Syngnathoides biaculeatus (alligator pipefish): 133499316
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Entry
133499316 CDS
T09681
Symbol
vcp
Name
(RefSeq) transitional endoplasmic reticulum ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04137
Mitophagy - animal
sbia04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
133499316 (vcp)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
133499316 (vcp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbia03019
]
133499316 (vcp)
03009 Ribosome biogenesis [BR:
sbia03009
]
133499316 (vcp)
04131 Membrane trafficking [BR:
sbia04131
]
133499316 (vcp)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sbia04147
]
133499316 (vcp)
Messenger RNA biogenesis [BR:
sbia03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
133499316 (vcp)
Ribosome biogenesis [BR:
sbia03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
133499316 (vcp)
Membrane trafficking [BR:
sbia04131
]
SNARE
SNARE associated proteins
Others
133499316 (vcp)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
133499316 (vcp)
Exosome [BR:
sbia04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
133499316 (vcp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
IstB_IS21
ATPase_2
AAA_18
AAA_7
ATPase
ABC_tran
DUF815
AAA_24
NB-ARC
TsaE
ResIII
Sigma54_activat
NACHT
Viral_helicase1
SLFN-g3_helicase
KAP_NTPase
Zot
Motif
Other DBs
NCBI-GeneID:
133499316
NCBI-ProteinID:
XP_061673196
LinkDB
All DBs
Position
4:5772169..5783048
Genome browser
AA seq
806 aa
AA seq
DB search
MASGGESKNDDLATAILKQKNRPNRLIVDESINEDNSVVSLSQTKMDELQLFRGDTVLMK
GKKRRETVCIVLSDDTCSDEKVRMNRVVRNNLRVRLGDVISIQPCPDVKYGKRIHVLPID
DTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKVVETDPSPYCIVAPDT
VIHCEGEPIRREDEEESLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRG
ILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAI
IFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRF
GRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHGHVGADLAALCSEAAL
QAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFKWALSQSNPSALRETVVEVPNITWEDIG
GLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIANECQANFI
SIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNVGDGGGAADRV
INQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDEKSRMSILKAN
LRKSPISKDVNLDYLAKMTNGFSGADLTEICQRACKLAIRESIENEIRRERERQTNPLAM
EVEEDDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGSFRFPNSTTGG
SGPSHGSGGSGTGPVFNEDNDDDLYG
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgggcggggaatcaaagaatgatgacttagccacagcaattctgaaacagaag
aacaggcctaacagactgatagtcgacgagtctattaatgaagacaacagtgtggtgtct
ctctctcagaccaagatggatgagctgcagctcttccgtggtgacacagtgctgatgaag
ggcaaaaagaggcgtgagacggtgtgcatcgtactgtctgatgacacctgctcagacgaa
aaggttcgaatgaacagggtggtgcgcaacaacctgagggtccgactgggtgatgtcatc
agcattcagccatgtcctgatgtaaagtatggaaagaggatccacgtcctaccaatagat
gacacagtagagggaatcactggcaacttgtttgaggtttatctcaagccgtactttctc
gaggcttatagacccatccgcaaaggtgatattttcctggtcagaggaggcatgcgtgct
gtggaattcaaagtagtggaaaccgatccttctccctactgcatcgttgctccggacacc
gtcattcactgtgagggcgagccaatcaggagagaggatgaagaggagtctttgaatgag
gtcggctatgatgacattggtggcgtgaggaagcagctcgctcagatcaaagaaatggtg
gaacttcctctgaggcatcctgcacttttcaaggccataggtgtcaagcccccacgcgga
attcttctttatggacccccgggaactggaaagaccttgattgccagggctgtggccaat
gaaacgggggcctttttcttcctgatcaatggccctgagataatgagcaagctggctgga
gagagtgagagtaacttaaggaaagcctttgaggaagcagagaaaaatgctcctgccatc
atcttcatcgacgagctcgatgctattgctcctaagagagagaagactcacggtgaggtg
gagaggcgcattgtgtcgcagctgctgactctgatggatggcctcaaacagagagcccat
gtcatcgttatggccgccacaaacagacctaacagcatcgacccagctctcaggagattt
gggcgttttgaccgggaggtggacattggcatcccagatgccactggcagactagagatt
cttcagattcacaccaaaaacatgaagctggctgatgatgtggacttggaacaggtagcc
aatgagacccacggccacgtgggtgccgatctggctgccctgtgctccgaggcggccctg
caggccatcagaaagaagatggacctgatcgacttggaggatgagacaattgatgctgaa
gtcatgaattctcttgctgttaccatggatgacttcaagtgggctctgagccagagcaac
ccatcagctctcagagaaactgttgttgaggttcctaacattacttgggaggatattggt
ggactggaagatgtcaagagagagctgcaagagttggtgcagtacccagtggagcacccg
gacaaattcctcaagtttggcatgaccccgtccaagggtgtgctcttctacgggcctcct
ggttgtggtaaaactctgctggccaaagccatcgccaacgagtgccaagcgaatttcatc
tccatcaaaggccccgagttgctcaccatgtggtttggagagtctgaggcaaacgtcaga
gaaatttttgacaaggcacgtcaagcagccccctgcgttctcttctttgacgagttggac
tccatagcgaaggctcgtggcggcaacgtgggagacggcggcggcgcggctgaccgagtc
atcaaccagatcctgacagagatggacggaatgtccagcaagaagaacgtcttcatcatc
ggcgccaccaacagaccagacatcatcgaccccgccatcctgagacccggccgtttggat
cagctcatctacatccccctgccagacgagaagagccgaatgagcatcctcaaggccaac
ctgcgcaagagtcccatcagcaaggatgtgaacctggactacctggcgaagatgaccaat
ggcttctcaggagctgacctcacagagatctgccagcgagcgtgtaagctggccatcagg
gagagcatcgagaacgagatccgcagagagagggagaggcagaccaatcctttagccatg
gaggtggaagaggatgaccctgtgcctgaaatcaggaaggaccactttgaggaggccatg
cgattcgcccgccgctccgtcagcgacaacgacatccgcaaatacgagatgtttgcacag
acgctgcagcagagtcgtggcttcggcagcttcaggttccccaacagcaccacaggcggc
agcggcccaagccacggctcgggaggaagcggcaccggtcccgttttcaatgaagataac
gacgacgacctgtatggataa
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