AA seq
DB search
MAERGALWLLSLLSGLTFLSTAAKHVDKGVNVSVNLIMCPVIDWQPVQTVPRLLPVDSWN
RMPRDPCEDKELRKSSGAEPFSPFWFTVEPQDTVAIRGNSALLNCSVHRDAAAAARMEWK
KDGTFMSLVSDERRRILPDGSLLFTHVVHSKHNKPDEGTYQCVATIENLGSISSRTAHLF
VAGMPRFASQPEPSTVRQGDSQVMACEVNSDMVPFTRWEKDRQPLELNLRLVQLPSGALV
INNATENDSGLYRCMVDNVGSSKSSEEAQLQILPETGEERKPEFLVRPVPVTKVMGASVL
LPCVATGFPTPHMRWMFKDKLLEESEGRRELLGGGSLQISNLTEDDAGIYTCVADNTNVT
IEAQAQLTVQVPPQYVKRPSNIYAHESMDIVFECEVTGSPAPTVKWVKNGDAVIPSDYFK
IIKEHDLQVLGLVKSDEGFYQCLAENDAGNIQSSAQLIILDHDVALPPLPPPSLTPNTTD
HVTPGFGGVAGPAGPTPSAPRDVVASLVSTRFIKLTWRPPAEPHGDELTYSVFYSLEGTS
RERVINTSRPGELQVTIQNLMPDTKYRFRVVAHNVNGQGESSAGLKVATQAEVQVPGPAP
NLQATSNTPTSVTLSWEKPLTGNGEVLSYKVYYTDKSFGNEQDVDVNGLSYTMTGMKKNT
QYSFRVVANNKHGPGVSTDDIMVRTLSDVPSAPPQNFTLEVQNSKSIMLRWQPPPSNSQN
GEITGYKIRYRKGSRRSETAETTGGTQLSKLIDGLERGTEYSFRVSATTVNGTGPATDWT
TTETFESDLDESRVPDQPSSLHVRPLVNSIVVSWTPPENQDIVVRGYSIGYGIGSPHAQT
IKVDYKQRYYTIENLDPSSHYVITLKAFNNVGEGIPVYESAITRPQSDPIDPDVDLYELF
HAPYTPVPDPSPMMPPVGVQASVLSHDTIKVTWADNSLPKNQKITDNRYYTVRWKTNIPA
NTKMKMANTTSLNHVVTGLKPNTLYEFSVMVTKGRRSSTWSMTAQGTTFETIPSSSPKDV
TVVSKENKPRTIIINWQPPSEANGKITGYIIYYSTDVNAEDHDWVVEPVVGNRLTHQIQD
LTLDTTYYFKIEARNSKGMGPTSEAVQFRTPNTSNLPSKPGPPGNQLPLDPGSAVGKSGM
GNSENHILVIVIIISVGAFTIIVVVVGAFLCTRRTTSHQKKKRAASKSSNGSHKYKGNSK
DLKPPDLWIHHERLELKPMDKSPEPNPVMTETPIPRTSQDITPADSGMDNNAHLQQRRNS
YRGHESEDGMSTLAGRRGMRPKMMMPFDAQPPQPVISAHPIHSLDNHQHHYHMGSLASPT
RSYLYHQGSGHPRPHACSPISHQNSVDATESVRNTPCSESLPPAALSSQASCPSEILPEP
EGSYHGSTTTEEESCYTSNLPPLRLAHPHAHAHPLKSFAVPAIPATSHPCFESPALPSTP
LLAQTGPPTHPHVVKTASIGTLGRTRTPMIVNVPNAPDVPETSKMLEDVDSVLASLPPCP
SPAPRSNPVPLPQSYEPDELTEEMAHLEGLMKDLNAITTAP
NT seq
4626 nt
NT seq
+upstream
nt +downstream
nt
atggccgagcggggagctctgtggctcctctctctcctgtccggtctcacctttctgagc
acggcggctaagcatgtcgacaaaggtgtcaatgtgagcgtgaatttgattatgtgccct
gtgattgactggcaaccagttcagactgtaccccgcctcctgcccgttgacagctggaat
agaatgccccgtgacccttgtgaggataaggagctaagaaaatcatcaggagcagagcct
ttcagcccattctggttcacggtggagcctcaggacacagtggccattcgggggaactct
gcactgctcaactgttcagtacacagagatgcagccgcagcagctcgcatggagtggaag
aaagacggtacattcatgagtctggtttcggatgagagacggcgcatacttcctgacggc
tccctactcttcacccatgtggttcactcgaagcacaacaaacctgatgagggtacctac
caatgtgtggctaccattgaaaacctaggatccatttctagtcggacagcgcacctcttt
gttgcaggaatgccgaggttcgccagccagccagaaccttccaccgtgcgtcaaggtgac
agccaagtaatggcctgtgaggtcaactcggacatggtgcccttcacccggtgggaaaaa
gaccgtcaacccctggagctgaacttgaggctggtccagctaccaagtggtgccttggtg
atcaacaatgctacagaaaacgattctggtctttaccgttgcatggtggataatgtggga
tcctcaaagtccagcgaagaggcacagctccaaatcctgccagaaactggagaagagagg
aaaccagaattccttgtacggcctgtgcctgtgacaaaggtgatgggtgccagtgttctg
ctgccttgcgtggccacaggttttccaacaccacacatgcgatggatgttcaaagataaa
ctactagaagaaagtgaaggccggagggaattgctcggaggtggcagtcttcagatttca
aatctcacagaggacgacgctggcatctacacttgcgtggctgacaacaccaatgtaaca
atcgaagcacaggctcaactcactgtgcaagttcctccccagtatgtgaagaggccgtcc
aacatttatgcccatgagtccatggacattgtgtttgagtgtgaagtcacaggttcacct
gctccgactgtgaaatgggtgaagaatggcgacgctgttattccaagcgactacttcaaa
attattaaagaacatgacctacaagttctgggcttggtcaaatctgatgagggtttctac
cagtgcctcgcagaaaatgatgctggaaacattcagtccagcgctcaactcatcatcttg
gatcacgacgtagctcttccccctctccctcccccctcactgactcctaacactactgac
catgtaacgccaggctttgggggtgtagctggtccagcaggacccactccctccgccccc
cgcgatgtcgtggcttcgctggtttccacccgcttcatcaagcttacctggcgcccgcca
gctgaaccgcacggagatgagctaacctactctgttttctacagcctggaaggcacaagc
agggagcgagtcataaatacaagccgaccaggggaattgcaggtcaccatccagaacctg
atgccagacaccaaatatcgctttcgggttgtggcccacaacgtcaatggccaaggagaa
agctctgccgggctaaaggtggccacccaggctgaagttcaagttcccggcccggccccg
aatctgcaggcgacatcgaatacaccaacctctgtcacactcagttgggaaaagcccctc
acgggtaatggagaggtcctcagctacaaggtgtactacactgataaaagttttggcaat
gaacaggatgttgatgtcaatggcctgtcatacaccatgacagggatgaagaaaaacaca
cagtacagtttccgtgtggtggccaacaataagcatggtccaggtgtctccactgatgac
ataatggtccgcacgctgtctgacgtgccaagtgctcctcctcaaaatttcactctggag
gtccagaactcgaaaagcatcatgcttcggtggcagcccccaccctcaaattcccagaat
ggagaaatcacaggatacaagatacgataccgtaaaggatctcggagaagtgagacagca
gagaccaccggggggacccagctatccaagctcattgatggtctggagcgtggaacagag
tattccttccgggtgtctgccacaacagtgaacggaacaggcccagccacggactggact
acaacagagacatttgagagtgacctagatgaatcacgtgtcccagaccaacccagctcg
cttcacgtccgtccactggtcaacagcattgtggtgagctggacgccaccagaaaaccag
gacattgttgtacgtggctacagcattggctatggcattggcagccctcatgctcagacc
attaaagtagattacaagcagcgctactacaccattgaaaaccttgatcccagctcccac
tatgtaatcacactcaaggccttcaataacgtgggtgaggggattcctgtatatgagagt
gccatcacaaggccacagtctgaccccatagaccctgatgttgacctgtacgaactcttc
catgctccatacaccccagtaccagatcccagccctatgatgccacctgtgggtgttcag
gcttccgtgctgagccacgacaccatcaaggtgacctgggcagacaactcgctacccaag
aaccaaaaaatcacagataaccgctactacacagtgcgctggaagactaacatccctgcc
aacactaaaatgaagatggctaacaccaccagcctgaaccacgtggtgacagggttgaag
cccaacacattgtatgagttttccgtcatggtgaccaaaggccgacgcagcagcacatgg
agcatgacagcccagggaaccacgtttgaaaccattcctagttcctcccccaaagatgtg
actgtcgtgagcaaagagaacaagcctcgtaccatcatcatcaactggcagcctccctct
gaggccaatggaaagatcactggttacatcatctactacagcacagatgtcaatgctgag
gaccatgactgggttgtcgaacctgtggtaggcaaccgcctgacccaccagatccaagac
ctgactctagacacaacatactacttcaagattgaagctcgaaactcaaagggcatggga
ccaacctctgaggctgtgcagtttagaaccccaaatacctcaaatcttccatcaaagcct
ggacctccaggcaaccaacttccccttgatcctggatcagcagttgggaaatcggggatg
ggaaacagtgaaaatcacatcctggtcatcgtcatcatcatctcagtgggagcgttcaca
attattgtggtggtcgtgggggccttcctgtgtacacgccgcaccacgtcacaccagaaa
aagaagcgggcggcctctaagtcctccaacggctcacacaaatacaagggcaactccaag
gacctgaaaccacccgatctgtggatccaccatgagcggcttgaactcaaaccaatggac
aagtcaccagagccaaacccagtcatgaccgaaacaccaatcccccgcacttcccaagac
ataactccagctgacagcggcatggacaacaacgcccacctgcagcagaggcgcaactct
taccgtggccatgagtcagaggacggcatgtcaacccttgcaggtcggcgggggatgagg
cctaaaatgatgatgccttttgacgcgcagccgccacagcctgtaattagtgctcatccc
atccattccctcgataaccatcagcaccattatcacatgggcagcctggcgtcacccacg
cgcagctacctctaccatcaaggcagtgggcatccccgcccgcatgcctgcagccccatc
tcccatcaaaacagtgtggacgccacagagtcggtgaggaatacaccttgctcagaatct
cttcctccagccgcgttgtcctcgcaggcctcctgcccctcagagatccttccagagcct
gaaggcagctaccacggctccaccaccacagaggaggagtcctgctacaccagcaacctg
ccgcccctccgcttggcccacccgcacgcccacgcacaccctctgaagagttttgcggta
cctgccatcccagccacgagccacccttgctttgagtctcctgccctccccagcactccc
ctcctagctcagactgggcctcccacacacccacatgttgttaaaaccgcatccattggg
actctaggaaggactcgcacgccgatgatcgtcaatgtgcccaacgcgcctgacgtgcca
gagacgagcaagatgctggaggacgtggatagtgtgcttgcctccctgcccccctgcccc
tctcccgcccctcgcagtaaccctgttcctctccctcagagctacgagcccgacgagctg
accgaggagatggcccacttggagggcctcatgaaggacctcaacgccatcaccacagca
ccatga
DBGET
integrated database retrieval system
