Syngnathoides biaculeatus (alligator pipefish): 133498607
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Entry
133498607 CDS
T09681
Symbol
dis3l
Name
(RefSeq) DIS3-like exonuclease 1 isoform X1
KO
K18681
DIS3-like exonuclease 1 [EC:3.1.13.-]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
133498607 (dis3l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbia03019
]
133498607 (dis3l)
Messenger RNA biogenesis [BR:
sbia03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
133498607 (dis3l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_Dis3
CSD2
Rrp44_CSD1
OB_HELZ2
IQCJ-SCHIP1
DUF5319
Motif
Other DBs
NCBI-GeneID:
133498607
NCBI-ProteinID:
XP_061671662
LinkDB
All DBs
Position
3:complement(37407729..37471621)
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AA seq
1051 aa
AA seq
DB search
MSTCKMIKTERILHLKSSRGRKVRVVREHYVRDRVPCYSALCQAYCDNGGKVLPGDLTHY
VVPDVGVVVDYQEILEIRELQGIVFTQTACQAVHHCKGRRQYNRLRNLLKDPRHDCVLFA
NEFQEFSFCLRDNGESHEQWQTRCVYSAAVWYYNHLAGMMDIVMITEDPDVIAQYTNLHS
GVYVISVQEYLQNFWSALEGARELYSSICQARQEKESEVTEREFADHLPAEVLEAGIKSG
RYIQGTLNVNKHRAQTEASVRIEGLSNKNTVELTSEVLVYGNKSRNRAVHGDMVVVELLP
KSEWRGKVSALTKGQLEEKNAQDIQSKPMPTGNVVGILQRNWRDYVVTFPTQESTQSQSR
NSQRILTVPWDYRIPKIRINTQQAEALQDHRVVVRIDSWENTSLYPNGHNVRVLGRAGDL
ETEIQTILIENSINVPPFSDAQLKEMPMNSPEKPWKVDPSEVIERRDLRESHLVFSIDPV
DCEDVDDALSVRSLAGGKVVELGVHIADVTHFVSEGSLTDLEARARATTYYLADRRYDML
PANLSADLCSLLGGVDRYAMSVLWQLDAHTLAVNNVWYGRTIIRSSYQLHYELAQALLSG
EHAEVPELTNFSPSETDSKLAQLTQALEILTHVARHLRVQRDRGGALELEGVEVRAQLDN
EKNITALVPRQPLEIHETVAECMIYANHWVARKIQETFPHQALLRHHPLPRQEFFTLLVD
SAKSRGFTIDTGSNKALADSLDRAVDPQDPLLNRVLRMMATQAMSQALYFSTGAISEDQY
YHYGLALDRYTHFTSPIRRYADIMVHRLLTAAIGVEKGQSPAKALATNKELDELAHHINK
KNRAAQRVQKASTELFQCLYFKERDPHTGQYCVADAVIYAIRDNGVLAFVPLYGMKGPVY
MKSREGRVLSAGQDGPCEWQSGSIRCYSDRIVTTSLIGTTTFTLFSHITVRICVHSSWCH
ADSVNLELVSNRPHQGVTPHQTPSHDRSQLVQEVVRLAEEATQQAQVKAGWQHKLSKEEQ
EFCQTKSPNLYLLLEEIRELSLMGLEYATKA
NT seq
3156 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacttgcaaaatgatcaagacagaaagaattctccatttgaagagcagtagggga
cgaaaagttcgtgtggtccgcgaacattacgtgagggaccgagtgccatgctacagcgcg
ctttgtcaagcctactgtgacaacggtgggaaggtgttgccaggagatttaacacactat
gtggttcctgatgtgggagtggtagttgactaccaggagatcttggagattagggagctg
caggggatcgtctttacccagacagcctgtcaagctgtccatcactgtaaaggacgcaga
caatataaccgtctacgaaacctgctgaaagatccccgacatgactgtgttctgtttgct
aatgaatttcaagagttttccttctgtctgcgggacaatggggagagtcacgaacagtgg
cagaccaggtgtgtttactctgcagcagtatggtactataaccacctagctggtatgatg
gatatagtgatgatcacggaagacccggatgtcattgctcagtacaccaacctccactct
ggagtgtatgtcatctctgttcaggaatatttacaaaacttctggtcagcgctcgagggc
gctcgtgaattgtacagttccatttgccaggcccgacaggaaaaagagagtgaagtcaca
gagagagagtttgctgaccacctaccagctgaagtcctggaggctggtatcaagtctgga
cgctacattcagggaactctgaatgttaacaagcacagagcacaaacagaagcttctgtc
agaatagagggtctctccaataaaaatacagtagagctgaccagcgaggtgttggtatat
ggaaataagagtcgtaacagggctgtgcatggcgacatggtcgtcgtagagctgttgcca
aagagtgaatggagggggaaggttagtgccctgacaaaaggacaattggaggagaaaaat
gctcaggacattcaaagtaaacctatgcctacagggaatgttgtcgggatcctacagagg
aattggagagactatgtggtaacattccccacccaggagagcacacaatcccagagcagg
aactctcagcgcatcctaactgtaccttgggactatcgcatcccgaagatccgcattaac
acacagcaggctgaagctttgcaggaccacagagtggtggtgcgcattgactcatgggaa
aacacatcactgtatcctaatggacacaatgtgagggttctgggtcgagctggtgatctt
gagaccgaaatacagaccatccttatcgagaactccatcaatgtccctcccttctctgat
gcacagctgaaagagatgccgatgaattctcccgagaagccctggaaggtggatccttct
gaggtgattgaacgacgagacctgagagagagtcacctggtgttcagcattgacccagtg
gactgcgaggatgttgatgacgcactgtctgtgcgcagcctcgcaggtggaaaggtggtg
gaacttggggtccacattgcagatgttacacactttgtttctgaaggctcgctcactgac
ttagaagcacgtgcaagggctacaacttactaccttgcagaccgcaggtatgacatgttg
ccagcaaatctcagtgcagatctctgctctctgttgggaggagtagacaggtatgcaatg
agcgtgctgtggcagcttgacgcacacaccctcgccgttaacaatgtgtggtatggtcgc
acaatcatccgctcctcttaccagctacactacgagctagctcaggccctcctcagtggc
gagcatgccgaggtaccggagctgaccaattttagcccttccgagacagactccaagttg
gctcagctcacccaggctctggagatactcacccatgtggcaagacacctccgggtccag
cgagatcgaggcggtgcattggaactggaaggggtggaggtgcgtgcacagctggacaac
gaaaagaacatcactgctctggtcccacgccaacccctcgaaatccacgagacggtggcc
gagtgcatgatctatgctaaccactgggtggcacgcaagatccaggagacctttcctcat
caggctctgcttcgtcatcacccactaccacgacaggagttcttcacccttctggtggac
agcgccaagtccagaggcttcaccatcgataccgggtccaataaagctttggctgactct
ctggaccgggctgtggacccacaggacccattgctgaacagggtgctgaggatgatggcc
acccaagccatgtctcaggcactatatttctcgaccggtgctatttccgaagaccagtac
taccactatggtttggctctggaccgctacacacacttcacatcacccattcgtcgctat
gccgacataatggtccatcgccttctgacagcggccattggtgtggagaaggggcagagc
cctgctaaggcactagccactaacaaagaactagatgaattggctcatcatatcaacaaa
aagaacagggcagcccagcgggtacaaaaggcgtccacagagttgttccagtgtctgtat
tttaaagaaagagaccctcacacaggccagtactgcgtggccgatgctgtcatttacgcc
atccgagacaacggtgtgttggcctttgttccgctgtacggcatgaaggggcccgtgtac
atgaagagccgagagggccgggtgctctctgcaggacaggacggcccctgcgagtggcag
agcgggtctatacgctgctattcggaccgcatcgtgaccacctccctcattggaactacc
accttcacactgttcagccacatcactgttcgaatttgcgtgcattcgtcatggtgtcat
gctgacagtgtcaaccttgagcttgtcagcaacaggccacaccagggcgttacaccacac
cagactccgtcgcatgaccgcagccaactggtccaagaggtggtgcgcttagctgaggaa
gcgacccagcaggctcaggtgaaggcgggctggcagcacaaactctccaaagaggagcaa
gagttttgccaaaccaaaagcccaaacttgtatttactcctggaggagattcgagagctt
tcactgatgggcctggaatatgccaccaaggcctaa
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integrated database retrieval system
