Syngnathoides biaculeatus (alligator pipefish): 133498889
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Entry
133498889 CDS
T09681
Symbol
cltcl1
Name
(RefSeq) clathrin heavy chain 1
KO
K04646
clathrin heavy chain
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04142
Lysosome
sbia04144
Endocytosis
sbia05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
133498889 (cltcl1)
04142 Lysosome
133498889 (cltcl1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
133498889 (cltcl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbia04131
]
133498889 (cltcl1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sbia04147
]
133498889 (cltcl1)
Membrane trafficking [BR:
sbia04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
133498889 (cltcl1)
Exosome [BR:
sbia04147
]
Exosomal proteins
Proteins found in most exosomes
133498889 (cltcl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_PEP5_VPS11
TPR_COPA_B
TPR_Vps41
Gp18_dom_I
LVIVD
Motif
Other DBs
NCBI-GeneID:
133498889
NCBI-ProteinID:
XP_061672118
LinkDB
All DBs
Position
4:complement(32651592..32686752)
Genome browser
AA seq
1675 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGVNPANIGFSYLTMESDKFICIREKVGEQNQVVIVDMSDPSN
PIRRPISADSAIMNPTSKVIALKAAKTLQIFNIEMKSKMKAHSMTEEVMFWKWISVNTVA
LVTDTAVYHWSMEGDSQPNKVFDRHASLAGCQIINYRTDEQQKWLLLIGISAQQNRVVGA
MQLYSVERKVSQPIEGHAAAFGEFKVEGNASPSTLFCFAVRSQAGGKLHIIEVGQPAAGN
QPFAKKAVDVFFPPEAQTDFPVAMQIGSKHGVIYLITKYGYIHLYDLESGVCIYMNRISA
ETIFVTSPHEASSGIIGVNKKGQVLSVSVEEENIVNYATNVLQNPDLALRMAVRSNLAGA
EELFARKFNAVFAQGSYSEAAKVAASAPKGVLRTAETIRKFQSVPAQPGQASPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKASDPTLALSVYL
RANVPSKVIQCFAETGQFQKIVLYAKKVGYTPDWVFLLRNVMRVNPDQGLQFAQMLVQDE
EPLANINQIVDVFMEGSLIQQCTSFLLDALKNNRPAEGHLQTRLLEMNLIHAPQVADAIL
GNQMFTHYDRGHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLLNFFGSLSV
EDSLECLRAMLSANIRQNLQLCVQVASKYHEQLGTQALVELFESFKSYEGLFYFLGSIVN
FSQEPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNTLQKYIEIYVQKVNPSRLPVVIGGLLDVDCAEDVIKNLIMVVRGQF
STDELVEEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNTPERFLKENTFY
DSAVVGRYCEKRDPHLACVAYERGQCDMDLIKVCNENSLFKSEARYLVRRKDPELWANVL
EENNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYVNRLDNYDAPDIANIAISNELFEEAFAIFKKFDVNTS
AIQVLIEHIGNLDRAYEFAERCNEPAVWSQLARAQLQRDLVKEAIDSYIKAVDPSAYMEV
VNAASKNNNWEDLVKFLQMARKKARESFVETELIFALAKTNRLAELEEFVSGPNNAHIQQ
VGDRCYEEGMYEAAKLLYNNVSNFARLASTLVHLGEYQSAVDSARKANSTRTWKEVCFSC
VDGEEFRLAQICGLHIVIHADELEDLISYYQDRGYFEELIALLEAALGLERAHMGMFTEL
AILYSKFKPEKMREHLELFWSRVNIPKVLRAAEQSHLWAELVFLYDKYEEYDNAVITMMS
HPTDAWKEGLFKDIIAKVANVELYYKSLSFYLDYKPLLINDLLSILSPRLDHNRAVNFFT
KVNELKLVKPYLRSVQNHNNKSVNEALNNLLTEEEDYQGLRASIDAYDNFDTISLAQRLE
KHQLIEFRRIAAYLYKGNNRWRQSVELCKKDKLYKDAMLFAAESKDAELAETLLQWFLEE
GKKECFAACLFASYDLLHPDVVLELAWRHNIMDFAMPYFIQVMREYLTKVDKLETAESQR
QTEEEVTEPQSMVFGQQLMLTGSPAPVTPQPGYPGYSYPVNAAGYPAQPPYGFPM
NT seq
5028 nt
NT seq
+upstream
nt +downstream
nt
atggcccagatactgcccatacgattccaggaacatctgcagttgcagaacctgggtgtg
aatccagccaacattgggttcagctatctgaccatggaatcagacaagttcatctgcatc
agggagaaagtgggtgagcagaaccaggtggttatcgtggacatgtctgacccgtccaac
cctatcaggcgaccaatctcagctgacagcgccatcatgaaccccaccagcaaggtcatc
gccctgaaagctgcaaagacgctgcagatctttaacattgagatgaaaagcaagatgaag
gctcactctatgactgaggaggtcatgttttggaagtggatctcggtaaatacggtcgcc
ttagtgacggacacggctgtctatcactggagcatggagggggattcccaaccaaacaaa
gtattcgatcggcacgccagtctggcaggatgtcagatcattaactacagaactgacgaa
caacagaagtggctgctgctgatagggatttctgcgcagcaaaaccgtgtggttggggca
atgcagctgtattcggtggaaagaaaagtgtcgcagccaatagaaggtcacgctgctgca
tttggggagtttaaagtggaggggaacgctagtccgtccaccctcttctgctttgctgtg
cgctcacaggcaggtggaaagctgcacatcattgaagtgggtcaaccagctgcaggaaac
cagccatttgcaaagaaagcagtcgatgtgtttttccctccagaggcccagacagacttt
cctgtagccatgcagatcggaagtaaacacggtgtcatatatttaattaccaagtacggt
tacattcatctgtacgacctggagtcaggagtgtgcatctacatgaacagaatcagtgct
gagaccatctttgtcacgtcgcctcatgaagccagctccggaatcatcggagtcaacaag
aagggacaggtgttgtcagtcagtgttgaagaagaaaacattgtgaactacgcaacgaac
gtcctccagaatccagacctggctttaaggatggccgtgaggtccaacctcgctggtgcc
gaggagctttttgccagaaagtttaacgcggtttttgcccagggaagttattcagaggcg
gcgaaggttgccgcgtcggcacccaagggtgttctgcggacggctgagaccatccgtaag
tttcagagtgtcccagcccaaccaggtcaggcatctccactgttgcagtactttggtatt
ctgttggaccagggtcagctcaacaaattcgaatccctggaattatgcaggcctgtcctg
cagcagggccgcaagcaactgctggagaagtggctgaaggaggacaagctggagtgctca
gaggagctgggggatctggtgaaggcttctgacccgacccttgctcttagtgtgtacctc
agagctaacgtccccagcaaggtcattcagtgctttgcagagaccggccagttccagaag
atagtcctgtatgccaaaaaggttggttacaccccggattgggtgtttttgctgagaaat
gtaatgcgtgtcaacccagaccagggactgcaatttgctcagatgctggtccaggacgag
gagccactcgccaacatcaaccagattgtggatgttttcatggaaggcagcctaatccag
cagtgcacttccttcctgttggatgctttaaagaacaaccgcccagctgaaggacatttg
cagacacgtctgcttgagatgaaccttatacatgcgccacaggtggcagatgcaatcctg
gggaaccagatgttcacacattacgatcgtggccatgttgctcagctgtgtgagaaggcg
ggccttctgcagagagccctcgaacactacactgacctttatgatatcaagcgagctgtg
gtgcacacacacctgctcaaccctgagtggctgctgaacttctttggctctttgtcagtt
gaggactcgttggagtgtttaagagccatgctgtcggctaacatcagacagaacctgcag
ctctgtgtgcaggtagcgtcaaagtatcacgagcagctgggaactcaggcactcgtggag
ctctttgagtccttcaagagttacgagggtttgttttacttcctcggctcgattgtgaat
ttcagtcaggaacctgacgttcacttcaagtacatccaggcagcctgcaagactggacag
atcaaagaggttgagaggatctgcagagagagcaactgttatgacccagagagagttaaa
aattttctcaaggaagccaagttgacagaccagcttcctctcattattgtttgtgaccga
tttgactttgtccacgacctggtactctacctctaccgaaatactctgcagaaatacatt
gaaatctatgtacagaaagttaaccctagtcgattaccagtggtgataggtggcctattg
gatgtggactgtgcagaagatgtcattaagaatttgattatggtggtcagagggcagttt
tccactgatgagcttgtggaggaggtggagaaaagaaacaggttaaaactactcctgcca
tggttggagtcacgtatccacgaaggctgcgaggagccagccacccacaacgctctggcc
aagatttacatcgacagcaacaacacacctgaacgtttcctgaaagagaacaccttctac
gacagcgctgtggtggggcggtactgtgagaagagggacccccatcttgcctgcgtggct
tatgagagagggcagtgtgacatggacctcatcaaagtctgcaatgaaaactccttattt
aaaagcgaggctcgatatttggtgcgacggaaagacccggaactttgggccaacgtgttg
gaagagaacaatccctacaggaggcccctcattgatcaggtggtacaaactgcgttgtca
gagacccaagatccagaggaggtgtcagtgacggtcaaggcattcatgactgctgacctg
cccaacgagttgattgaactcctggagaagatcgtgcttgacaactctgttttcagtgaa
cacagaaaccttcagaacctgctgattctgactgccatcaaggcggatcgtacgcgtgta
atggagtatgtgaataggctggacaactacgatgcaccagacattgctaatattgccatc
agcaatgagctctttgaggaggcttttgccatatttaagaagtttgatgtcaatacgtca
gccatacaggtattaatagaacatataggaaacttggatcgggcctatgaatttgctgaa
agatgcaatgagcccgcagtatggagccagttagcccgggctcagctgcaacgagacctg
gtcaaggaggccattgactcgtatattaaagcagtggacccctcggcgtacatggaggtg
gtcaatgcggccagcaaaaataacaactgggaagatttggtcaaattcctccaaatggct
cggaaaaaagcgcgggaatccttcgtggagacggagctgatctttgctttggctaaaaca
aaccgtttggctgaattggaggaatttgtcagcgggcccaacaacgctcacatacagcag
gtgggagacagatgttacgaggagggaatgtacgaggccgctaagctcttgtacaacaac
gtgtcaaactttgcccggctggcatccacactagttcacctcggggagtatcagtctgct
gtggacagcgccaggaaagccaatagcacacgcacttggaaggaggtttgtttctcatgc
gtggatggcgaggaattccgtctggcgcaaatctgtggcctccacattgtcatccacgcc
gatgagctggaggacctgatcagctactaccaggaccgcggctactttgaagagctgatt
gcgctgctggaggcggctctgggcctggagcgggcgcacatgggcatgttcaccgagctc
gccattctttattcaaagttcaagccggagaagatgagagagcacttggagctcttctgg
tccagagtcaacattccaaaggtcctgcgtgcagcagaacagtcccatttgtgggctgag
ctggtgttcctttacgataaatacgaagagtacgacaacgccgtcatcacaatgatgtct
catcctactgatgcgtggaaagaaggccttttcaaagacattattgctaaagtggccaat
gttgagctgtactataaatctctttctttctacctggattacaaacctcttctaatcaat
gacctgctgagtattctgtctccacgcttggatcacaatcgtgcggtcaactttttcaca
aaggtgaatgagctcaagttagtaaagccgtacctgaggtctgtccagaaccacaacaat
aagtctgtcaatgaagccctcaacaacctgctgacagaggaggaggactaccagggcctg
agagcatccatcgacgcctatgacaattttgacacaatcagcctcgcccagaggttagaa
aaacaccagctgattgagtttcgacgcatcgccgcttatctgtacaagggcaacaatcgc
tggagacagagtgtagaactctgcaagaaagacaaactctacaaggatgcaatgctgttc
gctgcagagtccaaggatgctgagcttgcggagacccttctgcagtggttccttgaggag
ggcaagaaagagtgctttgccgcctgcctctttgcgtcctacgacctgctgcaccctgat
gtggtgctggagctggcctggaggcacaacatcatggactttgccatgccgtattttatc
caggtcatgagggagtacctgacaaaggtggacaaactggagacagctgaaagccagagg
caaactgaagaggaggtgacagaacctcagtcgatggtgttcggccagcagctgatgctg
acggggtctcctgctccagtgactccccagccggggtatccagggtatagctaccccgtc
aacgccgcaggctaccccgcccagcccccgtacggcttccccatgtag
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integrated database retrieval system
