Syngnathoides biaculeatus (alligator pipefish): 133499056
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Entry
133499056 CDS
T09681
Symbol
usp39
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 2
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
133499056 (usp39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sbia03041
]
133499056 (usp39)
Spliceosome [BR:
sbia03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
133499056 (usp39)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
133499056
NCBI-ProteinID:
XP_061672537
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All DBs
Position
4:complement(651885..660251)
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AA seq
504 aa
AA seq
DB search
MITAVVSPKREREDDVDDQDDEDVVPVKKGRGRVVEDRRSRHCPYLDTINRSVLDFDFEK
LCSISLSHINVYACLICGKYFQGRGLKSHAYTHSVQFTHHVFLNLHTLKFYCLPDNYEII
DSSLEDITYVLKPTFTKQHISGLDKQGKLYRAYDGTTYLPGIVGLNNIKANDYANVVLQA
FSNVPPLRNYFLEEENYRGIRRPPGDIMFLLVQRFGELMRKLWNPRNFKAHVSPHEMLQA
VVLCSKKNFQITKQGDAVDFMTWFLNAMHSALGGTKKKPTILTKAFQGSMRIFSKKLPHP
DLTPEEKEALLLTSEYQEQMSESTFFFLTLDLPTAPLYKDEKEQLIIPQVPLFNILGKFN
GSTEKEYKTYKENFLKRFQLTKLPPYLIFCIKRFTKNNFFVEKNPTIVNFPITNVDLREY
LTEEAQVTEKNTTYDLVANVVHDGKPTEGAYRIHVLHHGTGKWYEMQDLQVIDILPQMIT
LSEAYIQIWKRQESAKDVNNHTGA
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgataaccgcagtggtttctccgaagcgtgaaagagaagatgatgtggacgaccaagac
gacgaagacgtagtgccagtcaaaaaaggacgaggtcgtgttgtggaggaccgaagaagc
cgccactgtccgtatcttgacaccataaacaggagtgtgctggattttgactttgagaag
ctctgctccatctctctctcacacatcaacgtttatgcctgcctcatatgtgggaagtat
tttcaaggtcgaggtctgaaatctcacgcgtacacccacagtgtccaatttactcaccat
gtgttcctcaacctgcacacgctcaagttttattgtctgcctgacaactacgagatcatt
gactcttcactagaagacattacgtacgtgcttaagccgacattcaccaagcagcacatt
tcgggtttggacaagcagggcaaactttaccgagcctacgatggcacgacttatttgcca
ggcattgttggcctcaacaacatcaaagccaatgactatgccaatgtggttttacaggcc
ttttccaacgtcccgccactgcggaattactttttggaggaggaaaactatcgaggcatc
cgaagaccaccgggggacatcatgttcctcctggtgcagcgctttggtgagctgatgcgc
aaactttggaatccccgaaacttcaaggcccatgtctctcctcatgagatgctccaggcc
gtggtgctttgcagcaagaagaacttccaaatcaccaagcaaggtgacgctgtggacttc
atgacgtggtttttaaatgcaatgcatagtgctctcggaggcacaaagaaaaagccaaca
atcctaacaaaagcgttccaagggtccatgcggatcttctcaaagaagctaccacaccca
gatttgacgccagaggagaaggaggcgctcctcctgaccagcgagtaccaggagcagatg
tccgagtccaccttttttttcttgaccctcgacctcccaacggcccccttgtacaaggac
gagaaggagcagctcatcatcccacaagttcctctcttcaacatccttggcaagttcaat
ggcagcacagagaaggagtacaaaacctacaaagagaacttcctgaaaagattccagttg
accaagcttccgccctacctcatcttttgcatcaaaaggttcacaaagaacaacttcttt
gtcgaaaagaaccccaccattgtcaacttccccatcaccaatgtagatctccgtgagtac
ttgaccgaagaagcgcaagtcacggagaagaacacgacgtacgaccttgtcgccaatgtg
gtgcacgacgggaaaccaactgaaggcgcttaccggatccatgtcctgcatcatggaact
ggaaagtggtacgagatgcaggacctgcaggtgatcgacatcctccctcagatgatcaca
ttgtcggaggcctacatccagatttggaagagacaggagagtgctaaggatgtaaacaac
cacactggtgcgtag
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