Syngnathoides biaculeatus (alligator pipefish): 133499478
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Entry
133499478 CDS
T09681
Symbol
prdm8b
Name
(RefSeq) PR domain zinc finger protein 8b
KO
K20797
PR domain zinc finger protein 8 [EC:2.1.1.-]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbia03000
]
133499478 (prdm8b)
03036 Chromosome and associated proteins [BR:
sbia03036
]
133499478 (prdm8b)
Transcription factors [BR:
sbia03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
133499478 (prdm8b)
Chromosome and associated proteins [BR:
sbia03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
133499478 (prdm8b)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2_4
zf-C2H2
SET
Zf-C2H2_ZNF451_C
DUF1835
DUF5810
Motif
Other DBs
NCBI-GeneID:
133499478
NCBI-ProteinID:
XP_061673510
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Position
4:complement(34424131..34432306)
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AA seq
566 aa
AA seq
DB search
MEESSSQHKAQLWDGDAKAVQQCLTDIFTSVYTTCDVPESAIFGPCVLSHTSMYDSIAFI
ALKATDKRTAPYIFRVDTSAANSTSEGLMWLRLVQSARDKDEQNLEAYVKNGQLFYRSLR
RIEKDEELLVWYGKDLVELLLLTASRVPAKSKGSSHHSCPDCNQRFQFEFPFLAHLRFRC
TKRLQSLTGVDEEPSRERSPDRPNATPTRSSPKHGRSEGDGSKPSTDFHNLARDMENNRT
GSPLRDREAEVCSESSGKRKFSSVEDRECRRPGLPQSKSKEELATSAQNYRGVYGLEENH
RSLSSSSSSETKCSAFTEVKKSVQTLKNHGSSKSPSAANSENKDRPTNSPSEKHLNIRQV
LSETQPPQTPPMASAFTSVSQASGGGERKSAFSQPARSAYSQISPLVMPPKLLDCHPAVG
DTISSSRLYQADHLAAKLQGAELGANCTVPGGVAKQSPFVYAAAAAAATFWPKNSGGVQL
QMPSALTLLPPSFTSLCLPAQNWCAKCNASFRMTSDLVYHMRSHHKKEYAMEPLVKRRRE
EKLKCPICNESFRERHHLSRHMTSHN
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggaggagtccagctcgcagcacaaggcccagctgtgggacggcgatgccaaggcggtg
cagcagtgtctgaccgacatcttcaccagcgtgtacaccacctgcgatgtgcccgagagc
gccatcttcgggccgtgcgtgctcagccacacgtccatgtacgacagcatcgccttcatc
gccctcaaggccaccgacaagcgcaccgcaccctacatttttcgggtggacacgtccgcg
gccaacagcacgtcggagggcctgatgtggcttcgtctggtgcaatcggcccgtgacaag
gacgagcagaacctggaggcgtacgtgaagaacggccaactcttctaccgctcgcttcgg
cgcatcgagaaggacgaggagctgctggtgtggtacggcaaggacctggtggaactgctg
ctgctcactgcctccagggtgccagctaagagcaaaggttcgtcccaccactcatgcccg
gactgcaatcagaggttccagtttgagttcccgttcttggcgcacctccgtttccgctgc
accaaaagactgcagagcctgacgggggtggacgaggagcccagcagagagcgcagtcca
gaccggcccaacgcaacgcccaccaggagcagtcccaagcatggccgctccgagggcgat
ggcagcaaaccctccacagactttcacaaccttgctcgggacatggaaaacaaccggacc
ggcagcccgctgcgtgacagggaggcagaggtgtgcagcgagagctcaggaaagaggaag
ttctcctcagtggaagaccgggagtgccgacgacccggcctgccgcagtccaagtccaag
gaggagctggcgacgtcagcccagaactaccgaggagtgtacggtttggaggaaaaccac
cgctcactttcctcttccagttcctcagagaccaagtgcagcgccttcaccgaagtcaag
aagtcagttcaaactctcaagaaccatggcagcagcaaaagcccatcggctgccaattca
gagaataaagaccgtccaaccaacagcccctcggagaagcacctgaacatccgacaggtt
ctgtcagagacgcagccaccccaaaccccacccatggccagcgccttcacttcagtgagc
caggccagcggcggcggtgagcggaagagcgccttcagccaaccggcccgatctgcctac
tcccaaatctccccgttggtgatgccgcccaagctgctggactgccaccctgcggtgggt
gacaccatctcatccagccgcctctaccaggctgaccacctggccgccaagctgcaggga
gccgagctaggcgcaaactgcactgtgccgggcggcgttgccaagcagagcccctttgtg
tacgctgccgccgccgcagccgccaccttctggcccaagaattcaggcggcgtccagttg
cagatgccctctgcactcacactcctgccgccctccttcacgtccttgtgcctcccggcg
cagaactggtgcgcaaagtgcaacgcctcattccgcatgacttcggacctggtgtaccac
atgcgctcgcatcacaagaaggagtacgccatggagcccctggtcaagcggcggcgcgag
gagaagctcaaatgtcccatatgtaacgagtcctttcgagagcgccaccatctgtcacgt
catatgacctcacacaattga
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