Syngnathoides biaculeatus (alligator pipefish): 133499081
Help
Entry
133499081 CDS
T09681
Symbol
ube3b
Name
(RefSeq) ubiquitin-protein ligase E3B
KO
K10588
ubiquitin-protein ligase E3 B [EC:
2.3.2.26
]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
133499081 (ube3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sbia04121
]
133499081 (ube3b)
Enzymes [BR:
sbia01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
133499081 (ube3b)
Ubiquitin system [BR:
sbia04121
]
Ubiquitin ligases (E3)
HECT type E3
133499081 (ube3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
DUF7462
Motif
Other DBs
NCBI-GeneID:
133499081
NCBI-ProteinID:
XP_061672603
LinkDB
All DBs
Position
4:complement(5290059..5309288)
Genome browser
AA seq
1067 aa
AA seq
DB search
MFGAPQSSKSEFLDKARQAREERKGQKEKERAAILIQALVRRFLFRCRLQKQIRKEVDDY
FESAAATSKRNALSIFKIARKLLFIFQLEDKARFEKLCRAILASMEVENEPKVWYVSLAL
SKDLTIPWLKQIKDVLWTCCQLLKNLKPDILQDNKLVTLYLTMLVTFTDTSTWRIVRGKG
EALRPALARICENIMGYLNQKGFYSTLQILLTNGLARSKPALSKGTLTAIFTLSLRPVIA
AHFSDNLLRSFLIHIMSVPAVTSHLCVLAPECISSIQTHGLLKKLIVFLSREEQCSDICV
CLEGSHTLCLLGNLIHLGFLNERIIEEETSRFVKDLTDMLSYCQRYVSQKKSNLTHWHPV
LGWFSQTVDYGLNESMPLVTKQLQYLWGVPVIRTLFSDVLSKKLESQEPSSSPALPSTSQ
NNLPVKSLFKRAFQKSASVRNILKPVGGKRVDSVEVQKVCSICVLYQTALSTLTQIRLQI
LTGLTHLDDLLPKLWAFICELGPQGGLKLFMECLNNDTEESKRLLAMLMLFCDCSRHLIT
ILDDIEVYEEQTSFKIEELLTISSFLNTFVYKMIWDGILENAKGEKLELFHSVHGWLMVL
YERDCRRRFTLDDHWLRKDLKPSLLFQELEKGKKRAQLLLQYIPHVIPHKNRVLLFRNIV
TKEKENLGLVETSSASPHVTHITIRRSRMLEDGYDQLRRLPVNSIKGVIRVKFVNDLGVD
EAGIDQDGVFKEFLEEIIKKVFNPALNLFKTTSGDERLYPSPTSYIHENHLQLFEFVGKM
LGKAVYEGIVVDVPFASFFLSQVLGHHHSTFYSSIDELPSLDSEFYKNLTSIKRYDGDVG
DLGLSLSYDEDVMGELVCHELIPGGKTMPVTNENKFSYIHLMAHFRMHTQIKEQTAAFIR
GFRSIINPEWLHMFSTPEVQRLVSGDNAEIDLDDLKKHTVYYGGFHSSHRVIIWLWDILS
SDFTAEERAMFLKFVTSCSRPPLLGFAYLKPPFSIRCVEVSDDQDTGDTLGSVLRGFFTI
RKKEPGGRLPTSSTCFNLLKLPNYSKKSILRDKLRYAISMNTGFELS
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atgtttggtgcgcctcaaagttcgaagtctgaattcctggacaaagccaggcaggccaga
gaggagaggaaaggtcagaaggagaaggagagggcggcaatcctcatccaagccctggtc
aggcgatttctatttcgctgcagactccagaagcaaataaggaaagaggttgatgactat
tttgaatctgctgctgcaacatccaaaagaaatgcactttcaatttttaaaattgctcgt
aaattactattcattttccagttggaggataaagcaaggtttgagaaactctgtcgagct
attctcgccagcatggaagttgaaaacgagcctaaagtctggtatgtgtctttggcgctc
tccaaagatctaacaatcccttggctaaaacagatcaaagacgtgctgtggacctgctgt
caactactgaaaaacttaaagcctgatatactgcaggacaacaaattggtaacactgtac
ctcaccatgctggtcacattcacagacacatcaacgtggcggattgtgagagggaagggg
gaagccctccggccggccttggcgagaatctgtgagaatatcatgggttacctcaatcaa
aagggattctattcaacactacagattttgctgaccaacggcttggcccgctccaaaccg
gctctctctaaaggcactttaacagcaatttttactctctcgttacgaccagtcatcgct
gctcacttctcagacaacctgctccgatcattcctcattcacattatgtcagttccagct
gtgacgtcacacctgtgcgtgctcgctccagagtgtattagttcgatccagacacatggg
cttttaaagaagctcatcgtatttctcagccgcgaggagcagtgttctgatatctgcgtg
tgtcttgaagggagccacacactctgcttactcggcaacctgatccacttgggcttcctc
aacgagcgaatcatagaggaggagaccagccgctttgtgaaggacttgactgacatgctg
tcctactgccagagatatgtgtcccaaaagaagtccaacctcacccactggcaccctgtc
ctgggctggttctcccaaactgtggactacggtcttaacgaatcgatgccgctggtcacc
aagcagctgcagtacctgtggggcgtgcccgtcatccggaccctcttcagtgacgtcctc
tccaagaagctagagagtcaggagcccagttcctcgcccgcactccccagcacatcccaa
aataacctgccggttaaaagccttttcaagcgggcgtttcagaagtccgcctccgtacga
aacatcttgaaaccagtgggggggaaaagagtggactcggttgaagttcagaaggtgtgc
agcatttgtgtcctctaccagacggcgctatccacgctgacgcaaatacggctccagatt
ctcaccggtctgacacatctggacgacctcctccccaaattgtgggctttcatctgcgag
ctcggcccgcagggaggcctaaaacttttcatggagtgtctaaacaacgacactgaagag
tccaagcggctcctcgctatgctcatgctgttctgcgactgttcacggcacctcatcaca
atcctggatgacatcgaagtctacgaagagcagacctctttcaaaatagaggagctcctc
accatctcctcatttctcaacacgtttgtgtacaaaatgatttgggatggcattctggag
aatgcaaagggggagaaactggagctattccacagcgttcacggctggttgatggtcctt
tatgaacgtgactgtcgccgacgattcaccctcgatgaccactggttacgcaaggactta
aaacccagtttgttgttccaagagcttgagaaaggcaagaaacgagcccagctgttactg
caatatatcccacacgttattcctcataaaaatagggttctgctgtttaggaacatcgtc
acgaaagaaaaagagaacctcggcttggtggagaccagctccgcctcgccgcacgtcacc
cacattaccattcgccgctcacgcatgttagaggacggttacgatcagctccgccgcttg
cctgtgaattccataaaaggcgtcattcgcgtcaagtttgtcaacgacctgggagtggat
gaagccggcatcgaccaagacggtgtctttaaagagtttctcgaagagattattaagaaa
gtgttcaaccctgctcttaacctattcaagacgacgagcggagacgagaggttgtacccg
tcgccgacttcctacatccatgagaaccacctgcagctgttcgagtttgtggggaagatg
ttagggaaagcggtttacgaggggattgtggtggatgtcccttttgcctcgtttttcctc
agtcaggttttgggtcatcatcacagcaccttctatagttccattgatgagctgccctcg
ctggactcggagttttacaagaacctcacgtccatcaagcgctatgacggagatgtaggg
gatctgggactttcgttgtcttatgatgaagatgttatgggagagctagtttgtcatgag
ctgatacccggagggaagaccatgcctgtcaccaatgaaaataagttcagctacatccac
ctcatggctcacttccggatgcacacgcagattaaggagcaaactgcagctttcattcgg
ggctttcgcagcatcatcaacccggaatggttgcacatgttttccacgcccgaggttcag
cgtctggtctcgggagacaacgctgaaattgacttggatgacctcaagaagcacacggtc
tactacggcggttttcacagcagccaccgcgtcatcatctggctttgggacatcttgtcc
agtgatttcacagctgaggagagggcaatgttcctcaaatttgtcacaagctgctcaaga
cctcctctcctaggttttgcctacctcaagccaccattttcgatccggtgtgtggaagtg
tcagatgatcaggacacgggggacaccctcggcagcgtcctcagaggctttttcacgatc
cgtaaaaaggagcccggcggccgactgcccacttcctccacttgcttcaacctgctcaag
ctgcccaactacagcaagaagagcatcttgcgtgacaagctgcgctacgccatcagcatg
aacaccggctttgagctttcgtag
DBGET
integrated database retrieval system
