Syngnathoides biaculeatus (alligator pipefish): 133498938
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Entry
133498938 CDS
T09681
Name
(RefSeq) spermatid perinuclear RNA-binding protein-like isoform X1
KO
K13200
spermatid perinuclear RNA-binding protein
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sbia03041
]
133498938
Spliceosome [BR:
sbia03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
133498938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_C
DZF_N
dsrm
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
133498938
NCBI-ProteinID:
XP_061672249
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All DBs
Position
4:33483142..33502769
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AA seq
670 aa
AA seq
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MQSFESDDRYVMVKHTSIYPDPENLEAIQTLVSTVETALKKVSDWLDGLNSSPGTITIDE
GGEDKVVHYAVDGTKLDTASTLCSVTRVGLLSKGLLIKGDMDLELVLMCQRKPTQLLLYT
ICAVLPQRIQASSEDKYEVRSCVEEAAIFVCSKSPYFTLKITLTSLDMRAPVLLPVIFPP
EGGLHTEVTPESNEDRDVLDEHKCRAALAALRRSNWFQATVSHVKCCVVVLRLLRDMCNT
MTEWRPLKEWPLEVICQKAISTCSRALGPGEALRRVMECIASGILLPGGPGIWDPCEKEP
TDILLNLKIQEADAMTRSAQHALRLLAFGQLYKVLNMDPLPTNKSSLQVSKDCQKRPRNE
TAREDKDLVKRMKVLDWRTIDPNHPTNALMRLNQIQPGLQYRLLSQSGPVHAPTFTMSVK
VQGIIYRASGNSKRNTKIQLALKVLQALGYVQSNDSDADWPDADDKSDGDRRKDTTPITS
STDSKECKAPGPVLTPAGKNPVMELNEKRRSLKYELISENGASHHKRFIIRVVVDKKVFQ
GTGPNKKVAKANAALAALNCLFTKAEAAGGKKNPTNTAPKRPTSSTLMLATRPVLLPVTP
TLPSYLSTPLPMPPALPTYLPSGGPTGFCTPFGFRGTSPNYSGVYMDGTCYPPPSLPTPI
LVHLSPRDFL
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgcaatcgtttgaaagtgacgaccgctatgtgatggtcaagcacaccagcatctacccg
gaccccgaaaacctggaggcaatccagactctggtgtccacggtggaaaccgccctcaag
aaggtctctgattggttggacggcctcaacagctcccctggtaccattaccattgacgag
ggcggtgaggacaaagtggtccactatgctgttgacggaaccaagctggacacggcatcg
acattgtgcagtgtgacacgagtgggtctgctatccaagggtttactgatcaagggggac
atggacctggagctagtgctcatgtgtcaacggaagccaacccagcttctgctctacacc
atctgtgccgttcttccccaaagaatacaggcatcgagtgaggacaagtacgaagtgcgc
tcgtgcgtggaagaggcggcaatctttgtgtgtagcaaatccccttacttcacgctcaag
atcaccctcacctccttggacatgagggccccagtgctcttgccagtcattttccctcca
gagggaggccttcacacagaggtgactccagagagcaacgaggacagagacgtcctggac
gaacacaagtgccgagcggcactagctgcgctacgacgatccaactggttccaggccaca
gtgtcacatgtcaaatgttgcgtggtggtcttgaggctcctcagagacatgtgcaacaca
atgacagagtggaggccactcaaagaatggccactggaggtcatctgccaaaaggccatc
agcacatgcagtcgggctttgggcccgggggaggcgctcaggcgtgtcatggagtgcatt
gcctctgggattctactgcctggaggtccaggaatttgggacccatgtgagaaggagccg
acggacatcttgctcaacctcaaaatccaagaggccgacgccatgacacgcagcgcacag
catgccttaagactcctggcctttggccagctttacaaggtcttaaacatggaccctctg
cccaccaacaagtcttcattacaggtctcgaaagattgtcagaagcggcctcgaaatgaa
actgctcgggaagacaaagacctcgtgaagagaatgaaagtgctggactggcgcacgata
gacccaaaccaccctaccaacgctctcatgcgcctcaaccagatccagcctggtctccag
taccgtctgctgtcccaatcgggcccagtgcacgctcccaccttcaccatgtcggtaaag
gtccagggaatcatctaccgggccagtgggaactccaagagaaacactaaaatccagctt
gccctcaaggttttacaagctcttggctacgtgcagagcaacgacagcgatgcagactgg
ccggatgctgacgacaagtcagatggtgacagaaggaaggacacaacgcccatcacttcc
tccacagactcaaaggagtgcaaagctcccggtccagtgctgacaccagctggtaaaaat
cctgtcatggagctgaatgagaaacgtcgtagcctcaagtatgagctgatctcggagaac
ggtgccagtcaccacaagcgcttcatcatacgggtggtggtggacaagaaggtcttccaa
gggacggggcccaacaagaaagtggccaaagccaacgccgccttggccgccctcaactgc
cttttcaccaaagcagaggcagccggcggcaaaaagaacccaaccaacacagctccaaag
cgacccacatcctctacgctgatgctcgccactcggcccgtcctactgcccgtcactccc
acgctgccctcctacctcagcactccgctgccaatgcccccggccctgcccacatacctc
ccttcaggtgggcctactggtttttgcactccatttggcttcagaggcacctccccaaac
tatagtggcgtgtacatggatggcacctgctacccaccaccaagcttgcccacacccatc
ctcgtccacctgagccctcgagatttcctttga
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