Syngnathoides biaculeatus (alligator pipefish): 133499372
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Entry
133499372 CDS
T09681
Symbol
col8a2
Name
(RefSeq) collagen alpha-2(VIII) chain isoform X1
KO
K23455
collagen type VIII alpha
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
133499372
NCBI-ProteinID:
XP_061673312
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Position
1:complement(12742973..12814425)
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AA seq
691 aa
AA seq
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MPGMLSTMLLAPACVLLMLSGHVFAGGYAPMAHMKYMQPMMKGPVGPPFREGKGHYVDMP
PMVDVKGEPGPQGKPGPRGPPGPPGIPGKPGLGNPGLNGQPGPQGPPGFPGIGKPGLPGL
PGKIGPKGMAGLTGEIGPRGEPGLRGQPGQPGLPGPAGLSLNGKPGLPGIRGPPGSRGEP
GLKGLSGPPGERGVKGENGNGTPGPPGIRGPPGLKGSTGPPGLPGIGKPGPKGLPGLIGY
KGEQGLPGDRGEPGEAGLPGLQGQPGPVGIGKPGLDGSPGAPGLIGPKGEQGLRGSPGFP
GTPGYGKPGLGGPKGDKGQTGLTGLPGDKGDQGMAGPIGEPGLNGQPGPPGLHGPMGLPG
KHGMPGLKGELGPQGPPGLPGLRGDQGPSGITGKPGLPGDKGLPGLSGAIGKPGPKGEAG
HIGLPGNPGLTGLQGPKGEVGFMGTPGPRGQSGIPGLQGPMGPMGPQGAPGLKGESGLPG
LPGLGKLGEKGPIGPQGPPGKPGPAGLNGIPGPPGPPGPPGPPGNGQTVSAGPTGSELEG
GEVPGGRKGPAYSQVPLSASLAPAFTAILSKPFPPSGMPIVFDRTLYNGQNAYNPSTGIF
TAPLSGVYYFAYHVHVKGTSLWVALYKNNVPATYTYDEYKKGYMDQASGSAVLELKEGDQ
VWVQMPSDQANGLYSTEYIHSSFSGFLLCPT
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atgcctgggatgctgtccaccatgctgctggcccctgcctgtgtgctgctcatgctcagc
gggcatgttttcgctggaggctacgcccccatggcccacatgaaatacatgcaacccatg
atgaaagggcctgtcggaccgccgttcagagagggcaagggtcattatgtcgacatgcca
cccatggtagatgtgaagggggagccaggaccccaaggtaaacctggaccaaggggaccc
cctggtcctccaggaattccagggaaacctggacttggtaacccaggcctcaacgggcaa
ccaggtcctcaggggccccccggctttccaggaatcggtaaaccgggactcccaggactc
ccgggaaagattggacccaaggggatggcaggacttactggcgagattggccctcgtggt
gaaccgggtctcagaggtcaaccgggacagccaggactgccaggaccagctggcctatct
ctgaatggaaaacctgggcttccaggtattaggggcccgcctggttctcggggagaacca
ggattaaaaggcctttctggccctccgggtgagcgtggagttaagggtgagaatggaaat
gggacaccaggaccccctggtataaggggtccccctggtttgaaaggtagtacaggacca
cctggtcttccaggcattggcaaaccaggaccaaaaggtttgcctggactgattggttat
aaaggtgagcagggacttccaggggatcgaggtgaaccaggagaggctgggcttccaggt
ctacaaggtcaaccaggtcctgttgggatagggaagcctggacttgatggatcaccagga
gcaccaggtctcataggtccaaaaggtgaacaagggctcaggggttccccaggatttcct
ggtactccaggctatggtaaacctggtcttggtgggccaaaaggagataagggtcagact
gggttaactggcttacctggagacaaaggagaccaaggaatggcgggcccaatcggtgaa
ccgggtcttaatggacaaccaggaccccctggacttcacggccccatgggactcccggga
aaacatggcatgccggggctcaagggagaacttggaccccaaggacctccagggttgcct
ggcctcaggggtgaccaaggtcctagtggaatcacgggaaaacctggtttaccaggggac
aaaggcttacctgggctaagtggagcaattggaaaacctggaccaaaaggtgaagctgga
catatcggtctaccaggtaatcctgggctaacaggtcttcagggacctaaaggtgaggtg
ggctttatgggaacacctggtcccagaggtcagtcaggtatccctggtctgcagggtccc
atgggtcccatgggaccacaaggggcccccggcttgaagggcgaatccggccttccaggg
cttccaggactgggtaaattgggagagaaaggacccatcggtccccaaggtcctccgggg
aaaccaggccctgccggactcaacggtatccccggcccacccggccctccgggtcccccg
ggtcctccgggaaacggccaaacggtttccgcaggtccaaccggctcagaattggaagga
ggcgaagtgccaggaggccgcaagggcccggcgtacagtcaggtcccactctcggcctcg
ttagcaccggccttcacagccatcctctccaagcctttccctccctccggtatgccaatc
gttttcgacaggactctgtacaatggccaaaatgcctacaatccctccactggcatattc
actgctcccctctcgggcgtctactactttgcgtaccacgtgcatgtgaagggaactagc
ttgtgggtggccttgtacaagaacaatgtaccagcgacttacacctacgacgaatacaag
aaaggctacatggaccaggcgtccggcagcgctgtcctcgagctgaaagaaggcgaccag
gtctgggtccagatgccctcggatcaggccaacggtctctattccaccgagtacatccac
tcctcattctcagggttcctgctctgccccacataa
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