Syngnathoides biaculeatus (alligator pipefish): 133498569
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Entry
133498569 CDS
T09681
Symbol
mex3b
Name
(RefSeq) RNA-binding protein MEX3B isoform X1
KO
K15686
RNA-binding protein MEX3 [EC:
2.3.2.27
]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbia03019
]
133498569 (mex3b)
04121 Ubiquitin system [BR:
sbia04121
]
133498569 (mex3b)
Enzymes [BR:
sbia01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133498569 (mex3b)
Messenger RNA biogenesis [BR:
sbia03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
133498569 (mex3b)
Ubiquitin system [BR:
sbia04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133498569 (mex3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_Vigilin
zf-C3HC4_3
KH-I_KHDC4-BBP
zf-C3HC4
zf-C3HC4_2
RING_XB3-XBAT31
zf-RING_UBOX
KH_DEAH11_2nd
Prok-RING_4
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
133498569
NCBI-ProteinID:
XP_061671559
LinkDB
All DBs
Position
3:35200231..35221038
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AA seq
526 aa
AA seq
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MPSSLFADRSVQGDALDEQRALQIALDQLSLLGLSHDDDDDSREPRRKNVNMTECVPVPS
SEHVAEIVGRQGCKIKALRAKTNTYIKTPVRGEEPVFVVTGRREDVAMARREIISAAEHF
SLIRASRNKNTSLNGSGTPVPSPPNLPGQTTIQVRVPYRVVGLVVGPKGTTIKRIQQQTH
TYIVTPSRDKEPVFDVTGMPENVDRAREEIEAHIAVRTGGLIEVQDVNDFHDNGTDVGFD
LNGHPNLWSKPSAGMTPSSVCKTFYKYRNDSSSSLGSASTDSYFGTNSHMADYSPPSPAL
SYTANSINCNINNNNNISVNTKSNGFVYGNEAISPDCTDLTSDSPPGFEPMPAQPAILWS
LYENENNPPLTRGSSSTYTTSIYPDNSNGMLINQRRTNGDGSQCRMSPTLHTGPNQHQMA
PRVCSDLSEDLLNFSGYVNSVASLTHSHLACIPCDSSASSSSSSSSTSRKGSRDCSVCFE
SEVIAALVPCGHNLFCMDCANRICERSEPKCPVCHTSVTQAIRIFS
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atgcccagctcacttttcgccgaccgcagcgtgcagggggatgcgctggacgagcagaga
gccctccagatcgccctggaccaactctctctgctcgggttaagccacgacgacgacgac
gacagccgggagccccgaagaaagaacgtcaacatgaccgagtgcgttccggtgcccagc
tccgagcatgtggccgagattgtgggcagacaaggttgcaagattaaagcactgcgagca
aaaaccaacacctacatcaagactcctgtccgaggtgaggagccagtttttgtagtgaca
gggagaagggaggatgtggcaatggccaggagagagatcatctcggcggcagagcatttc
tcactgattcgagcttctagaaacaaaaacaccagcttaaatgggagtggtactccagtc
ccaagcccccctaacttacctggacaaaccaccatccaggtgcgagtaccctaccgtgta
gtgggtcttgttgttggccccaagggcactacaattaaacgcatccagcaacaaactcat
acttacattgtgactcccagtcgagacaaggagcctgtgtttgacgttacaggaatgcca
gaaaatgtggaccgagcccgtgaggagattgaagctcacattgccgtgagaacaggcggt
cttatagaggtccaggatgtaaacgacttccatgacaatggaacagatgtagggtttgat
ctgaatgggcaccctaatctgtggtcgaaacccagcgcagggatgacccccagctcagtg
tgcaaaaccttctacaagtaccgcaatgactcgtcgtcctccctaggaagcgcctccact
gactcctactttggcactaattcccacatggcagactacagtccccccagccctgctctg
agttatacagcaaacagcattaattgtaacatcaacaacaacaataatatcagcgtcaac
acaaagagcaatggttttgtttatggaaatgaggcaatctctcctgactgcacggatctg
acttctgattccccgccagggtttgaacctatgccagcccaacctgcgattttatggtct
ctgtacgaaaatgaaaacaaccctcctttgaccagaggcagttcttccacctacacgaca
tctatttatcctgacaattccaatggcatgctgataaatcagagaagaacaaatggagac
ggatcccaatgcaggatgtcacccaccctccacactggtcccaaccaacaccagatggct
cccagggtctgcagtgacctgagtgaagacttgctaaatttctctggctatgtcaacagc
gttgcctccctgacacactctcatcttgcttgcattccatgtgactcctctgcctcctct
tcctcctcttcgtcatccaccagccgtaaaggcagccgggactgttcagtgtgctttgaa
agcgaggtcattgcagcactggtcccctgtggacacaacctcttctgtatggactgtgcc
aatcgtatctgtgagcgaagcgaacccaaatgccccgtctgccacaccagtgttactcag
gctatacgtatattttcataa
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