Syngnathoides biaculeatus (alligator pipefish): 133499229
Help
Entry
133499229 CDS
T09681
Name
(RefSeq) tetratricopeptide repeat protein 28-like isoform X1
KO
K24936
tetratricopeptide repeat protein 28
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
sbia03037
]
133499229
Cilium and associated proteins [BR:
sbia03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
133499229
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
CHAT
TPR_2
TPR_8
TTC28_C
TPR_10
TPR_MalT
CFAP70_TPR_C
TPR_16
TPR_SusR
RPN7
TPR_11
DUF6340
TPR_14
TPR_BSK1_C
TPR_NPHP3
TPR_9
TPR_6
PUB
TPR_19
TPR_YpiA_C
AP4E_app_platf
Motif
Other DBs
NCBI-GeneID:
133499229
NCBI-ProteinID:
XP_061672969
LinkDB
All DBs
Position
4:3262491..3469754
Genome browser
AA seq
2465 aa
AA seq
DB search
MEKQATLKEKVSTSGARAAGRPARRASGDAGRGPGKGEFAEKVQRSNELCQRGDFQAAVD
LYGEALRADAQNCILYGNRSAALLKLGRHQAALDDAEKARVLNPKWPKAYFRQGVALQYL
GRHADALAAFASGLAQDPKSLQLLVGMVEAAMKSPMRESLEPTYQQLQKMKLDKSPFVVV
SVIGQELLTAGHHTASVVVLEAALKIGTCSLKLRGSVFSALSSAHWSLGNTEKSTGYMQQ
DLEVAKTLGDQTGECRAHGNLGSAFFSKGNYREALTNHRNQLVLAMKLKDREAASMALSS
LGHVYTAIGDYPNALASHKQCVLLAKQSKDQLSEARELGNMGAVYIAMGDFDNAVQCHEQ
HLGIAKALENKREEARAYSNLGSAYHYHRNFDKAMSYHTHVLELAQELEEKSIEMRAYAG
LGHAARCMQDLERAKQYHEQQLSIAEGLKDRAAEGRASSNLGIIHQMKGDYETALKLHKT
HLAIAQELNDYAAQGRAYGNMGNAYNALGAFDQAVRYHRQELQISMEVNDRASQASTHGN
LAVAYQSLGAHDRALQHYQNHLNIARELRDVQSEARALGNLGNFHCSRGEFPQAVPYYEQ
YLRLSPDLQDMESEGKVCHNLGYAHYCLGNYQDAVKYYEQDLALAKDLHDKLSQAKAYCN
LGLAFKALGDFAKAEECQKYLLSLAQSLNNSQARFRALGNLGDIFVCKKDVAGAIQFYEQ
QLALAHQVKERRMEACAYAALGATYRLVHKYDKALGYHTQELEVYQELGDMSGECKAHGH
LAAVYMALGKYAMAFKSYEEQLELGQRLKDPVVEAQVYGNMGITKMNVGVMEEAIGYLEQ
QLATLQQLSGNEAVMDRGRAYGNLGDCYEALGDFEEAIKYYDQYLSVAQSLNRMQDQEKA
YRGLGNGHRATGNLQQSLVCFEKRLVVAHELGECGVKAQAYGELGALHSQLGNYEQAISC
LERQLVIARDTQDRLLEGDASCGLGAVYQTMGEYETALRCHQSDLEIAEEAGSPARQARA
YGNLGLTYESLGNYERAVVFQEQHLSVAAQTNDLAAKTLAYGSLGRTHHALQNYSQAVMY
LQEGLRLAEQLARREEEAKIRHRLGLSLWASGNLEEAQHQLYRASALFETIRHEAQHSTD
YKLSLFDLQTSCYQALQRVLVSLGHHDEALAVAERGRTRAFADLLVERQTGQQDSDPYTP
VTVEHILDTVNSQRALVLYFSMAAGYLYSWLLAPGAGILKFHEVYLGEGISEVGSDFQEG
GGGLVGALSLEQHIASAREALGVESYYSRGCSSSETESEAGDLLDQQFEELNNKLNSVTD
PTGFLRMVSRNNLFNRSCQSMTSLFSNTMSPAKDGCSSLPHRSGNLGKPPLRALYDLLIA
PMEGGLMHSSGPVGRHRQLVMVLEGELYLIPFALLKGSSSNEYLYERFSLIAVPSIQGLG
SGAKVHSRRPGPAPCGGVSMAAVVGNPRLPSPVMDRWLWGPMPSAEEEALMVAELLGCQP
LSGTAATKERVMSALTQAECAHFATHISWKLAALVLTPNPESLPGAASANVGGGTIGRGT
GIRRGSSGRGRKGSVGSGYTNPESHLLQDDSSDVDSICDSPPLQEFLLTAADILDLRLPV
KLVVLGSYLESSSKVTADGVVGLTRSFLAAGAQCVLVSLWPVPVAASKVFIHAFYTALLN
GTKASAALADAMKTVQSSKQYSHPSNWAGYMLIGTDVKLNSPSSLIGQALAEILQYPDRA
RDALRVLLHLVEKSLQRIQNGQRNSMYTSQQSVENKVGGVPGWQALLTAVGFRLDSAGTG
IPAAVFFPTADPGDRLQQCSTTLQSLLGLPPQALQALCKLITASEAGEQLINRLHQVLVQ
LQTGEKEQDFSLLPIQVSISVQLWRLPGCHEFLAALGFDLCEVGQEEVVLKTGKLANRRT
LHFALQSLLALFDSTELPKRLSLDSSSSLESLASAQSVSNPLPMGYSSLPFSPHCLDNQA
SDAISVYSLSSVASSMSFASKSDCDFLSHRHRSGAAAHYAAHKHPHVPRSRSSPHGAATA
TSGARGEEEEYEGFSIISSEPLGSHCDSLPLPPGHSQRHHRGGRGVAARSASGAGRGYSV
SVSSRGSVSTPTSPVKTCLVPSPNSPFQKVAKVTSSDTGESDQSSTETDSTVKSQEEKSP
PLDPQELAQKILEETHSHLRAVGSLQRARAEGGTSRGNSPGSSAFRSSETSAFSRPNSSA
SGRAQSSPKPKPPSRSSSLQKISSGYNSPAVSESSQKDGSHPSPISDSHAQFKLKYPSSP
YSGHISRSPSNVSPSSGHQSPVGSSAPSPALSYSSTGSATSADVPDLDRLRRGVIDEKVQ
AIHNLKTFWANAAAQQHLGPIKAVHSSPSPLASASRDVLSLLNLSPRHCSPNDTQDSLEL
RDLGLQSVERGGKNSNGHHCSSPKKGAPSPTISTSSSPGARSIRLPAGNGYKFLSPGRFF
PSSKC
NT seq
7398 nt
NT seq
+upstream
nt +downstream
nt
atggagaaacaagcgactctgaaagaaaaggtttcaacctccggcgctcgggccgcgggc
cgccccgcgcgccgcgcctcaggagacgccggccgcggtccgggcaagggcgagttcgcg
gagaaagtgcagcggagcaacgagctgtgccagcggggcgactttcaggcggccgtggac
ctgtacggcgaagccttacgagcggacgcgcagaactgcatcctgtacggcaaccggtcc
gccgcgctcctcaaactgggccggcaccaggctgcgctggacgacgcagaaaaagctcgc
gtgctcaacccaaaatggccaaaggcatacttccgacagggtgttgcccttcagtacctc
ggtcgccatgccgacgccctggccgcctttgcctccgggctggcccaagaccccaagagt
cttcagctcctggtgggcatggtagaagccgccatgaaatctcctatgcgggagtctctc
gagccaacttatcaacagctgcaaaagatgaagctggacaagagtccctttgtggtggtg
tctgtgatcggccaggagctgctgacagctggccaccacacagcttctgtcgtagttcta
gaagcggctttgaagatcggcacgtgcagcctcaagctgcgaggctcggtcttctcggcc
ctcagcagcgcccactggtctctgggcaacacggagaagagcaccggctacatgcagcag
gacttggaggtggccaagaccttaggtgaccaaacaggggaatgccgtgctcatgggaat
ttaggctcggcattcttctccaagggaaactatcgtgaggctttgaccaaccatcggaac
cagctggttctcgccatgaagctgaaagacagagaggctgcctcgatggccctgagcagc
ttgggccacgtctacacagccatcggagactacccaaatgcactggccagccacaagcag
tgtgttctcctggctaagcagtcgaaagatcagctctctgaggcgcgagagctgggaaac
atgggtgccgtctacatcgccatgggagactttgacaacgccgtccaatgccacgagcag
cacttgggcatcgccaaggccctcgaaaataaacgggaggaggcccgggcctacagtaac
ctaggcagcgcctaccattatcaccgaaactttgacaaggccatgtcttaccacactcac
gtgctggagctcgcccaggaactggaagaaaagtccatcgagatgcgggcgtatgcgggt
ctgggccacgcggctcgctgcatgcaggacctggagagggccaagcagtatcatgaacag
cagctgtccatcgctgaaggtttgaaagaccgagcggcggaggggagggcctcctccaat
ctgggcatcattcaccagatgaaaggagactacgagacggcactgaaactccacaaaacg
cacctggccattgctcaggagctcaacgactacgccgcgcaggggcgggcctacggaaac
atgggcaatgcctacaatgcccttggagcctttgaccaggccgttcgctaccaccgccag
gagctgcagatctccatggaggtcaacgaccgggcctcgcaggcatccactcacggcaat
ttggccgtggcttaccaatccttgggagcccatgaccgggctttgcagcattaccagaac
catctcaacatcgctcgcgagctcagagacgtccagagcgaggcgcgagccctgggtaac
ctcggcaactttcactgctctcgtggagaattccctcaggcggtgccgtattacgagcag
tacctgcgcctttcccctgacctccaagacatggaaagtgaagggaaagtttgccacaat
ctgggctacgctcactactgcctgggcaactaccaggatgctgtcaaatactacgagcag
gacctggctttggccaaggaccttcatgacaaactcagtcaagccaaggcctactgtaat
ctgggtttggctttcaaggccctgggagactttgcaaaggcagaggagtgtcagaaatat
ttgttgtcgctcgcccaatccctgaacaattcccaggctcgcttccgagctctgggcaac
ctgggggacatatttgtctgtaaaaaagacgtggctggagccattcagttttatgagcag
cagttggccttagctcatcaggtgaaggagcgtaggatggaggcctgtgcctacgctgcc
ctcggggccacttacagactcgtgcataagtatgataaagctctcggctaccacactcaa
gagctggaggtctaccaagagctcggggacatgtctggagagtgcaaagctcacggacac
ttggcggcagtctacatggccttggggaagtacgccatggccttcaagagctacgaagag
cagttggaactaggccagaggttgaaggatcctgttgtggaggcacaggtgtatgggaat
atgggcataacaaaaatgaatgtcggggtgatggaggaagcgattggatacctggagcag
cagcttgctactttacagcagctaagtggcaacgaggcggtaatggacaggggcagggcc
tacggaaacctcggggactgttacgaggccctcggtgactttgaggaagccatcaagtac
tacgaccagtatttgtcagtagcgcagtctctcaaccgtatgcaggaccaggagaaggcg
tatagaggcttggggaacggacacagggccacgggaaacctgcagcagtcgctggtgtgc
ttcgagaagcggctggtggtggctcacgagctgggcgagtgcggcgtcaaggctcaggcc
tacggcgaactgggcgccctccacagccagttaggcaactacgagcaggccatctcttgt
ctggagcgccagttggtcatcgcccgcgacacccaggatcgacttctggagggcgacgcc
agctgcggtctgggcgctgtttaccaaacgatgggagagtatgagacagcgctgcgatgc
caccagagcgacctcgagatcgcggaggaagccggaagccccgcccgccaggctcgtgcc
tacgggaacctgggccttacctacgagtctctgggaaactacgagagggccgttgtgttc
caagagcagcacctcagcgtggcagctcagactaatgacttggctgccaagacgctagcc
tacggcagcctggggcggacacaccacgcgctgcagaactattcgcaagctgtcatgtac
ctgcaggaaggcttgcggctggcggagcagttggcccggcgcgaggaggaggcgaagatc
cgccatcgtctggggctgtctctgtgggccagtgggaatctggaggaggctcaacatcag
ctttaccgggcctctgcactgttcgagaccatcagacacgaagcacagcacagcacagac
tacaagctttccctgttcgacctgcaaacgtcttgctaccaggctctccaaagggtcctc
gtcagcctaggtcaccacgacgaggctctggcggtggcggagcgaggacgtacgcgagct
ttcgcagaccttttggttgaaaggcagacgggccagcaggactcggacccctacacccca
gtaacggtggagcacattttggacaccgtcaatagccagagggccttggtactttatttt
tccatggctgctggttacctgtacagctggctactagcaccaggagcaggcatcctgaag
ttccacgaggtgtatttgggtgaggggatatcggaagtagggtcggacttccaggagggc
ggcggaggcttggtcggtgccttgtcgctggagcagcacatagccagcgcacgagaggcc
ctgggggtcgaatcgtattacagcagggggtgttcaagcagcgagacggagagcgaggcg
ggagatttgttggaccaacaatttgaggagttaaacaacaagcttaactctgtcacggat
ccgacaggcttcttgcgcatggtgtccagaaacaacctcttcaacaggagctgccagagc
atgacgagcctgttcagtaataccatgtctcccgccaaagacggttgttcttccctgcct
catcgctccggcaacctcgggaagcctcccctcagagcgctttacgatctgctcattgca
cctatggaagggggtttgatgcactccagtggtccggtgggcagacacagacaactggtc
atggtcctggagggagaactttatctgatccctttcgcgctgctcaaaggaagttcatcc
aacgagtatctttatgagcgtttcagcctcatcgccgttccctcaatccagggcctcggc
tcaggcgcaaaggttcactcccggcgtcctggtccggctccctgcggtggggtttcaatg
gcagcagtggtgggaaaccctcggctgccctcgccagtcatggaccgctggctgtggggg
ccaatgccctctgcagaagaggaggcactcatggtcgctgagctccttggatgccaaccg
ctgtctggcactgcagcgactaaagagagggtcatgagcgccctcacacaagccgagtgt
gcccacttcgctactcacatttcatggaaattggcggctctggtgctcactccgaacccg
gaaagcctgcccggtgcagcgagtgcgaacgtgggagggggaacaatcggtcgaggtacc
gggataaggagaggaagcagcggtcgaggcaggaaggggtcggtcggaagcggctacacc
aaccccgagtcgcacctcttgcaagatgacagcagcgatgtggacagcatctgcgacagt
ccacctttacaggagtttctcttgaccgctgcggatatattggacctcaggctgcctgtc
aaactcgtcgtgctcggttcctacctggagtccagcagcaaggtgacagccgacggtgtc
gtcggcttgacgcggtccttcctggccgcgggggcgcagtgtgttctggtgtccttgtgg
ccggtccctgtggcggcctccaaggttttcatccacgccttctacactgccctcctcaac
gggaccaaggctagtgctgcactggcagatgccatgaaaactgtacagagcagcaagcag
tactcgcatccttctaactgggcaggatacatgctgatcggcactgatgtgaaactcaac
agcccgtcctccctgatcggacaagctttggcagaaattctccagtatcccgatcgtgca
cgggacgccctgagagttttacttcacctggtggaaaaatcacttcaaaggatccagaat
ggccaacgtaactcaatgtacacgtcccagcaaagtgtggagaataaagttgggggagtc
cccgggtggcaggccttgttaaccgccgtgggcttccgcctcgactctgcgggcaccggc
atccccgcagcagtttttttccccactgccgacccaggagaccggctccagcagtgcagt
accactttacagtcacttctaggtctgccgccacaagccctccaggctttatgcaaactc
atcacagcttctgaggcaggggagcagctcatcaatcggctccaccaggtgctagtgcag
ctccagactggtgagaaggaacaggacttctctctcctgcccattcaggtgtccattagt
gtgcaactgtggagacttccaggatgccatgaatttttagcagcgcttggttttgatctg
tgtgaggtaggccaagaagaagtggtgctaaaaaccggcaaactagccaaccgccgcacg
ttgcactttgctctgcagtctctgctggcgctatttgactccacagaacttccaaagcgt
ctgagtctagacagctcgtcttccctcgagtctttggcctcagcgcagtctgtttccaac
cctctgccgatgggttattcaagccttcccttctctccccattgcctggacaatcaggca
tcagacgccatctctgtctatagcctcagctctgtggcctcctcaatgagcttcgcttcc
aaatccgactgcgacttcctcagccatcggcaccgcagcggggccgcagcacactacgcg
gcccacaagcaccctcacgttccccggagccgctcgtctcctcacggagcagcgaccgct
acgtcgggagcccggggggaggaggaggaatatgagggcttctctattatcagtagcgaa
ccgctcgggagccactgtgactcgttgcctctgccaccgggccacagccagcgccaccac
agaggaggtagaggggttgcagctcggtcagccagtggggctggaagaggttactcggta
tcagtgtcatcaagaggcagcgtcagtactccgacttcccccgtcaaaacatgcctggtc
cccagtccaaactcaccgttccagaaagtcgctaaagtgaccagctcagacacaggggaa
tcggatcaatccagcactgagacagacagcactgtgaagtctcaggaggagaaaagtccc
cctcttgatcctcaggagctggcccagaagattctggaggagactcacagccatctccgg
gcagtcggtagtctgcagcgagccagggccgagggtggaacttcgagaggaaattcacca
gggagtagcgccttccgctcctcggaaacgagtgcgttcagccgtcctaacagcagtgca
agtggcagagctcagtcttccccaaagcccaaaccgccatcccgctcatcttctctccag
aaaataagctctgggtacaatagtccggctgtctcagagtcttcacaaaaggacggcagc
catccttcgcccatctcggacagccatgcgcagttcaagctgaagtacccaagctccccg
tacagtggccacatatcacgttcccccagtaacgtttctcccagttcaggtcaccaatca
ccagttggtagtagtgcgccctcccctgccctatcgtactcatctacaggctctgccacg
tctgctgacgttccagacctggaccgactaagaagaggggtcattgatgaaaaagtccaa
gccatccacaatctgaaaacgttttgggcaaacgctgccgcccaacaacatcttggcccc
atcaaagctgttcatagttccccgagtccgctggcatctgccagtagggacgtactgagc
cttctgaacctctctccgcgacattgctcccccaatgatacccaagacagcctggagctg
cgggacctgggactgcagtcggtggagagagggggcaagaactccaacgggcatcactgc
tccagtcccaagaaaggggccccatcacccacaatttctacaagcagcagtcccggtgcc
cgctcgattagactacccgctgggaacggatacaaattcttgtcgcctggaagatttttc
ccttcttctaaatgctga
DBGET
integrated database retrieval system
