KEGG   Syngnathoides biaculeatus (alligator pipefish): 133498506
Entry
133498506         CDS       T09681                                 
Symbol
polr2l
Name
(RefSeq) DNA-directed RNA polymerases I, II, and III subunit RPABC5 isoform X1
  KO
K03007  DNA-directed RNA polymerases I, II, and III subunit RPABC5
Organism
sbia  Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03020  RNA polymerase
sbia03420  Nucleotide excision repair
sbia04623  Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:sbia00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    133498506 (polr2l)
  09124 Replication and repair
   03420 Nucleotide excision repair
    133498506 (polr2l)
 09150 Organismal Systems
  09151 Immune system
   04623 Cytosolic DNA-sensing pathway
    133498506 (polr2l)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sbia03021]
    133498506 (polr2l)
   03400 DNA repair and recombination proteins [BR:sbia03400]
    133498506 (polr2l)
Transcription machinery [BR:sbia03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     133498506 (polr2l)
  RNA polymerase III system
   RNA polymerase III
     133498506 (polr2l)
  RNA polymerase I system
   RNA polymerase I
     133498506 (polr2l)
DNA repair and recombination proteins [BR:sbia03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      133498506 (polr2l)
SSDB
Motif
Pfam: RNA_pol_N
Other DBs
NCBI-GeneID: 133498506
NCBI-ProteinID: XP_061671433
LinkDB
Position
3:32578488..32581399
AA seq 85 aa
MWWHIMEPSRAAFRGVLKMIIPVRCFTCGKIVGNKWEMYLGLLQAEYTEGDALDALGLKR
YCCRRMLLSHVDLIEKLLNYAPLEK
NT seq 258 nt   +upstreamnt  +downstreamnt
atgtggtggcatataatggagccaagccgtgctgcttttaggggtgtcttgaaaatgatc
atcccagtgcggtgcttcacatgtggaaagattgtgggtaacaagtgggaaatgtacctt
ggcctcctccaggcagagtacactgagggtgatgcacttgacgccctgggcctgaagcga
tattgctgtcgaaggatgctcctgtctcatgtggatcttattgaaaagttgttgaattat
gccccgctagaaaagtaa

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