Syngnathoides biaculeatus (alligator pipefish): 133499184
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Entry
133499184 CDS
T09681
Symbol
ppil2
Name
(RefSeq) RING-type E3 ubiquitin-protein ligase PPIL2
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
133499184 (ppil2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sbia03041
]
133499184 (ppil2)
03110 Chaperones and folding catalysts [BR:
sbia03110
]
133499184 (ppil2)
04121 Ubiquitin system [BR:
sbia04121
]
133499184 (ppil2)
Enzymes [BR:
sbia01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
133499184 (ppil2)
Spliceosome [BR:
sbia03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
133499184 (ppil2)
Complex C
U4/U6.U5 tri-SnRNP related factors
133499184 (ppil2)
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
133499184 (ppil2)
Chaperones and folding catalysts [BR:
sbia03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
133499184 (ppil2)
Ubiquitin system [BR:
sbia04121
]
Ubiquitin ligases (E3)
U-box type E3
133499184 (ppil2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Rtf2
zf-NOSIP
Motif
Other DBs
NCBI-GeneID:
133499184
NCBI-ProteinID:
XP_061672845
LinkDB
All DBs
Position
4:complement(33825923..33851971)
Genome browser
AA seq
526 aa
AA seq
DB search
MGKRQHQKDKMYITCTEYTNFYGGKRAEIPQANFRRLPFDHCSLSLQPFSYPVCTADGVV
FDLLSIIPWIKKYGINPISGEKLEAKSLVKLNFFKNNEGKYHCPVLYSVFTNNSHIVTNK
VTGNVFSYEAVEQLNIKTKSFKDLLTDENFTRKDIITLQDPTNLDKFNVANFFHVKNDLK
VLDPDEEKAKQDPLYHLKTTNLETRETLAELYKDYKGDQLLAATMKEPEAKKTDKLNTAH
YSTGRVAASFTSTAMTPATTNKADAIADDTVRYSYIKKKGYVRLHTNKGDLNVELHCDKI
PIAGENFIGLCKKGYYDGTIFHRSIRNFMIQGGDPTGTGTGGESFWGKPFKDEFRPNLSH
TGRGILSMANSGPNTNKSQFFITFRSCTYLDRKHTVFGRVVGGFETLTAMENVESDTKTD
KPKSEIKIISASVFVDPYEEADAEIAAEREKELQKKMEEEQQASASLRKAKEEQAPKAFK
QGVGKYINPTAAKRSTTEEENGPSTSSAAPAKKPKGKSTFGDFSSW
NT seq
1581 nt
NT seq
+upstream
nt +downstream
nt
atggggaagcgacagcaccaaaaagacaaaatgtacattacgtgtacagagtataccaac
ttctatggagggaagcgggcagaaatcccgcaggctaacttcagacgtcttccgtttgac
cactgcagtttgtcccttcagccattttcttatcctgtgtgcactgccgatggtgtcgtc
tttgatctgctgagtattattccatggatcaagaagtatggaattaatcccatatctgga
gagaaactggaagccaagtcgctcgtcaagctcaactttttcaagaacaatgaaggcaaa
taccactgtcccgttctgtactctgtcttcacaaacaactctcacatcgtcacaaacaaa
gtcactggcaatgttttctcctatgaggcagtggagcaactcaacatcaagaccaaaagt
ttcaaagatctgctgactgatgaaaattttaccagaaaagacattatcacacttcaagat
ccaacaaacctggacaagttcaatgtcgccaactttttccacgtgaagaatgacctcaaa
gtgctggatccagatgaggagaaggccaagcaggacccattgtaccacttgaagaccacc
aacctggagacccgggagaccctggctgagctgtacaaagattacaagggggaccagcta
ctggctgccaccatgaaggagcctgaggccaagaaaacagacaagctcaacacggcccac
tactcgacgggcagggttgctgcctccttcacgtccacggccatgacgccagccaccacc
aacaaagcagacgccatcgctgatgacactgtgcgctacagctacatcaagaagaaaggc
tacgtccgcctacacaccaacaaaggagacctcaatgtggagctacactgtgacaagatt
ccaatagcgggagagaacttcattggcctttgtaaaaaaggctactacgacggcacaatc
ttccacaggtccatccggaatttcatgattcaaggaggcgatcccaccggcacgggcaca
ggtggagaatccttctggggaaaacctttcaaagacgaattccgacccaacttgtcccac
acgggccgcgggattctgagcatggccaattcgggtccaaacaccaacaaatctcagttc
ttcatcacattccgctcctgcacctatcttgacaggaaacacacagtctttggaagggtt
gtcggtggctttgaaacgttgacagccatggagaatgtagagagtgacaccaaaacagac
aaaccaaagtctgagatcaagatcataagcgcaagcgtgttcgtagacccgtacgaagag
gctgacgccgagatcgcggccgagcgtgagaaggagcttcaaaagaagatggaggaggag
cagcaggccagcgcctccctgaggaaggccaaggaagagcaggcacccaaggccttcaag
caaggcgtgggcaaatacatcaaccccaccgccgcgaaacgttcgacgacagaagaagaa
aacggaccttctaccagcagcgccgcccccgccaagaagccgaaaggaaagagcaccttt
ggagactttagctcgtggtag
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