Syngnathoides biaculeatus (alligator pipefish): 133499458
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Entry
133499458 CDS
T09681
Symbol
ufd1l
Name
(RefSeq) ubiquitin recognition factor in ER-associated degradation protein 1
KO
K14016
ubiquitin fusion degradation protein 1
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
133499458 (ufd1l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sbia03009
]
133499458 (ufd1l)
Ribosome biogenesis [BR:
sbia03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
133499458 (ufd1l)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UFD1_N1
UFD1_N2
CDC48_2
Motif
Other DBs
NCBI-GeneID:
133499458
NCBI-ProteinID:
XP_061673489
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All DBs
Position
4:4503372..4512328
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AA seq
310 aa
AA seq
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MFSFHVFDHPMSRGFQNRFSTQYRCYSVSMLAGPNDRSDVEKGGKIIMPPSALDQLSRLN
ITYPMLFKLTNKNSDRMTHCGVLEFVADEGICYLPHWMMQNLLLEEGGLVQVESVNLMVA
TYSKFQPQSPDFLDITNPKAVLENALRNFACLTTGDVIAINYNEKIYELRVMETKPDRAV
SIIECDMNVDFDAPLGYKEPERRSHHQEEPTEEEADPSTYADMDTRFRAFTGSGNRLDGK
TKGIEPSPAPLGPSDIIRGIPNYEFKIGRITFIRNSRPLPRRMVEDDDAMNRFIAFSGEG
QSLRKKGRKP
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgttttccttccacgtcttcgaccacccgatgtctcgtggcttccagaaccggttttcc
acccagtaccgatgctactccgtgtcgatgctggccggtccgaatgaccgctccgacgtg
gagaaaggaggcaaaatcataatgccgccttcagcgctcgaccagctcagcagacttaat
atcacctatccgatgctgttcaagctgaccaacaagaactcggaccgaatgacacactgc
ggggttctggagttcgtggcagatgagggaatctgctacctgccgcactggatgatgcag
aatctgctcctggaggaaggcggtctggtccaggttgagagcgtcaacctcatggtggcc
acctactccaagttccagccgcagagtcctgactttttggacattacgaaccccaaagca
gtgctggagaatgcgttaaggaactttgcctgcttgacaaccggtgacgtcatagccatt
aactataatgaaaagatttatgaactgcgagtaatggagaccaaaccagacagagcggta
tccatcattgagtgtgacatgaatgtggattttgatgctccgctgggctacaaagagccc
gaacgtcggtctcaccatcaggaagaaccgaccgaggaggaggcagatccaagcacttac
gccgatatggacactcgattcagggcttttaccggctctggcaatcgcttggatggcaaa
accaaagggatcgagcccagtcctgctcctctgggccccagcgacattataagaggtatc
cccaactacgagttcaaaattggccgaatcacgtttatccgaaactcaaggccacttccg
aggagaatggttgaggatgatgacgctatgaacagattcatcgccttctccggagaagga
cagtcattacgcaagaagggcagaaagccgtga
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