Syngnathoides biaculeatus (alligator pipefish): 133498917
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Entry
133498917 CDS
T09681
Symbol
dmxl1
Name
(RefSeq) dmX-like protein 1 isoform X1
KO
K24155
rabconnectin-3a
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
133498917 (dmxl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbia04131
]
133498917 (dmxl1)
Membrane trafficking [BR:
sbia04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
133498917 (dmxl1)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
133498917 (dmxl1)
RAVE complex
133498917 (dmxl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_IFT140_1st
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_HPS5
Beta-prop_EML
PEP5_VPS11_N
NBCH_WD40
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
133498917
NCBI-ProteinID:
XP_061672190
LinkDB
All DBs
Position
4:complement(10753706..10807830)
Genome browser
AA seq
3077 aa
AA seq
DB search
MNLHQVLTGAVNPGDNCFSVGSVNNVPFTAYASGCDVVVLGSDFERVQIIPGAKHGNIQV
GCVDCSLRGGQIAASYGSIVCIFEPVRRQDQKGTSLRNLNCQWQKTGQFVLQTMVRNLAW
HPKGKMLLTGSSCLQLWSHFDGGNDAEGGKRAEIRDCHCTWGCIWQSKTASPVNLMKFSP
DGEFFATAGQDDCLIKVWYSTNKWKSGGFRLFTPPESSVDFQGELAFSFVYLAHPRSVIG
FSWRKTSKYLPRGSVCNVLLTSCKDSVCRLWAETLLPGDSLLSGHHGNQHSDAQRCDSSS
AHCNGRMQAGTSQESPFYRDVAQPSFTGSLPHSQSRHYNHKKSNSNLPHANPLCHFHIAA
SINPATDIPLLPSISSLSAGEDEEPGGLFTVHWLNNKEFHFTLAMEVFLQQLRGSLEQQM
EYSQQDPENEDNSEEEEARPRDPQGPDATDLSLPATEHQVDVLLDEWNKGADMLFSIHPV
DGSLLVWNVDWLDEYQPRMFRQAQVSFVSRIPVAFPAGDAISLSHSVVMYACNKNVDLAI
QHGRQRPPGNALSQTKSALISYGHKGKASPSSSLRLSIFTPSVLMISKHDDGSLNQWGVS
FAEDSAFSTVLSVSHKSRYCGHRFHLNDLACHSLLPLLLTTSHHNALRSPEADDILAPPE
VFSGAHGSRPSRLSLPGVPQDPNAIYSELILWRVDPVGPLSLSGGVSELARINSLHASAF
SNVAWLPTLIPSICLGAYCNSPSACFVASDGHSLRLYQAVIEAKKLLSELSNPEISKYVG
EVFNIVSQQSTAKPGCIIELDAVTDFQGKETQLLHVFEEDLILGTERPDNSQEMTDSSCS
AHNKPTFAASFFLVVVELSPSGRSLLQMWHLHLAAKPVTMDETFSPQDAPAASSTSCSQF
NFDTLSSPIIQKSKPCTSNLQSACRLGLSTQRLSSQELPLPVGVEAISVTPSAGHLSASC
SLPAGRVPYLLATSCSDGSVRFWRCNVTASGTSGSDNLVYQWEEWPLLVEEKLPNCSAVS
VPGRPVQVSCCHTGRIAVAYRQTAPDTPLNLTPQQNSDAFLTCPPALASSPYLYDAIVNH
HIAPSITVLHSPNVFPGPSLVSAREQLVYISIFQCESTGGSQWILEQTIVLDTTDRSNTT
SPCDHIDLSLPVERCLGYTHRSLVHLDWVSQEDGSHVLTVGIGTKIYMYGRLSGKPPELC
LTSDGSRDQSLSRLVLLRSVNLVSSVEGSPPIPVSLSWVRDGILVVGMDCEMHVYSQWQP
PAPPKANGAMDTDISSSVSSIVSAVRQSQEDGLGSGPPTSLLAPPKKALTRSMMSLAQKL
SGKRTGYHLSLEMEDSGLFEAAHQLFPTLPQYHPVQLLELMDLGKVHRAKAILSHLVKCI
AGEIVALKDNATNGEKRVRSRTISAGGSTARERKMFGKDENSTPDYTEISSIPPLPLYAL
LAADEDTPSKHEKVGSVSGDSGHGSSHTDAYDELFHTPSIADLDPLDQDVQEEAGNKVID
LSQYSPTYFGPEHAQILSSHLLHSSLPGLTRMEQMSLMALADTIATTSTDLKDSQDKSKG
GETLDDCGLKFLLAVRLHTFLSTSLPPAHRAQLLRQGLSTCHYAWAFHSEAEEELLHMLP
ALHQGEPTWPELRSMGVGWWLRSTNKLRRCIEKVAKATFQRSSDPLDVAIFYLAMKKKAV
VWGLYRSQKNAKMTEFFRNNFSEDRWRKAALKNAFSLLGKQRFHHSAAFFLLAGSLKDAV
EVCLEKLQDLQLALVISRLYESEFETASTYKKILQRHVLGHDKQIAMHQDPFLRSMAYWV
LEDYSKALDTLLEQTTNKAQSGATDPGSMSSSNAEVFNFYTYLCTHPLLLRRHFGSCDKA
KVSLTAEGRRADSISLEERRLFFTAAYAHLQAGCPMLALEVLSKMPKVRKSCKLNQESSE
LSAGSKNGPMSNQDWSEPALNGYESDGGSLSNSQSDSVLSFDWSQPSLVHPDEPLELKWD
SDKDDEDDGEEEEETKNGKNCRPPDNSNVFHDTQNRLAPPMEAGTDADSEDNEDTGDCIE
PSDDVFVAQLKFTACLKILTNELRTLSTGYELDGGKLRYQLYQWLEREVVTLQHCCNYKP
HLPQVSTLEDAHIGGLVEDELAASPCSDTQRSRRKWLKSNQPLLRMFLSYCSLYGSHGGG
LASVRMELILLLQESHQDNCSPSPVAACSQNTSIPLLMACTANVKTVVANPIVYLNNLTH
DILQTINTLNSPPHPDVVNNEIYVMHTLAASLSACIYQCLCDGHYSHMNNFTGIVYQSIL
LSQKHPARAAGMDGSIQPNTSPAQWPGIASMVRLLSSAGDESQPGLAVLLCEILTAVYLS
LFVHGMATHSSNELFRITGHPLSSKLWVKVFGGGLRTPISERGNSPAKTPPPASPTINMS
DKKPRRFRLLSSRSGSKEESIEKEPPSSPKPEHVVDQEATSIFKECFVPPALSIWDYFIA
KPFLPPSESKVQYDSEESPGSEDDDDDDGDEYDDTFDPNSPQKEHTNNNSYSWCLMRLAM
VQLVQVNLKSFYPMAGYDLLDLPVASPLCHSVLKTLQRWEQVLQKRLEIFGGPPSKYIST
HFVEEAVTPGPALLRHKALFEPSNTPFRTNHHSALPVKRLWLFLVKQDEVQDTFIQNIFT
KKRDTGELVEDRSDMKCSGMDETGNHQTESDLGCPGGKARIIHKESDIITAFAINKANRN
CLVMASTHDIQELDVSSILATQILTWIDDEEVEAKGVGTDDFLVVHTHDDFVSLHGTTPY
TRSSPGTPINMPWLGGHQTGRGASVMIKRNINNVRRMTSHPTLPYYLTGAQDGSVRMFEW
GHSQQIICFRSPGNSRVTRIRFNHQGNKFGIVDADGALSLWQTNTSGAAPKPYLTLQCHN
KTAHDFVFVGSSSLIATAGLSTDNRNVCLWDTLVTPVNSLVHAFCCHESGATVLLMAPRR
QLLITGGRKGWISIVELPHRHQRQSFQAHDSPIKALAVDPTEDCFISGSAEGSLKVWNVA
TQCLLYRFPNEHARHSLFRNLGTGVMQVEVGPPNHVFSCGADGTMKMRTLPNRFGASNDD
SRRHRHGNLKNDVKFVL
NT seq
9234 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttcatcaggtcctcacaggggccgttaaccccggggacaattgtttctctgta
gggagcgtcaacaatgtaccgttcacggcgtatgcttccggttgcgacgtggtcgttttg
ggcagtgattttgagcgagtgcagatcattccaggggccaaacatggaaatatccaggtg
ggatgtgtggactgctcgctgcggggaggacagattgcagcttcctatgggagcattgta
tgcatttttgagccagttcggcgtcaggatcaaaaaggcacatcactgagaaatttgaac
tgccaatggcagaagactggccagtttgttttgcagacgatggtgcgcaacctggcatgg
caccccaaagggaagatgctattaacaggctccagttgcctgcagttatggtctcatttt
gatggagggaacgatgctgaaggaggaaaacgggcagaaataagagactgccattgtact
tggggatgtatctggcaaagcaagacagcctcgccagtcaatttaatgaagttttctcct
gatggagaattctttgctactgctgggcaggatgactgtcttataaaggtgtggtacagc
accaataagtggaagtctggaggtttccgacttttcacgccgccagagtccagcgtcgac
tttcagggagagctcgccttttccttcgtgtacctggcccatccacgttctgttattggc
ttctcttggaggaagaccagcaagtacttgccacgaggctccgtgtgtaatgtcctcctc
accagctgtaaggacagcgtgtgtcgactctgggcggagacgctgttgccgggtgacagt
cttttatcgggtcaccatggtaaccaacacagtgatgctcaaagatgtgacagctcttcc
gcacattgcaatggaagaatgcaagcaggaacatcacaggaatctcctttttatcgggat
gtggctcaaccctcgttcacgggctccctgccccatagtcaaagccgacactacaatcac
aagaagagcaacagcaaccttccccacgccaacccactctgtcactttcacatagcggcc
agcatcaaccctgcaacagacattccactgctaccctccatatcgtctctgagtgctggt
gaggatgaggagcctggaggtcttttcactgtccattggctcaacaataaagagtttcac
ttcacgttggctatggaagtctttctgcagcagctccgtggcagcctggagcaacagatg
gaatattcacagcaagatccggaaaatgaagataactctgaggaagaagaggccaggcca
agggaccctcaaggacccgatgcaacggacctctcccttccggcaacggagcaccaagtg
gacgtgcttttggacgagtggaacaaaggagcagacatgctgttcagcatccatcctgta
gatggctccctgttggtttggaatgtggactggctagatgaatatcaacccaggatgttt
agacaagctcaggtgtcgttcgtgtcccgtatccctgtggcgtttcctgcaggggacgcc
atctctctcagtcacagcgtggttatgtatgcttgcaacaagaacgtggatttggccatc
caacacggccgacaacgaccaccagggaatgccttgtcccagaccaagtctgcacttata
agttacggacataaaggcaaagccagcccaagcagcagtcttcgactgagcattttcacc
ccgagcgtgcttatgatctcaaagcatgacgacggctccctcaaccagtggggcgtgagt
tttgcggaagattcagctttctccacggtgctcagcgtgtctcacaagtcgaggtactgt
ggccaccgcttccacttaaacgacctggcctgccactctttgctgcctctgctcctcacc
acctcgcaccacaacgcattgaggtcccccgaggcagacgacatcctcgccccaccagag
gtcttctccggtgcccatggctcgcggcccagccggttgtccctgccgggcgtgccgcag
gatcccaatgcaatctacagtgagctgattctgtggagggtcgaccccgtggggccgctg
tccctctccggcggagtgtccgagttggctcggatcaattcgcttcacgcctcagctttt
tctaacgtagcttggcttcccacactcatccccagcatctgtttaggtgcgtattgtaac
tctcccagcgcctgctttgtcgcaagtgacggccactctctcaggctttatcaggcagtt
attgaggccaagaaactccttagcgagctctccaatcctgagatatcgaaatatgtcggc
gaggtgttcaacattgtcagtcagcagtcgacagcaaaaccggggtgcatcattgaactg
gatgccgttactgactttcaggggaaggagacacagctcctgcatgtatttgaggaggat
ctaatactcggcactgagagaccagacaactcgcaggaaatgacggattcatcttgttct
gcccataacaagcccaccttcgctgcaagtttttttcttgtggttgtcgaattaagccca
agcggtcgctccctcctacaaatgtggcatcttcatctcgcagctaaacccgtcaccatg
gatgagactttctccccgcaagacgcccccgcagcctcttcaaccagctgctctcagttt
aactttgatacgttgagttcgccgataattcagaagagtaaaccctgcacatccaatctg
cagagcgcatgtcggcttggcctctccacacagaggctctccagccaagaattgcctctg
ccagtaggagtggaggctatcagcgtcacgccctcggcaggtcatctcagcgcatcatgt
tccctaccagcaggccgcgtgccgtacctcctcgccacttcgtgttctgatggaagtgtg
cgcttctggaggtgtaatgtcacggcatctgggacctccggtagtgacaatctggtgtat
cagtgggaggagtggcctctcctggttgaagagaagcttcccaattgcagtgctgtgagc
gtgccaggtcgccctgttcaggtcagctgctgtcacactgggcggatagcagttgcctac
aggcagacagcaccagacacgcctctgaacttgacacctcagcaaaactctgacgcgttt
ctgacttgccctcccgccctggcctcttcaccttatttgtacgacgccatcgtaaaccat
cacatcgctccgagcataactgtgctgcacagcccaaatgtgtttccagggccttccctg
gtaagtgccagagaacagctggtctacatcagcatcttccagtgtgaatccacaggtggt
tcacaatggattctagagcagactatagtcttggatacaacagatcgtagcaacaccaca
tctccatgtgaccacatagatttgtctttgcctgttgagcgctgccttggttatacccat
agaagtttggttcacttagactgggtctcccaagaggatgggtcacatgttcttaccgta
ggcatcggaacaaagatatatatgtatggtcgtctctctggcaagcctcctgaactttgt
ctaacatctgatggcagtcgagaccaaagcttatcacgcctggttctgcttcgatctgtc
aacctcgtctcttctgttgaaggctcaccgcccatcccagtgtccctctcctgggtacgc
gatggcatattggtagtaggtatggactgtgagatgcacgtctactcccagtggcagccc
ccagctcccccaaaagccaatggtgccatggacacggacatcagcagcagtgtgtcctct
attgtatcagccgttagacaaagccaagaagatgggctcggttctgggcctcccacgtct
ttactggcccctcctaaaaaggccctcacaaggtcaatgatgagtctggctcagaagctc
agtggcaagagaacagggtaccacctttctttggagatggaagattctggactgtttgaa
gcagctcaccagctctttccgacactgccccagtaccacccagtccaattgctggagcta
atggacctaggaaaagttcaccgtgccaaagccatcctctcccacttggtgaaatgcata
gctggggaaatcgtggctcttaaagacaacgccaccaacggggagaaacgtgtgcgctct
cgaaccatcagtgcgggaggaagcaccgccagggaaaggaagatgtttggcaaagatgaa
aattccacaccggactacacagagatcagctccattcctcctcttcctctctatgccctt
cttgcagcagatgaggacacaccctcaaaacatgagaaagtggggagtgtgagtggggac
agcggccacggatccagtcacacagatgcttacgatgagttatttcacacgcccagcatt
gctgacttggatcctctggaccaggacgtgcaagaagaagctggaaacaaggtcattgac
ttgtcccagtacagccccacatactttgggccagagcacgcccaaattttgtcgagtcat
ctcctccattctagtttaccgggcttaacgcgcatggagcagatgtccctcatggcactg
gctgacaccattgcaacaaccagcacagacctgaaagacagccaggacaagagcaaaggt
ggagagacactggatgactgcggtctgaagtttttgcttgctgtcagactgcacaccttc
ctctctacctcgctgccgccagcccaccgagcgcagctgctccgacaaggcctgtcgaca
tgtcactatgcctgggcttttcactctgaagctgaggaggagctgcttcacatgctgcct
gccctccaccagggggagcccacctggcctgagctgcgctccatgggtgtgggctggtgg
cttcggagcacgaacaagcttcgcagatgcattgagaaggttgccaaggccacttttcag
agaagtagtgatcctttggatgtggccatattttacctggcaatgaagaagaaggcagtg
gtctggggactgtacagatcacagaagaacgccaagatgacagaatttttccgcaacaac
ttcagtgaagaccgatggaggaaagcagctctgaaaaatgccttctctctgttggggaag
cagcggtttcatcattcagcagccttcttccttttagctggctccctgaaggatgcagta
gaggtgtgtttagaaaaactgcaagaccttcagctggctcttgtgatatccagattatat
gagtcagagtttgagactgcatccacctacaaaaagatcctccagagacatgtgctggga
cacgataaacagatagcaatgcaccaggatccattcttacgaagcatggcttattgggtg
ctggaggactacagcaaagctttggacactctgctggagcagactaccaataaagcacag
tcaggtgccactgatcccggttctatgtcctcaagtaatgccgaggttttcaacttctac
acctacctctgtacccacccgctcctcctgcgtcgccatttcggctcttgtgacaaggcg
aaagtcagcctgacagcagaaggtcggagagctgactccattagcctcgaggagagaaga
ctctttttcactgctgcctacgcacacctgcaagcgggctgcccaatgctggcgctggaa
gtcctttccaagatgcccaaagtccgcaaaagctgcaaactcaaccaggagtcctccgag
ttgagtgccgggagtaaaaacgggccaatgtcaaaccaggactggtctgagcctgcgctg
aatggctacgagtcagacgggggcagcttatctaacagccagtccgattcggtgttgagt
ttcgactggagccagccgtcactcgtgcatccggatgagcccttagagctgaagtgggac
agcgacaaagatgacgaagacgacggagaggaggaggaggaaactaaaaatggcaaaaac
tgtagacctccagataacagtaacgtgttccacgacacgcaaaaccgtttggcgccgccg
atggaggcggggacggacgcggacagtgaggacaacgaggacaccggtgactgcattgag
ccttccgacgacgtctttgttgcacagctgaagtttactgcctgcctgaagattctgacc
aatgagctgaggacactttcaacagggtatgaactggatggaggaaaactacgttaccag
ctctaccagtggttggaaagggaggtggtaactctccagcactgttgcaattacaagccc
caccttccacaggtgtctaccctggaagatgcacatatcggtgggttggtggaggatgaa
ctggccgcaagcccttgcagcgacactcagaggagcagaagaaaatggctgaagagtaac
cagcccttactgagaatgttcctgagttactgcagcttgtatggctcccatggcggagga
ctggcttccgttcgcatggagctcattttactgcttcaggaatctcaccaggacaactgc
agcccatcacctgtagcagcatgctcccagaacacctcaatccctctcctgatggcttgt
acagccaacgtgaaaacggtggtggccaatcccattgtctacctgaacaacctgacgcat
gacatcttgcagaccatcaacacgctcaactctcctccacatccagatgtagttaacaac
gagatatatgtaatgcacactttggctgcctccttgtctgcctgtatatatcagtgtcta
tgtgacgggcactacagtcacatgaacaacttcacagggattgtgtatcagagcattttg
ctctctcaaaaacatccagcgagagccgctggcatggatgggtccattcagccaaacact
tctcctgcacagtggccaggtatcgcctcaatggtccgtctgttgagctcagcaggagat
gagagtcaaccgggcctcgccgtgctgctctgtgagatcctgacagctgtttacctcagc
ctctttgttcacggcatggccacccactcgagcaacgagctctttcgcatcacgggccac
cctctgagcagcaagctttgggtcaaagtgttcgggggaggtttgcggacccccatctct
gagagaggcaacagtccggcaaaaactcccccaccagcttcgcctaccataaacatgtcc
gataagaagcccagacggttccggctcctctcgtcacggagcggatcgaaggaagaatct
atcgagaaggagcctccctccagtccaaagcctgaacatgtggtggaccaggaagccact
tccattttcaaagaatgttttgtcccaccagcgctcagcatctgggattactttatcgct
aagccatttctgccaccttcagaaagcaaagttcagtatgactcagaagagagcccgggc
agtgaagatgacgacgacgacgacggcgacgaatacgacgatacgtttgaccccaactcg
cctcaaaaagagcacacgaacaacaattcatacagttggtgtttaatgcgcttggcaatg
gttcagctggttcaagtcaacctcaagtccttctacccgatggccggatatgatctattg
gatctgcctgtggcctccccgctgtgtcacagtgtgctgaagacattgcagcgctgggag
caggtgctgcaaaaaagacttgaaatctttggaggacccccctccaagtacatttccaca
cacttcgtggaggaagccgtcacgccgggccctgccctcctccgacacaaggccctattt
gaaccgtccaataccccatttaggacaaaccaccattcagcgctccctgtcaagcgcctt
tggttgttcttggtcaagcaggacgaggtgcaggatacgtttatccaaaacatctttacc
aagaaacgtgataccggagagttggttgaggaccggtctgatatgaaatgttcagggatg
gacgagacgggaaaccatcagactgagtcagatctgggctgcccgggggggaaggcccgc
atcattcacaaggagtcagacatcatcacggcctttgccatcaacaaggcaaatcgaaat
tgcttagtcatggcctccacacatgacattcaggagttggatgtgtcatccatcttggcc
acacagatcttgacatggatcgatgatgaggaggttgaagcgaaaggagtgggcacggat
gactttctggtggtccacacacacgatgactttgtctccttgcacggcaccacgccatac
actcgaagtagccccggcacgcccatcaacatgccgtggttgggcgggcatcagactggc
cggggagcctccgtgatgatcaagagaaatatcaacaatgtgagaagaatgacctcgcat
cccacactgccatattatttgacgggggctcaagatgggagcgtgaggatgttcgagtgg
ggtcactcccagcagattatttgcttcagaagtcccggcaactccagagtcaccaggatt
cgattcaaccatcaaggaaataagtttgggatcgtggatgctgacggcgctttgagcctc
tggcagaccaacacgagcggggccgctccgaaaccctatttgactctgcagtgccacaac
aagacggctcacgattttgtctttgtgggatcgtcgtccctcattgccactgcgggtctc
tccacagacaaccggaacgtgtgtctctgggacacgctggtgactcccgttaacagtctc
gtacacgccttctgctgccacgagtcaggcgccaccgtgctgctaatggcgcccaggcgc
cagctgctgatcacgggtgggaggaagggctggatcagcatcgtggagctccctcaccga
caccagcgccagagcttccaggcgcacgactcgcccatcaaagcgctcgccgtcgacccg
actgaggactgcttcatcagcgggtctgcggaaggcagccttaaggtgtggaacgtggcc
acgcagtgtctgctgtaccgcttcccgaacgagcacgcccgccactcgctcttccgcaac
ctgggcacgggcgtcatgcaggtggaggtggggccgcccaatcacgtcttctcctgcggc
gccgacggcaccatgaagatgaggacgctgcccaaccgcttcggcgccagcaacgacgac
agccgacggcatcgccacggcaacctcaagaacgacgtcaagttcgtcttgtag
DBGET
integrated database retrieval system
