Syngnathoides biaculeatus (alligator pipefish): 133498892
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Entry
133498892 CDS
T09681
Symbol
ncor2
Name
(RefSeq) nuclear receptor corepressor 2 isoform X1
KO
K06065
nuclear receptor co-repressor 2
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
133498892 (ncor2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sbia03036
]
133498892 (ncor2)
Chromosome and associated proteins [BR:
sbia03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
133498892 (ncor2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Myb_DNA-bind_6
PRP38_assoc
DUF3915
DnaT
Motif
Other DBs
NCBI-GeneID:
133498892
NCBI-ProteinID:
XP_061672120
LinkDB
All DBs
Position
4:4047435..4162699
Genome browser
AA seq
2363 aa
AA seq
DB search
MSSHPQSVPPGRRPMDTRHLPNPATLPLQLQRAHTEVGMVDYHSHHGRDYSSHLAQPHRR
RPSLLSEFQPGNESCFCRGQEQHIRYEHIYLPEPSSHSELEFGEIKRPRLEMGPDSLMRP
SSHRPQLPHGGSEDLAKDRGSAMGKLEPISPVSPVHMDPDLDLVPARFSKEELIQNMDRV
DREITMVEQQICKLRKKQQQLEEEAAKPHEPEQPISPPPSEAKHRSLVQIIYDENRKKAE
EAHRVLEGLGPRVELPLYNQPSDTKQYHENIKINQAMRKKLILYFKRRNHARKQWEQKFC
QRYDQLMEAWEKKVERIENNPRRRAKESKVREYYEKQFPEIRKQREMQERIQSRVGQRGG
GLSSSAARSEHEVSEIIDGISEHENTEKQMRQLAVIPPMLFDAEQQRIKFINMNGLMDDP
MKVYKDRQVMNMWSEQEKDTFREKFIQHPKNFGLIASFLERKTVAECVLFYYLTKKNENY
KNIVRRNYRRRGRSQHGQQQQQQQQQQQQQQQQVNRSSQEDKEKEEKDKEGEREEEKPEA
EDKEDGMKDETSGEDAEDKEPAVAVKGRRTANSQGRRKGRITRSMTSEVEETTAAPVNNE
LANLEMNESSRWTEEEMETAKKGLLQYGRNWSAIAKMVGSKTVSQCKNFYFNYKKRQKLD
EILQQHKMKSEKERKARRRGKSLQNEEATAPFTAAEEEELEGSGASGNEEEAPEDGEGGT
NNSSDTESLPSPRSADDTKAKEEGSNKSKAGSNSGDKEVAGTDSEQAEDVKLPIKEEPEL
SIKQEIKTESASPNKDPDQASPSTEATDKKAPAAEADDVKNCPKSSKKDHGAKAGSHGDS
DSSATCSADEVEEADNTEKNRITSPRPSLLNYAHDGVISSPLQKPMDLKQLKQRAAAIPP
IIPEASVQGNQRSGGAKAVLPPHALALYQQQITMAHGESSQEVKQQQQQQLSGQPGKQQP
YSQQADRDREAPHSSSPRIRPRSPATGDKDEKSQAFSSHGDVKRPALGPDDLRSANLGRA
VLSPFPVSPRDLAKISHDQHLLQFNSFQQVGHPVLPGLQQDSARQATVRPLIMPEPPPLI
SSTKPGGSITQGTPVQLHSPAHGFEHGKMPSTQMSLSWIDQRKGGAPFPVVKQEQLSPRS
SSLQPDNPSTQGPPHDGGRAVQGGSITKGIPGTRMHPDSAISYRGGSITQGTPADVLYKG
TITRLITEDSASRAERERDDTLSKGHVVYEGISGHILTYDRPVSQTSKDDGRGPGQAGEI
LGLKRPYDVMEGGISRGLPMRDSLSASNCEGLIGRAMPHDRDSPHHTPYKDAHHIRGSIS
QGIPRHLDPQDSYLRREAKQMKRENSPPHGASSLSDAIKGREAMVPTVKEAGRSIHLIPR
EELRQPAKESIITPGTPMKQEAGSSGKRHDVRSIIASSPRSYHNAPPHLEMRAERGRYEE
AHKGRPSAVVSTASPIARSSPLTLASEQGGKSHHSPVGYEDKGTLRNAYPGPSHRGSPLS
SQRQHDGSSKKEPQERKATPTPREMSATKSPLPGVPDQQTFERLLQGLGADVYRQIPLAF
DPAALPRGIPIDPAYYLPRHLAPNPAYPHPYPYLIRGFPDTAALENRQTLLNDYITSQQM
HQWPAAAAMAAQRSDMLRGLTPRDQPLPLPYSAAPRGIIDLSQVPHLPVLVPPSAGTAGS
PMDRITYIPGGSATFPGRPYTTPPISPVGSSHMNKMQGTSSSSERERERDRDRDRERERE
RDRDRDRERERDREKGGGNVEHAPIWRPGTEHSLASSSGVRASSQPYSHQHSPVSPRTQE
TVQQRPSVLHNTGSKNLSSEHPSPSVLRSVPSGPSRYQGYHGHLQRTGLPPEAYTSALDS
SGAKEQSREGGKNRGLPKQVQDQHGPSSKSDSKLTSPSQGGIYPGPYSSISGRAPHLQLE
NPHGRGDGGTPSRENAQNKTMSIQEQELRALAQQKMESHVLYRPPSAERLSPGQKPPSPC
VKGSQRVVTLAQHISEVITKDYRQSQQQHQQGYHGSPILDLTRPPSASQPPASSQEAPQA
GRYAEGLGGDRNRDRSPSQSKSSPISVSNDCIEPVSPAGANSELEIQGGGSYPNELGEQV
MGSRSPPNTSQPPAFFSKLTENTSAIVKSKKQEMIKKMTVVGNDDFNAGQPGTEIFNMPA
STTAGWTLSSTGSVGVRSHPAPETPGGSIGLEAIIRKALMGKYDDQPEERSPAASAQQLV
SGLPVGLSATDGRADDTFSQGGGKASKGSGRSNGRKAKSPAPGLSGGERPSSVSSVHSEG
DCNRRTPLTNRVWEDRPSSTGSTPTPFPCNPLIMRFPGGTVSVPSPSSGQPVGHVAAQGQ
GRAWEEEPKPLLMSQYESLSDSE
NT seq
7092 nt
NT seq
+upstream
nt +downstream
nt
atgtcctctcatcctcagtctgtgccaccgggccggagaccaatggacacgcggcacttg
ccgaaccccgccaccttaccgttgcagctccagcgggcgcacacagaagtgggaatggtg
gactaccactcccatcatggccgcgactacagctcgcacttggcgcaacctcatcgccgt
cgaccctccttgctttcggagttccagccgggaaacgagagttgtttttgcagaggacag
gagcagcatatccgctacgagcacatctacttaccagagccgagcagccattccgagttg
gagttcggagagatcaaacggcctcgtctggagatgggaccagattctctgatgagacct
tcgtcccatcggccgcagttgcctcatggagggtctgaggatctcgctaaggatcgcgga
agtgccatggggaagcttgagcccatctcccctgtaagtcctgtgcacatggaccccgat
ttggatctggtgccggcccgcttttccaaggaagaactgatccagaatatggaccgtgtc
gacagggagatcacgatggtggaacagcagatctgcaagcttcgcaaaaagcagcaacag
ctggaggaagaggctgccaaacctcacgagccagagcagcccatttcccctccgcccagc
gaggccaagcaccgcagcttggtgcagatcatctacgatgagaacaggaaaaaggcagaa
gaggctcatagagtactggagggactcggacccagggtagaactgccactgtataaccag
ccttctgataccaagcagtaccatgagaacatcaaaataaaccaggcgatgaggaaaaaa
ctcatcttatacttcaaaagaagaaatcatgctcgtaagcaatgggaacagaaattctgc
cagcgttacgaccaactgatggaagcctgggagaagaaggtggagcgcattgaaaacaac
ccgcggcgccgagccaaggagagcaaagtacgggagtactacgaaaaacagttcccggag
attcggaagcagagagagatgcaggaacgaatacagagccgcgttgggcagcgaggaggt
ggattgagctcttctgcagctcgcagcgaacacgaggtctcagagatcattgacggaata
tcagagcatgagaacacagagaaacaaatgcggcagctggcggtcatccctccgatgctg
tttgacgccgagcagcaacgcatcaagttcatcaacatgaacggattgatggacgacccc
atgaaggtgtacaaggaccggcaggtcatgaatatgtggagcgagcaagagaaggacacc
ttcagagagaaattcatccaacacccgaaaaactttggcctcatcgcatctttcctggaa
agaaagacggtggcggaatgtgtgctcttttattatttgaccaaaaagaacgagaactat
aagaacatcgtgcgaagaaactacaggcggcgaggaagaagccagcacggccagcagcaa
cagcagcagcagcagcagcagcagcaacagcagcaacaagtcaatcgcagcagccaggaa
gacaaggaaaaggaggagaaagacaaggaaggcgagagggaggaggagaaaccagaagct
gaagacaaggaggatgggatgaaagatgaaacttctggcgaagatgcagaggacaaagag
cctgcagtggccgtgaagggccggcgaacagccaacagccaaggacgccggaagggccgg
atcacccgctcgatgaccagcgaggtggaggagacgaccgcggcgcctgtcaacaatgag
ctcgccaatctggaaatgaatgaaagttctcgctggactgaagaagagatggaaacggcc
aaaaaaggtcttcttcagtatggtaggaactggtctgccattgccaagatggtgggatca
aaaactgtgtcgcagtgtaagaacttctatttcaactacaagaaaaggcaaaaactggat
gagattttacagcaacataaaatgaaatcggagaaggaacgaaaggctcgccgcaggggc
aaaagccttcaaaatgaagaggccactgccccattcacagcagcagaagaagaagagttg
gaaggctcgggcgcaagtggcaatgaagaggaagcgcctgaagatggagaaggtggcacc
aacaacagctcggacacggagagtttgccatcgccacgttcagctgatgataccaaggcc
aaggaagagggttccaataaatccaaggctggctctaatagtggggataaggaggtagcc
ggaacagactcagaacaggctgaagacgtgaagcttccaataaaagaagagccagagctc
tccatcaagcaggagatcaagactgaatcagcatcgccaaacaaggatccggaccaagcg
tcaccaagcaccgaggccacggacaagaaggctcccgcggcagaagctgacgatgtcaaa
aactgtcccaagagctcaaagaaagaccacggggccaaagcaggctcacatggggacagc
gactccagcgccacttgcagcgctgatgaagtcgaagaagcggacaacacagaaaaaaac
agaataacgtccccgcgtccaagcctactgaactacgctcatgatggcgtcatctcatcc
ccgctccagaagcccatggaccttaaacagctcaaacagcgggcggccgccatcccgcca
attataccagaagcgtcggtccaaggcaatcagcggagtgggggtgccaaggctgtgttg
cccccccatgctttggcactgtaccaacagcagatcactatggctcatggggagtcgtct
caggaggtcaaacaacagcagcagcagcagctttcgggccagccaggcaaacagcagcct
tattcccaacaagctgatagagacagggaggctcctcatagcagcagccctcgcatccgc
ccacgcagccctgccactggtgacaaggacgaaaagtcgcaggctttctcttcgcatggc
gacgtcaagaggccagcactggggcccgacgacttaaggtccgctaacctgggtcgagcg
gttttgtctccgttccccgtgtccccacgagacttggccaagatcagtcacgaccaacac
ctgctccaattcaactcattccagcaagtgggccacccagtacttcctggtttgcaacag
gatagtgccagacaagcaacagtgagacccctcattatgccagagcccccacctctcatt
tcctcaaccaagccagggggctccatcacacaggggactcctgtacagttgcacagccca
gctcatgggttcgaacatgggaaaatgccttctactcagatgagcttgtcttggattgat
cagaggaaaggtggtgctccattccctgtggtcaagcaggagcagttatcccctcgcagc
tcatccttgcaacctgacaacccatctacccaaggcccacctcatgatggtggaagagct
gttcagggcggtagcatcacgaagggtatcccagggaccagaatgcatccagattccgca
atctcctacagaggtggctctatcactcaggggacaccggcagatgtgctgtataaggga
accattacccgtctgatcacagaggacagcgcgagccgagctgagagggagcgggatgac
accttgtccaaaggtcacgtggtctatgagggaataagtggtcacatcctcacatacgac
cgtccagtttctcaaacctctaaagatgatggtagagggccaggccaagctggtgaaatt
cttggcctaaagcgtccttacgacgtgatggagggaggcatctcccgcggtctgcccatg
agggattccctgtctgcttccaactgtgaaggtctaatcggccgagccatgccccatgac
agggacagcccccatcacacaccttataaagatgcgcaccacatacgaggttccatctca
caaggaataccacgtcatctggaccctcaggatagctacctgagaagggaagccaagcaa
atgaaacgagagaactctccgccacacggggccagttcactgtcagacgcgataaagggc
agggaggccatggtgcccacagtgaaggaggctgggcgctccatccacctcattcccagg
gaggagctcagacagccagccaaagaaagcatcataacaccgggaactcccatgaagcag
gaagctggcagctcaggtaaacgacacgacgtccgctccatcatagccagctcgccacgt
tcctaccataacgcgccccctcacctggagatgcgggcagagagggggcgctatgaggag
gcccacaaaggacgcccgagtgcggtggtcagcaccgccagcccgatagctcgctcctct
cccctgacgctggcttccgagcagggaggcaaatcgcatcacagccccgtcggctatgag
gacaaaggcaccttgagaaatgcttaccctggcccgtcacaccgtggctcgccgctttcc
agtcagcggcaacatgatggctccagtaagaaagaacctcaagagcgaaaagccacaccg
accccgagggagatgagcgcgaccaaatcacctctcccgggggttcctgatcagcagacg
ttcgagcgactgttgcagggcctcggagccgacgtttacagacaaattcctttggccttc
gatcctgcggcactgcctcgcggcatccccatcgacccagcctactacttgcctcgccat
ctggcccccaacccggcgtaccctcatccctacccctacctcatccggggatttccagac
acggcggccctggagaaccggcagacgctgctcaatgactacataacttcccagcaaatg
caccagtggcctgcagcggctgccatggctgcccagcgctcagacatgctaaggggcctt
actccgcgagatcagccccttcctctgccttactctgcagcccctcgtggaatcattgat
ctatctcaggtgccgcacttacctgtcctggtccctccctctgcagggacggccggctcc
ccaatggaccgtatcacctacatcccgggggggagcgccaccttccctggcaggccttac
accactcccccaatctcacccgttggttcctcgcacatgaacaagatgcaaggcacatca
tcttcttcagaacgcgagcgtgaaagagatcgtgaccgagaccgggaacgggagagggaa
cgcgacagggatcgtgacagagagagagagcgggacagagaaaagggtggaggaaatgtg
gagcatgcccccatttggcgaccaggtacagagcacagcttagcaagtagtagcggtgtg
agagcttcttcccagccgtacagccaccagcattcgccagtgtcccctcgcacacaggag
actgtgcagcaaaggcccagcgtcctgcacaataccggaagcaagaatctttcctccgaa
caccccagcccctccgtgttacgatccgtaccttcaggaccctcccgttaccaaggttac
catggtcacctgcaaaggaccggtttgcctcctgaggcctacacctctgccctggattcg
agtggagccaaagagcagagtcgcgaaggaggcaaaaaccgaggactacctaagcaagtc
caagatcagcacgggccctcgagcaagtcggactccaagcttacaagtcccagccaggga
ggaatatacccaggtccttactcctcgatttcaggacgtgcgccgcacctgcagttggaa
aaccctcatggccgcggggacggtggtacgcctagtagggaaaatgctcaaaataaaacg
atgtccattcaggaacaagagctcagagcactcgctcaacagaagatggagtcacatgtt
ctgtatcgacctccgtctgcggaaaggctttcgccaggccagaaaccgccttcgccttgt
gtgaaaggcagccaacgggtcgtgaccctggctcagcacatcagtgaggtgatcacaaaa
gattacaggcagagtcagcagcagcatcaacaaggttaccacggctcacccatcctggac
ttgacccgaccccccagtgcctcacagcccccggcctcttcccaggaggccccccaagcg
ggccgctacgccgagggcctcggcggggaccgtaacagagaccggtctccttctcaatcc
aagtcttctcccatcagtgtttccaatgactgcatcgagccggtttctcctgccggggcc
aactccgagcttgaaatccagggaggaggctcgtatcccaacgagctaggagagcaagta
atgggctcccgttccccgcccaacacctcgcagcctccggctttcttcagcaagctgact
gagaacacctccgctattgtgaaatcaaagaagcaggagatgatcaagaagatgactgtg
gtgggaaacgacgattttaatgcgggtcagcccggaacagaaatcttcaatatgccggca
tctacaacagcaggatggacgctgtcttcaacaggatcggtgggcgttcgcagccacccg
gcccccgagacgcccggcggctccatcggtctggaggccatcataagaaaggctttgatg
ggaaaatacgacgatcagcccgaggaacgctcgcccgccgcgtcggctcagcagctggtg
tcgggtctgcccgttggcttgagcgcaaccgacggccgcgcggacgacaccttctcgcaa
ggtggcgggaaggcctcaaagggcagcgggcgctccaacgggcgcaaggccaagtcccca
gcgcccggcctgtcggggggcgagaggccgtcctcagtgtcctcggtccactctgaagga
gactgtaacagaagaacgccgctgaccaaccgagtgtgggaggaccggccctcctccaca
ggttcaacgccgacccccttcccgtgcaacccgttgatcatgcgtttccccggcgggacg
gtttcggttccctcgccttcgtcggggcagccggtgggccacgtggccgctcaggggcaa
ggccgcgcctgggaggaggagcccaagccgctgctcatgtctcagtacgagtcgctgtcc
gacagcgagtga
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integrated database retrieval system
