Syngnathoides biaculeatus (alligator pipefish): 133499395
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Entry
133499395 CDS
T09681
Symbol
dtx1
Name
(RefSeq) E3 ubiquitin-protein ligase DTX1 isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
133499395 (dtx1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sbia04121
]
133499395 (dtx1)
Enzymes [BR:
sbia01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133499395 (dtx1)
Ubiquitin system [BR:
sbia04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133499395 (dtx1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
WWE_5
zf-RING_UBOX
zf-rbx1
zf-C3HC4
zf-RING_2
zf-UDP
zf-RING_Vps41
zf-ANAPC11
PHD_NSD
zf_RING_Vps8
OST-HTH
Motif
Other DBs
NCBI-GeneID:
133499395
NCBI-ProteinID:
XP_061673357
LinkDB
All DBs
Position
4:2394153..2438778
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AA seq
631 aa
AA seq
DB search
MARPGPGLLPPANGLGYPPQNLARVVVWEWMNEHGRWRPYSAAVCHHIENILKGDARGTV
VLGQVDGQLSPYVIDLQSMHQFRQDTGTMRPVQRNFYEPSSAPGKGVVWEWENDNGSWTP
YDMEICVTIQNAYEKQHPWLDLTSLGFSYLIDFNGMSQTNKQTQRKRRLRRRMDLAYPLI
MGSIPKSQSWPVGASSGQPCSCQQCILVNSTRAASNAILASQRRKLHGGASGGTGAAGAP
TAVRQSNTFAGTSLWSPTSSATNNISAGGGQAKDEQVRAPLSPANFAAMPSHGHNALSIN
GQNNLNRPGTQRISMATPRGTIPPGVPALPVKNLTGSGPVHPALAGMTGILMCAVGLPVC
LTRAPKPILHPPHISKSDMKPVPGVNGMRRKTKKKHLRKGKTPEDVVRRYTDKIKVVPDE
DCTICMERLAMASGYEGVLQHKGIKPELVGKLGKCGHMYHLLCLVAMYNNGNKDGSLQCP
TCKTIYGEKTGTQPPGKMEYHIIPHCLPGYPDAKTIRIVYDIPAGVQTNEHPNPGKKFSA
RGFPRQCYLPDNEKGRKVLKLLITAWDRRLIFTIGTSSTTGESDTVVWNEIHHKTEFGSN
LTGHGYPDPNYLDNVLTELSAQGVGEDNLKD
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcccgggtccgggcctgctgccgccggcgaacggactgggctacccgccccaa
aatctggccagggtggtggtctgggagtggatgaacgagcacgggcgctggaggccctac
agtgcggcggtgtgccaccatattgagaacatcctcaagggggacgccaggggaaccgtc
gttctggggcaggtcgacggccagctgtctccttacgtcatcgatctgcagtccatgcat
cagtttcgacaggacacggggaccatgaggccagtgcagaggaacttctacgaaccgtcc
tccgctccggggaaaggcgtggtgtgggagtgggagaacgacaacggctcttggacgccg
tatgacatggaaatctgcgtgaccatccagaatgcgtacgagaagcagcacccgtggctg
gatctgacctctctgggcttctcttacctcatcgacttcaacggcatgtctcaaaccaac
aagcagacccagcgcaagcggcggcttcggcggcggatggatcttgcttacccgctcatc
atgggttccatccccaagtcgcagtcttggcccgtgggggccagctccggccaaccttgc
tcctgccagcaatgcatcttggtcaacagcacgagagccgcgtccaacgccatcctggca
tcccagcgacggaagctccacggaggggcgtccggcggtacgggtgccgcgggagccccg
acggccgtgcggcagagcaacacctttgccggaacttctctttggtctccgacctcgtcg
gccactaataacatcagcgcgggaggcgggcaggccaaagacgaacaggttcgggcgccg
ttgtccccagccaactttgccgcaatgccgtcccatggccacaatgccctttctatcaac
ggacagaacaacctgaaccgaccgggcactcagcgcatctctatggccacaccaagagga
accattccaccaggggttcctgctcttccagtcaaaaacctgaccggctctggacctgtg
catccagcgctagcaggtatgaccggtatcctgatgtgcgctgtaggtctgccagtgtgc
ctgacccgtgcgccgaagcccattctgcacccgccgcacatcagtaaaagcgatatgaag
cctgtgccgggagtcaacgggatgcgacgcaagaccaagaaaaagcacctgaggaaaggg
aaaaccccagaggatgttgtccgacgatacaccgacaaaattaaagtggtaccggatgag
gactgtaccatctgcatggagaggctggccatggcgtcaggctacgaaggcgtcctgcag
cacaaaggcatcaagccagagttggtgggcaaacttggcaagtgcggccatatgtaccat
ctgctgtgcctggtggccatgtacaacaatggcaataaggacggcagtctccagtgccca
acttgcaagaccatctacggggagaaaacgggcactcagcctcctgggaagatggaatat
cacatcatcccccactgcctgcccggctaccccgacgccaagaccattcgcatcgtctac
gacattcctgcaggtgtccagaccaatgagcaccccaaccctgggaagaagttcagcgcc
agaggattcccccggcaatgttacctgccagacaacgagaagggcaggaaggttctcaag
ctgctgatcacagcctgggaccggcgcctcatcttcacaatcggcacttccagtaccacg
ggcgagtccgacacggtcgtgtggaacgagatccaccacaagaccgaatttggctccaac
ttgactggccacggctaccctgaccccaactacttggacaacgtcctgacggagctgtcg
gcccagggagtcggcgaggacaacctgaaggactga
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