Syngnathoides biaculeatus (alligator pipefish): 133498865
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Entry
133498865 CDS
T09681
Name
(RefSeq) rho guanine nucleotide exchange factor 28-like isoform X1
KO
K21072
A-kinase anchor protein 28
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbia04131
]
133498865
Membrane trafficking [BR:
sbia04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
133498865
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH_16
PH
C1_1
PH_13
SOS1_NGEF_PH
DUF2205
PHDvar_NSD
Ank_2
PHD
PHD_2
Motif
Other DBs
NCBI-GeneID:
133498865
NCBI-ProteinID:
XP_061672062
LinkDB
All DBs
Position
4:complement(32403418..32454642)
Genome browser
AA seq
1798 aa
AA seq
DB search
MMELSRRKVPLYGQAKVFALLEGLDSMIKDTEVFIVLEGSTLVHVTRAQREVMLCFIVPG
HNLAEVVSVQAYLCSETTPLTWVGGAMLEYVQDDAQDLAEHLVTHGHCLSAMDHKELSSF
FNLGQQSSRRAMDRRVALAMANLDIPPNWNVLGSPCRNDHSPRESLLHLAVRWELCRLAE
LLLCQPGGLMAISLPNKDGVTPLQLARSSGNGELLELLTHPPNPLATPPAGLSQVWADHS
RLLRYCHDTGNLTVTIRQNLKWSTEESRHADIQLLRSRLRDEGFLREIKALRRERTVKTF
SKEQLVDDPAENGHLYDMSEDNSAPDDNDFEEPLMFCLNQDNQEDEQSDSEKSQSIGESQ
ASSPTLAAAARLSAMIHGKDKVYANSTVVDQVDDVDMKYRSRPVPDVGRPCWDLFSMTPP
DSKMCPKNPHPPTPQNAKRAIRNPGPEKSKESSLHSSPPSPSSPFALPRSFPSSPLASAF
RLFEGGQKRQPQTTLPVSPTLNGRGCNLSAATRGLSPSLECDSGEEDIVGNSYPCSASNQ
HSSSPDFNQSQANTEKPTKNSEEGEVRLRSYSYSSPKARPSRPFLNRDATVADLAEDGAF
NSSGRSLLQALSLSKSLSRLNQVKQSVLNLTEASKEKRIEDEEWDKYIIPSKVESEKYKV
SRTFSFLKSRMSSTRNKTKVKGKEGKDGKDKSGGPNGHQFVLVSLSCPPVCVACDKSVSG
KELLQCSNCFVNVHKNCRDSVAPCGKKLQEKNALLMKSKTSSLPQNSVKDNTSSSSSLSP
ASSLMTTPKEKRETLAPLPKSLTVSLENRRLSDTAGVEVDSPPTAHNSHSEEGTPTTTTP
PSIDPPVTSQDEVDAPLLSDLSADLLGLDAESWSLAVSPDFCRQHDRRAIKRQDVIYELM
QTELHHIQTLTVMSEVFRRGMLEELQLDWDCVARIFPCLDSLLLFHRNLFGSLQECRQAS
IQSENQRNYLIHHIGDILLQQFSDENAEKMKQVYGDFCSHHMEAVNVFKELQQQNKKLQN
FVKQQSSNSLVRRRGIPEFILLVTQRITKYPVLLERILHYTQEGSQEHSDLSSALAQIRD
IIAAVDLTVNKYERSQELQEVLARLENKSLAKLKSGKVIRKQDLHSNHRDLQHKGLLYWK
TATGRLKDTLALLLTDVMVFLQEKDQRFVFAAVDQKPPVIPLQKLIVREVANEERGMFLI
SASSAGPEMYEVHTTTREERNAWMKQIRQAVESCPEEEEEEERSAESEEAKRAVEAKVQK
MSKFQETLLSQDQRICNSLEEKLQLYAELTDLTLHSPEAIAHRHLLVQPEIDIESPRQAS
TLLTAALREAENLITILQAHDGLLVQSDISPIRGPDSCNYNSHGSSIQESPSEPDYLSTL
SMSSTSLGSDSEGTAMDGVVWRSPPKTKKGDTKDTLFKVAESVQSLTQLLYSLQAAVTLQ
DSCLEIQKILLQEGDKSQLKTLTFTHTFQNTFEQERQTGNDKKTEEIEKKALERKKEEVD
EVQKLHVKLKQDQQRWDKECVTREKQQNEQETALEQREQQCILEAERLRCEREELKTQLL
EYHNSLDRLREGQKSVDREKEKLEAQQRFLQTWRHNRQSSLPVTIPLDGYKLPPIHSRSG
SLDGTCWTYESDAALLDSLEKKHPPNNNPHQYLLSAPKRNHDGLRQASSYGADLSLSASL
YNSLNTLLSQTHGKQPQDALTFAHYSKSHECSQPSSTSVNPFSGRPRPQPQSTSKYFSPQ
LDRHSLGSWRPEMRGRELYENTYPSSSPSLAPLLPSQSYLSLEGHLREDSGEENIVYL
NT seq
5397 nt
NT seq
+upstream
nt +downstream
nt
atgatggagctgagcagaaggaaagtccctctttacggccaggctaaggtgtttgcatta
ttggagggcctggattccatgataaaagataccgaagtcttcattgttttggaaggatcc
acgctggtccatgtcaccagggctcaaagggaagtcatgctgtgctttatagtgcctgga
cataaccttgctgaggtggtctctgtacaggcctacttgtgctcagaaacaacacctctc
acatgggtgggtggcgcaatgttggagtatgtccaagacgatgcacaggacctggcagag
caccttgtcacccacggacattgtctgagcgccatggatcacaaagagctgagcagcttc
ttcaacctcggccaacagagctcccgtagggctatggatcgacgtgtagccctcgccatg
gctaacctggatattcctccaaattggaatgtgcttgggagtccctgtagaaacgatcac
agcccaagagagtctctgctccacctggctgtacgatgggaactgtgtcgactggccgag
ctgctgctttgtcaaccgggaggtctgatggctatcagccttccaaacaaagatggagtc
acaccgctgcagctggcacggtcatcaggcaatggagaactgctggagctcctcacacac
ccaccaaaccccctagccacacctcccgcaggactatctcaggtgtgggcagatcactcc
cgcttgctgaggtactgtcatgacaccggtaatctgacagtgaccatccgacaaaatctg
aagtggagcacagaggagagccggcatgctgacattcagctgctcagaagcagacttcga
gacgagggcttcctcagagagattaaagcgctaagaagggagcggacagtgaagactttt
agcaaagaacaattggtggatgatcctgcagaaaatggacatttgtatgatatgagtgaa
gataattcagctccagatgataatgactttgaggaaccactgatgttttgccttaatcag
gacaaccaagaagatgagcagtctgattctgaaaaaagccagtccataggcgagagccaa
gcctcgtccccgactttggctgctgctgccaggctgtcagcgatgatccacgggaaagac
aaagtttatgccaactccacggtggtggatcaggtggatgatgttgacatgaaataccgc
tctcggccagtgcctgatgttggcaggccttgctgggacctcttctccatgacacccccc
gactcaaagatgtgtcccaaaaatcctcacccacccacgccgcaaaacgccaagagggct
atccgaaacccaggcccggagaaatccaaagagtcatctcttcacagctctcccccctct
ccctcttccccctttgctctccctcgatctttcccgtcctcccccctggcttccgctttc
cgtttgtttgaaggaggacagaagcgacagccgcaaaccacccttccagtctctcccact
ttgaacggcagaggatgcaacttgtcagcggcaacccgtggactgagtccaagtctcgag
tgtgatagcggagaagaggacatagtgggaaattcttacccctgctctgcttcgaaccag
cactccagctccccagactttaaccaatctcaggcaaacaccgaaaagcccactaagaac
tcggaggaaggcgaggttcgactgcgttcatattcctactcctcccccaaggcgaggccc
tcgcgcccctttctaaacagagatgcaacggttgctgacctggcagaagatggtgcattc
aacagcagtggtcgttctctacttcaggctttatctctctctaaatcactctctcgactc
aaccaagttaagcagagtgtgctgaacctgacggaggcttccaaagaaaagaggatcgag
gatgaagagtgggacaaatacataattccatccaaagtcgagtcagagaagtataaagtg
agccggaccttcagtttcctcaagagcaggatgtcgagcactcgcaacaaaaccaaggtg
aaagggaaagagggaaaggatggaaaggacaagagcggtggcccgaacggacaccagttt
gttcttgtgtccctatcttgtcctcctgtctgtgtggcttgtgacaagtctgtttctggg
aaggagctgctgcagtgctccaactgtttcgtgaacgtccataagaactgtcgagactct
gttgcaccatgtggaaagaagctgcaggaaaagaatgcattgctgatgaaaagcaagacc
tcgtctctcccacagaattctgtgaaagacaacacttcctcctcctcatcactttcccca
gcttcctcacttatgacaacgcccaaagaaaagcgagaaacactcgcgcctctgcccaaa
agcctcactgtgtctttagagaacagacggctgagtgacacagcaggggtggaggttgat
tcccctccgacagctcacaactcacattctgaggaggggactcctactacaacaacccct
ccttcaatcgacccaccagtcacttcacaggatgaagtcgatgctcccctactgagcgat
ctgtcagccgacctgttgggactcgacgcagaatcgtggagcctcgcagtcagtcccgac
ttctgcaggcagcatgacaggcgtgccatcaaacggcaggatgtcatttatgaattaatg
caaacagaactgcaccatatccagactctgacagtcatgtcggaagtgttcagacgaggc
atgctagaggagctccaactggactgggattgcgtggcccggattttcccgtgcttggat
tccttgctgctcttccacaggaatcttttcggatcactgcaagagtgcagacaggcttca
atccaatctgagaaccagagaaattacctcatccatcacattggagacatcctgcttcag
cagttctcagatgaaaatgctgaaaagatgaagcaagtatatggagatttctgcagtcac
cacatggaagctgtcaacgtcttcaaagagcttcagcaacagaataaaaaactccagaac
tttgtcaaacaacagagcagtaactcactggtcaggagaagagggataccagagtttatc
cttttggtcactcagcgcatcaccaagtacccagtcctgttggagaggatattacattac
actcaagaaggcagtcaggaacactcagacttgtcaagtgctctggctcagatacgggat
atcatcgccgcagtggacctgactgtaaataagtacgagaggtctcaggagctgcaggaa
gtgctcgcccggctggagaataagagcttggctaaactcaagagcggcaaggtaattcgc
aagcaagacctgcacagcaatcacagagatctacaacacaaggggctgctctactggaag
accgcaacagggcgcctaaaagatacattggcgcttttgcttactgacgtcatggtgttc
ctgcaagagaaagatcagcgctttgtatttgcggctgtggaccagaaacctcccgtgatc
ccactgcagaagctcatcgtgagagaagtagccaatgaggagcgagggatgttcctcatc
tctgcttcctcagctggaccagagatgtatgaagttcacacgaccaccagagaggaaaga
aatgcttggatgaaacagataagacaagctgtcgagagttgtccagaggaagaggaggag
gaggagcgcagcgctgaatcagaagaggccaagcgagcagtggaagcgaaggttcagaaa
atgtcaaagttccaagagacattgttaagccaggaccagcgcatctgcaacagtttggag
gagaaattacagctgtatgctgagctcactgacttaacgctgcactctccagaagccata
gcacatcgccacctgctggtacaaccggaaattgatattgagtcgccaagacaggcctca
acgctcctcacggctgcactcagagaagcggagaacctgatcaccattctgcaggctcac
gatggccttcttgtacaaagtgacatctctccaatccgtgggcccgattcctgcaactac
aatagccacggcagcagcatccaagaatctccctcagaacccgattatttaagcacgctc
agtatgagctccacctctcttggatcagacagtgaggggacagcgatggatggagtcgtg
tggaggtctcctcctaagacaaagaaaggagacactaaagatacactgttcaaggtggca
gaaagtgtccagagtctgactcagcttctttatagtctgcaggctgctgtgacccttcaa
gacagctgtcttgagatccagaaaattctccttcaggaaggagacaaatctcagctcaag
accctcaccttcacacacaccttccaaaacaccttcgagcaggagaggcagacgggcaat
gataagaaaacagaggaaattgaaaagaaggctttggagaggaagaaggaagaggtggat
gaggtgcagaaactccatgtgaaactgaaacaagaccagcagcgctgggacaaggaatgt
gtgaccagagagaaacaacagaatgagcaggagactgcactggaacagcgtgagcagcaa
tgcatcctggaggcagagcggctgcgttgcgagcgagaggaactgaaaactcagctgctg
gagtatcataacagtctggacagactgcgggaaggccagaagagcgtggacagggagaag
gagaagctcgaagcccaacagagattcctccagacctggaggcataaccgacagagcagt
ctacctgtcaccattccgctggatggatacaagctgccgccgattcacagtcgctcaggc
agcctggacggcacctgttggacatacgagagtgatgcagctctgctcgactccctcgaa
aagaagcacccccccaacaacaacccacaccagtacctgctctccgccccgaagaggaat
cacgacggcctccggcaagcttccagctatggcgctgacctcagcctcagcgccagtctc
tataacagcctcaatactctgctcagccaaacccacgggaaacaacctcaggatgcgctc
acattcgctcactactcaaagagccacgagtgcagtcagccttccagtacctctgtcaat
cccttcagcggcagacccagaccacagccgcagagcaccagcaagtacttcagtccacag
ttggatcgacattccctggggtcctggaggccagagatgcgaggtcgagaactttacgaa
aacacctacccctcttcctcaccttccctcgccccgctcctcccctcacagtcctacctc
tctctagaaggacatctcagggaggacagtggcgaggagaacattgtttacctctga
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integrated database retrieval system
