Syngnathoides biaculeatus (alligator pipefish): 133499278
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Entry
133499278 CDS
T09681
Symbol
smarca2
Name
(RefSeq) probable global transcription activator SNF2L2
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
133499278 (smarca2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbia03021
]
133499278 (smarca2)
03036 Chromosome and associated proteins [BR:
sbia03036
]
133499278 (smarca2)
Transcription machinery [BR:
sbia03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
133499278 (smarca2)
Chromosome and associated proteins [BR:
sbia03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
133499278 (smarca2)
Chromatin remodeling factors
BAF complex
133499278 (smarca2)
PBAF complex
133499278 (smarca2)
GBAF(ncBAF) complex
133499278 (smarca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
133499278
NCBI-ProteinID:
XP_061673119
LinkDB
All DBs
Position
4:complement(26293895..26356994)
Genome browser
AA seq
1578 aa
AA seq
DB search
MSNPSDLSVGMSHPGPSPGAGLSPGPILGPSPGPDPSPGSVHSMMGPSPGPGTPNGSHGM
QAQAQGDFSQDVMYSMHKPMEGMNDKAMSDAIHFGHMKGVGMRTLHSGMGPPQSPMDQHS
QGYMSPHPSPMGVHEHASSPMAAGSGPTPPHVPPSQPGPMMAMDPQGGGNSGGVPNMSAM
GQQGRGPTAFSQAQLQQLRAQILAYKVLGRGQPLPENLQMAVQGKRSLPTMQQHQQQSQS
GSPYNRPQGMPMAPLGGAQSSPCPTPSMQGHNQGTGPKPWSDGQGGDNPSGAPKHLAPVS
GGRPSPAPPQATAVPTGPLPGSSVAPQPMGQQVSPMLQMQQKQNRVTPIQKPQGLDPVGI
LQEREYRLQARIAHRIQELESLPGSLPPDLRTKATVELKALRLLNFQRQLRQDVVACMRR
DTTLETALNSKAYRRSKRQTLREARMTEKLEKQQKLEQEKKRRQKHQEYLNSILQHAKDF
KEYHRSMSGKMQKLTRAIATWHTNTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKK
DKRLAYLLQQTDEYVANLTTLVYEHKAAQAAKEKKRRKKKKRVEGEGGEGTSAIGPDGEP
MDESSQMSELPVKVIQTETGKVLQGTDAPKSSQLEAWLEMNPGYEVAPRSDSEESSSEFE
EEEEEETGKGENDKTIEDPIVEAKHIIESAKQDVDDEYSVPTDETSLQSYYGVAHAVIER
VEKQSSLLINGSLKHYQIQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKR
LNGPYLIIVPLSTLSNWIYELDKWAPSVVKIAYKGTPGLRRGLVPQLRSGKFNVLLTTYE
YIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLLTGTPLQNKLPEL
WALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLK
KEVESQLPEKVEYVIKCDMSAIQKVLYRHMQKGILLTDGSEKDKKGKGGAKTLMNTIMQL
KKICNHPYMFQHIEESFAEHLGYPSGIISGPDLYRASGKFELLDRILPKLQATNHRVLLF
CQMTSLMTIMEDYFGYRNFQYLRLDGTTKSDDRALLLKKFNESGSQYFIFLLSTRAGGLG
LNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKL
NVDQKVIQAGMFDQKSSSHERRVFLQAILEHEEQNEEENEVPDDETLNQMIARNEEEFEL
YMRFDMDRRREDARNPKRKPRLMEEDELPSWIIKDDAEVERLTYEEEEEKMFGRGSRCRR
DVDYSDALTEKQWLRAIEDGNLEEMEEEIRLKKRKRKRRQDKEPLSREDWGGKAKKRRGR
PPAEKLSPNHPKLTKQMNTIIDTVINYRDGAGRQLSEVFIQLPSRKELPEYYELIRKPVD
FKKIKERVRSHKYRSVGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAK
DEESEDDSEDDEDEDDEEESEAEAKPVWVKIKLNKESRKSAERGKKRQSRAKAKPVVSDD
ESDDDQDGNEQSDMSDDE
NT seq
4737 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacccttcagacctgtcagttggtatgtcccatcctggcccttccccgggtgcg
ggcctttcacccggtcctatcctgggacccagccccggaccggacccttcacccggctcc
gttcacagcatgatgggacccagccccggccctggaacccccaacgggtcccatggcatg
caggcgcaggcacagggtgacttctcgcaagatgtcatgtattccatgcacaagcccatg
gaaggaatgaacgacaaagccatgtctgatgcgatccactttggtcacatgaaaggtgtg
ggcatgagaaccctccacagtggcatgggccccccacagagccccatggaccagcatagc
cagggctatatgtccccccatccttctccaatgggcgtacatgagcatgcatccagccct
atggctgcgggcagcggacccacaccccctcatgttcctccctcccagccaggccccatg
atggccatggacccgcaaggaggtggcaacagtggcggcgtacccaacatgtccgcaatg
ggccagcagggccgggggccaactgcgttcagtcaggcacagctgcaacagctcagggct
cagatcctggcttacaaggtccttggccgtgggcagccactgcccgagaacctccaaatg
gcagtgcagggcaagaggagcctacccacaatgcagcaacaccagcagcagtcacagagt
ggtagtccttacaacaggcctcaaggcatgccaatggcacctttgggtggagcgcagtcc
agtccttgtcccactccatccatgcaaggtcacaatcaaggcactggacccaaaccttgg
tctgatggccaaggcggtgataatccatctggtgcccccaagcacctcgcccctgtcagt
ggcggccgcccatcgcccgcgcccccccaggccacagctgtgccaactgggccattgcca
ggcagctcagtcgctcctcaaccaatgggccagcaggtgtcccccatgctgcagatgcaa
cagaagcagaaccgtgtcacacccattcagaagccacagggcctggacccagtgggcatt
ctgcaggagagagaatataggctgcaggctcggattgcgcatcgcatccaagaactggag
agtctgccgggctccctgccacccgacctgaggaccaaggctacagttgagctcaaggca
ctccggctcctgaactttcagcgacagctgaggcaagatgtggtggcatgtatgcggcgg
gacacaaccctcgagacagccctcaactccaaggcgtaccgtcgcagtaagcgacagacg
ctgcgggaggcacgtatgacagagaagctagagaagcagcagaagctggagcaggagaag
aagcgccggcagaagcaccaggagtacctcaacagtattctccagcatgccaaagacttt
aaggagtaccaccgatctatgtcggggaaaatgcagaagctcacccgagccattgccacc
tggcacaccaacacagagcgggagcagaagaaagagacagagaggatagagaaggagaga
atgagaagacttatggccgaggatgaggagggctatcgaaaacttatcgaccagaagaag
gacaagcgtctagcgtaccttctgcagcagactgatgagtatgtggccaacctcaccaca
ctggtgtatgagcacaaagctgcacaggcggcgaaggagaagaagcggaggaagaagaag
aagagggtggagggagaaggtggtgaaggtaccagtgccattggacctgatggagagccg
atggacgaaagcagccagatgagtgaactacccgtcaaggtgatccaaacggagactggt
aaagttttgcagggcacagatgcacctaaatccagccagctggaggcctggttagagatg
aaccctgggtacgaagtggcgccaaggtcggacagtgaggagagtagttctgagtttgag
gaagaggaggaagaggaaacaggcaagggcgaaaatgacaagacgatagaagatcccatc
gtagaggccaagcacattatcgagtcagctaagcaggacgtggacgatgagtacagtgtg
ccaacggatgagaccagcctacagtcctactacggcgtggcgcatgctgtcattgagagg
gtggagaagcagtcatctcttctgatcaacggctcactcaaacactaccagattcagggt
ctggagtggatggtgtccctgtacaacaacaacttaaacggcatcttggctgacgagatg
ggcctgggcaagaccatccaaaccatcgccctcatcacatacttgatggagcacaaaagg
ctcaacggcccctatctcatcatcgtgccactttcgactttatccaactggatatacgag
cttgacaagtgggccccatctgtggtcaaaattgcttacaagggtacccccggcctgcgc
aggggactggtgccgcagctccggagtgggaaatttaacgttttgttgaccacctacgaa
tacatcatcaaggacaagcacatactggccaagatccgttggaagtatatgatcgtggac
gagggccaccgtatgaaaaaccaccactgcaagctgacacaggtgttaaacacgcactac
gttgcgccacgtcgcctgctgctcactggcacaccactgcagaacaagcttcctgagcta
tgggcgctgctcaacttcctgctgcccacaatcttcaagagctgcagcacctttgagcag
tggttcaatgctccatttgccatgacgggcgagagggtggacctcaatgaagaggagaca
atcctgattattcgacgtctgcacaaggtactcaggcccttcctactgcgccggctaaag
aaggaggtggagtctcagctgccagagaaggtggagtatgttatcaaatgtgacatgtct
gccatacaaaaagtcttataccgacacatgcagaagggaatcctcctcaccgacggctca
gagaaagacaagaagggcaaaggtggtgcgaagaccctgatgaataccatcatgcaactg
aagaagatctgcaaccacccatacatgttccagcatatcgaggagtcgtttgctgagcat
ttgggctaccccagtggcatcatcagcggaccagacctgtatcgagcctccgggaagttt
gagctcctggaccgcattcttcccaagctgcaggccaccaaccaccgggtgctgctcttc
tgccagatgacctcactcatgaccatcatggaggactactttggctaccgcaactttcaa
tatttgcgtctggatggaaccactaagtcggacgatcgagcattgctgttgaagaagttc
aacgagtcgggatcgcagtacttcatcttcctcctcagcacccgggccggcggccttgga
cttaacctgcaggccgctgacacagtcatcatctttgacagtgactggaacccacatcag
gacctccaggcgcaggaccgcgcgcaccgcatcggccagcagaatgaggtgcgcgtgctg
cgcctgtgcacagtcaacagcgtggaggagaagatcctggcagctgccaagtacaagctc
aatgtggaccagaaagtgatccaggccggcatgttcgaccagaagtcgtccagccatgag
cgccgcgtcttcctgcaggccatcctggagcatgaggaacagaatgaggaagaaaatgag
gtaccagacgatgaaaccctgaaccagatgattgcccgcaatgaagaggagtttgagctt
tacatgcgctttgacatggaccggcggcgggaagatgcccggaaccctaaacgtaagcca
cgcctcatggaggaggacgagctgccctcgtggatcatcaaggatgatgctgaggtggag
cgcctcacatatgaggaggaggaggaaaagatgttcgggcgaggttcccgctgccgccgg
gatgtggattacagcgacgcactaactgaaaaacagtggctacgggctatcgaggacggc
aacctggaggagatggaggaggagatccgactcaagaagcgcaaacgcaagaggcgtcaa
gacaaagagccattgagcagggaggattggggcggtaaggccaagaagaggcgagggcgc
ccgcccgctgagaagctttcccccaaccaccccaaactcacaaaacagatgaacaccatc
atcgacaccgtcattaactacagagatggggctggcagacagctcagcgaagtctttatc
cagctgccgtccagaaaggagcttccggagtattacgagctgatccgaaagccagtggat
ttcaaaaagatcaaggaacgcgtcaggagccataaataccgcagtgttggagacctggag
aaggacgtcatgttgctctgtcacaacgcgcagaccttcaacctggagggatctcaaata
tacgaggactccattgtgctccagtcagtcttcaaaagcgccaggcagaagatcgccaaa
gacgaggaaagcgaggacgacagtgaagatgatgaagatgaggatgatgaagaagagtca
gaggctgaggccaaaccagtgtgggtgaagatcaagctaaacaaggagtcccgcaagagt
gcagagcgaggcaagaagaggcagagccgagccaaggccaaacccgtggtcagtgacgat
gaaagcgatgatgaccaggacggcaatgaacaatctgacatgagcgatgacgagtga
DBGET
integrated database retrieval system
