Syngnathoides biaculeatus (alligator pipefish): 133498563
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Entry
133498563 CDS
T09681
Symbol
efl1
Name
(RefSeq) elongation factor-like GTPase 1 isoform X1
KO
K14536
ribosome assembly protein 1 [EC:3.6.5.-]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
133498563 (efl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sbia03009
]
133498563 (efl1)
Ribosome biogenesis [BR:
sbia03009
]
Eukaryotic type
Pre-60S particles
GTPases
133498563 (efl1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFL1
EFG_C
EFG_III
EF-G_D2
GTP_EFTU_D2
EFG_IV
MMR_HSR1
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
133498563
NCBI-ProteinID:
XP_061671544
LinkDB
All DBs
Position
3:35107321..35183307
Genome browser
AA seq
1135 aa
AA seq
DB search
MSINVSHSGFQSERFAMRHTSLDKLIELQKNPANIRNLCILAHVDHGKTTLADCLVASNG
IISSRQVGKLRYLDSREDEQIRGITMKSSAISLHYQEGGQDYLLNLIDSPGHVDFSSEVS
TAVRLCDGAVVVVDAVEGVCPQTQVVLRQAWLENIRPVLVINKVDRLIMELKLTPQEAYT
HLQKIMEQVNAVTGTLFTSRVMEEQAEKTKDEKGSGTLPEDQVYDWSAGLDEADDSNLYF
SPDQGNLIFASAIDGWGFSIQHFAHIYSERMGINAEVLRKTLWGDFYLNAKAKKIMKGAQ
FKGKKPLFVQLVLDNIWSLYDAVVIRKDKEKVDKVLSSLGVKVMARDSRHSDPKVLLSAI
CSQWLPVSQAVLSMVCNKLPSPLQIAAERVEKLMSVGVRRFDTLPESTQALKNAFLQCSS
NENAPVIVFVSKMFAVDTKSLPQNRQRPLTQAEIAQRRELTRQRHAERMATEQTAAVGHK
NHAGNNQLNIQMGELSKDDMENQVPKESKEEEQSETFIAFARVYSGVMKRGQRIFILGPK
YDPAQGLSMLPEQCSASDTFPEVPHLSCCSIENVYLIMGRELEELEQVPSGNVLGIQGLE
EFILKSATISTTPACPPFTPLNFEASPIVRVAVEPKHPSEMPKLVRGMRLLNQADPCAEV
LIQETGEHVLVTAGEVHLQRCLDDLKDRFAKIEISASKPIIPFRETVVRPPKVDMVNEDL
GKQHKVAVIHQVKEDYYHDRSSETLHVDSSGLVTLTTPNKLATVSVRAIPLPQEVTCLLE
KSSALIRTLEQVNMSLKEGRNIDVSVRTLEAIADFKAQLERMLQGRKWRNAVENIWAFGP
RRCGPNILLNKLEGYQRPSLWQCLCREDKNGAQAPNTREFDNSIVSGFQLATLSGPMCEE
PLMGVVFSIERCDIQSLNSPYQNNLEESSTFQEASRANKAEENADALEVNPTEPSQDRRS
LETTSAGCYGPVSGQLIAAVKEACRHAFQAQPQRLMAAMYTCEIMATAEVLGRVYGVLGK
REGRILQEEMKEGTEIFIIKAVLPVAESFGFADEIRKRTSGLASPQMVFSHWEVISSDPF
WVPTTEEEYLHFGEKADSTNQALKYMNAVRRRKGLYVEEKIVEHAEKQRTLSKNK
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgtcaataaatgtgtcccactcaggtttccaaagtgaaaggttcgccatgagacatacc
agtttggataagctcattgaactgcagaaaaatccggccaatataagaaacctttgcatc
ttggcacatgttgaccacggcaaaactactcttgcagattgcttagtagcaagcaacggt
atcatatcaagtcgccaggtgggaaagctaagatatctggacagcagagaggatgagcag
atcagaggaattaccatgaagtccagtgccatctctcttcattaccaagaggggggtcaa
gattacttattgaatttgattgactctccggggcatgttgacttctcttccgaagtttcc
actgctgtccggctgtgtgatggtgccgttgttgttgttgatgctgtggagggagtatgt
ccccagacccaggtcgtgctgcgacaggcatggttggagaacatcaggcctgttctggtt
attaataaagtagacagacttataatggagctgaagcttacccctcaggaggcttacacc
cacttgcaaaagatcatggaacaggtgaatgcagtgacaggaaccttgttcacgtccaga
gtgatggaggaacaagcagagaaaacaaaagatgaaaaagggagtgggacactgcctgaa
gatcaagtgtatgattggagtgcagggctagatgaagctgatgactctaatctctacttc
tctcccgaccaaggaaatctgatttttgcgagtgctattgatggatggggctttagcatt
caacattttgctcacatatacagtgagaggatgggcattaatgcagaggtgcttcgcaaa
actctatggggagatttctacctcaatgcaaaagctaaaaagatcatgaagggagctcag
tttaaaggcaagaaaccactctttgtgcagcttgtcctggataacatttggagtttatat
gatgctgttgttattcgcaaagataaggagaaagttgacaaggtgctatcatcacttggc
gtcaaagtgatggccagggattctcgtcattctgaccctaaagtccttctctctgctata
tgcagccagtggttaccagtgtctcaggctgtcctctcaatggtatgtaataagcttccg
agtccattacaaatagcagcagagcgggtggagaaactgatgagtgtaggagtacgaaga
tttgacaccttgcctgagagtacgcaggcactgaaaaatgcatttctccagtgctcaagc
aatgaaaacgctccggtcatagtttttgtgtccaagatgtttgctgtggacacaaaatct
ttgccacagaacagacaaagacctttgactcaagcagagattgcccagcgcagggaactc
acacggcaaaggcatgctgaaaggatggcaactgaacagacagcagcggtaggacataaa
aaccacgcagggaataatcaattgaatattcagatgggagaactcagcaaagatgatatg
gaaaatcaagtgccgaaagaatccaaggaagaggagcaaagtgagaccttcattgccttc
gcaagggtgtacagcggggtgatgaagagaggccaaagaatattcatacttggaccaaag
tatgatcctgcccagggcctgagcatgctgcctgagcaatgcagtgcttctgacactttc
ccagaggtccctcatctgtcctgttgttccattgaaaacgtctacctgattatgggccga
gagttagaagagcttgaacaagtgccctctggcaatgtactcggtattcaaggtctggaa
gagtttattttgaaatcagccactatttcaacaactcctgcttgcccacctttcacccca
ctcaattttgaagcatcacccattgtacgagttgctgtagaaccaaaacacccaagtgag
atgccaaaactggtgcgtgggatgcgtctgttgaatcaagcagacccctgtgctgaggtt
ctcatccaggagacaggggaacatgtattggtcactgctggagaggttcatctccaacgc
tgcctggatgacctcaaagacaggtttgctaaaattgagatcagcgcatctaagcccatc
attccattccgagagacagtggtgcggcctccaaaagtggacatggtgaatgaagatctt
ggcaagcaacacaaagtggctgttattcatcaggtaaaagaggattactatcatgatcgt
tcttcagagacccttcatgttgatagcagtggtttggtcacactcaccacccccaataaa
ctggccacagtcagcgttcgtgcaatccccttgccacaagaggtgacttgtcttttggag
aaaagctcagcactaattcgaactttagaacaagtcaatatgtccttgaaggagggtaga
aatatcgacgttagtgttcggaccttggaagccattgctgacttcaaggcccaattggaa
cgcatgctccagggaaggaagtggaggaatgccgtggagaatatctgggcctttggacct
cgcaggtgtggcccaaacattctgctaaacaaactggagggctatcagcggccatctctt
tggcagtgtctttgtcgagaagataaaaatggagctcaggcaccaaatacacgagagttt
gataacagcattgtgagtggcttccagttagcgaccttgtcaggtccaatgtgtgaagag
cctctcatgggggtcgtcttctccattgagagatgcgatatacagtctttaaactcaccg
tatcaaaataacctggaggaaagttccacatttcaagaggcttcaagagctaacaaagca
gaggaaaacgctgatgctttggaagtcaaccccacagaaccaagccaagacaggcgctca
ctagagactacttctgcaggctgctacgggcctgtctcaggccagctaattgcggctgtg
aaggaggcatgccgccacgctttccaggctcagccccagagacttatggctgcgatgtat
acctgtgaaatcatggccacggcagaggttctgggccgagtatatggtgtgcttgggaag
cgagaagggcggatcctccaggaagaaatgaaggaaggaacagaaatattcatcatcaag
gctgttctgccagtcgctgagagttttggttttgcagatgaaattcgcaagaggaccagt
gggttagccagtccacaaatggtcttcagtcactgggaggtgatcagcagcgatccattc
tgggttcctaccactgaggaagaatacctgcactttggagaaaaggcagactcaactaat
caggcactcaagtacatgaatgctgttcgccgccgaaaaggcctgtatgtggaggaaaag
atagtcgaacatgcagaaaagcaacgaaccctaagcaagaacaaatag
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