Syngnathoides biaculeatus (alligator pipefish): 133499500
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Entry
133499500 CDS
T09681
Symbol
cspg4ba
Name
(RefSeq) chondroitin sulfate proteoglycan 4
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
sbia00535
]
133499500 (cspg4ba)
04091 Lectins [BR:
sbia04091
]
133499500 (cspg4ba)
Proteoglycans [BR:
sbia00535
]
Cell surface proteoglycans
Others
133499500 (cspg4ba)
Lectins [BR:
sbia04091
]
C-Type lectins
Others
133499500 (cspg4ba)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_2
Laminin_G_1
Cadherin_4
Laminin_G_3
TMEM154
New_glue
DUF3377
Motif
Other DBs
NCBI-GeneID:
133499500
NCBI-ProteinID:
XP_061673562
LinkDB
All DBs
Position
4:32046436..32079990
Genome browser
AA seq
2405 aa
AA seq
DB search
MFSFGKRAPEKLLWHVCGLLWWSLLLELASGVSFYGDGFVQLKARESSDHNKVRIRFRTS
STNGLLFLAAGQSVYFLLELNGGRLQLKLDLGSGEQLLQSERGTQLNDLAWHSVEVTHIK
RNVTLTVDKNFHTSVKIPGPHHVLTIFDGVYVGGSVGLDRLYLPREPIGYRGCMEDVIFN
EHNLLSSLRPYTGFKTVHEVSLGCSPQFFATEEDPISFFSSRAYISLPHWNGQQEAVFEC
AVHTSAREGILLYSSAKEGDFVALEIQEGLLVAIIRKGGSITELRSLSFINDRKWHAIKM
RLYSRTLELMVDGEMVKSNIVSRSKGLQFKGSVFIGGVDDSSRSEVRKVKLMSVSGKRMH
GGSFKGCMKNIEVNRVKMGLANAVVTKDISVGCEPEKEPVWSTTMSPTSAPESLFFLVTP
TPSLYTLTLARGLDRRYGTDFVQLKPLIVEEGGRASLEAKHIKVLLDFKTLGIRQSQILF
QIQDHPLHGQVRLDVDQDQPQNTFSMLDLWHERVMYIHGGSEDPDDFFMFSISSSSRKEV
PDYLRANTLYRFNITVTPTNDAPELSLPEGNLFVLLENSKKRLTPDVLRATDIDSNDNSL
VFTVLGNLNADAGYLEIEDNQGTAVTSFSLSDLQELRVYYVHTGVRNSRIVLRVSDGEKV
SNTVVLRVMAIALEYKIANNTGLNINQGETATISSQQLSVETNAVRQVVEIRYDVIEQPQ
YGELQRLHSSGEWRPAESFSQRLLEKGRLRYVSTCHEIQTSNVTDHFKSKVHVAARATTE
ILFPITVKWVRYNLVRNIMMTLDKVRKVTLDSEYLFAAAKGVIVSEEDLYFRVLTTPKRG
KLLLGTTVLMKNSTFSQKDITDSKVHYELVDRPHEDTHDRFKFHLLSKHAQSQNYDFQFS
IKADANSVFIRNAGLFLQEGESKLITRNELFAETLLTHDMHYTVISSPKHGKLARITHSN
SNSSYNNILTFSNQDLLGDRILYVHDDSETNQDEFTFIVSTTKGFKSFIANDEIGSKEGT
FKISIQLVNDQKPVRVIDKVFHVVREGQRLLTDEDLRYHDPDSDFDDSQLIYIRRGIPVG
DLVLANDTSHRLFEFRQKDLEEKKVMFIHKGASIGRFVLFVSDGKNFVSSLLDINAQDPF
LKVVNNTGLLVQKGQSVIFSTTNFAVRTNLDVRDDQQITFKLTDTPKHGRLYRNEIVVES
FTLSDLKNGFIYYQHDDSKHLSDHFNLTITAKDIHLAAKIHVKVYLESHQRPPIVQHHNN
LLVEEGKPVKIDETKLEVTHEDNMPSEIVFKVKAGPHHGFLRLFVEADGRYIGSKESPVK
TFTQKDVNGGNVQYVQVERNKFNDTFTLAATNGVTDVTDIKMSVDIVPRHIPLRVSNFTV
EEGGYKALTREILEVTNRHFAGINFLFNVTKPPHHGRIEHSRHPGVPLTSFTRRQVEHDF
IYYVHDSSESLADNFTVIANDTSLRKQSETRSVFVQVTAINDEPPVITANRVLRVWVSSV
TEIGLEDLRAQDLDTGPGELHFVVTPPSNGHLALKRAPMTAVLNFTQAHIDQGHLLFVHK
GAMSGGFNFQVNDGVNFTPRQIFSITARTLILHVVQNRPLKVFPGSSTAISNEELQVMTN
DVTGTSNRTITFSVIRHPKLGRLVRKQAENDPVDISTFTQDMVDQKEVVYIQTPIESVAW
EATDSLTFSVASPPSSLESQTFKIEISYENTRPGRNTVLLANTGAEVTEGESVIIDESKL
DATNLMSKLPRPQRSANEVWFQVTSLPQHGVIVVGERNLTKEKPNFSQFILNKYGITYKH
DSSETTHDSFAFSAWVNPKGKSAQRPSDGIDVIEESFNITIIAVNDQPPVLKTKAPSLTV
VQGDTIAVKSENLEVEDLDNPPDDILFSVISKPNNGYLALEGRLNESIGGFTQAQINNGS
VYFIHDGSPNSGVFYFSVTDGHHKPIYKLFNLDVTKIRISLVNHTGLTLEQGSTEVRLIG
DNLAARTSGRNATIHYQITRPPKFGKLLLDTREVSHFDEDDLQAGRLAYHMTNLSCAEDS
LEFTAFTSEANLSAQVLNITVTPLIHLGKGVRAPSGIGLKLSSATLDVSKLADICSCDPL
FEILSQPNYGKVVRTKTKKWQKSEAVQSFTFKDITQEKVTLEVNPNMTDVRELNDSLVFL
LKAENIQPAKGAFHFTIVPYDPAEVQSTQNPAETTSFPSQTTIQPPRNGNALPTRSTAVA
YTQQAGKNQQRFKGRHRWGKSNRTSHFITTLGKPTTGSDYFPFINTPVRVESYPQKSSNP
LLVILPLLALLLLVIIFVVLVVFLRHHRRRKQRTETPKEAPATALPSGQTQRSAAVPTVT
VTPLNPTSTASPALSHLLLRNQRLDNCNPVDSKILVSSWSSDSPSALSQMIQTATPSLQR
NQYWV
NT seq
7218 nt
NT seq
+upstream
nt +downstream
nt
atgttctcctttgggaaaagagcgccggagaagttgctatggcacgtttgtgggctgctc
tggtggtcgctcctgctcgagctagcgtccggagtgtccttttatggcgatggatttgta
cagctgaaggcaagagagtcgtccgaccataacaaagtccgcattcgtttccgaacttct
agtaccaacggcctgctgtttcttgccgccggccagagcgtctactttctgttagagctc
aacggcggtcgcctgcagctgaaactggacttgggatctggggagcaactattacaatct
gagagaggaacgcagctcaatgaccttgcctggcattcggtggaggtcacccacatcaag
cggaatgtcactctaacggtagacaagaacttccacacaagtgtaaagatccctgggccg
catcatgttctcaccatctttgatggtgtctatgtgggaggttcagttggccttgacaga
ctttacctccccagagaaccgattggctatcgaggttgcatggaggacgtcatattcaat
gaacataacttgctgtcatcgctgaggccatacactggtttcaagactgtccatgaggtg
tctctcggttgtagtccccaattttttgccaccgaagaggaccccattagcttctttagc
tcaagagcttacatttctcttccccactggaatggtcagcaagaagcggtgtttgagtgt
gctgtgcatacttcagccagagagggtatactcttgtacagttctgccaaagagggagac
tttgtggcattagaaattcaagaaggcttgcttgtggctatcattcggaaaggtggtagc
ataacagagcttcgttctctttcatttatcaatgacaggaaatggcatgctatcaaaatg
cgattatattctagaacacttgagttaatggttgatggagaaatggtaaaaagcaatatt
gtctctcgctcgaaagggctgcagtttaaaggctctgtctttattggaggtgtcgatgac
agctccagatcagaagtcagaaaggtgaaattgatgtctgtgtcaggaaaacggatgcac
ggaggctccttcaaaggatgtatgaagaatattgaagtgaacagagtgaagatgggactt
gccaatgcagttgttacaaaggatatctcagttggctgtgaacctgagaaagaaccagta
tggtcaacaactatgagtccaacaagtgccccggaatccctgtttttcttggtgacccca
acaccgtcattgtacacgttaacacttgcaagaggtttggacaggaggtacggcactgat
tttgtgcagttaaaacccctcatcgttgaagaaggtggtcgagcatctcttgaggccaaa
cacatcaaggtactcttggatttcaagacgcttggtatccgtcagtctcagatcttattt
caaattcaagatcacccacttcatggccaggtcaggcttgatgtggatcaagatcaacct
cagaacaccttcagcatgttggacctttggcatgagcgagtaatgtatatccatggaggc
tctgaagatccagatgacttcttcatgttttcaatatcttccagcagtcgtaaagaagtc
ccggattatctcagggcgaacacattataccgttttaacattacggtaacaccgaccaat
gatgcacctgaattaagtctccccgaaggaaatctttttgtcttgttggaaaactctaaa
aaacgcctcaccccggatgttttgagggccacagacatagacagcaatgataacagtctt
gtttttactgtgcttgggaacctgaatgcagatgcaggctatttggaaattgaggataac
caaggaacagcagtgacatcattttctctctcagacttgcaagaactgagagtgtattat
gttcacacaggggttagaaactcaaggattgtgcttcgagtcagtgatggggagaaggtg
agcaacacagttgtattaagagtgatggcaatagcgcttgagtataaaattgccaacaac
acaggtcttaatatcaatcaaggagagacggctacaattagttcacaacaattgtctgtg
gaaaccaacgcggtgagacaagttgttgagatccgttacgatgtaattgaacaaccacaa
tatggagaactccagagacttcactcaagtggtgaatggaggcccgctgagtcgttttct
caaaggcttctagaaaaaggacgtctaaggtatgtgagcacgtgccatgagatccagacg
tccaatgtcacagatcactttaaatctaaagtccacgtggccgcaagggcaactacagaa
atacttttcccgatcactgtgaaatgggtgaggtacaacttggtgaggaatataatgatg
accttggataaagttagaaaagtgacacttgactcagagtacctgtttgctgcagccaag
ggtgtgattgtctctgaagaggatctttattttagggttctgaccacaccaaagagagga
aaactgctgcttggcacgacagtcttgatgaagaactcaacctttagtcaaaaagatatc
acagattcaaaagtacactatgaactagttgaccggcctcatgaagacacacatgacaga
ttcaagtttcacttgctttccaaacatgctcagtcccaaaactacgattttcagttctca
atcaaagccgacgctaacagtgttttcatcaggaatgccgggctctttcttcaagaggga
gaaagtaagttgatcacaagaaatgaactgtttgcagaaactttgcttacgcatgatatg
cattacactgtaataagtagtcccaaacatgggaagcttgctcgtattactcactcaaat
tcaaattcaagctataacaacatcttaactttcagcaatcaagatctcttaggagaccgg
atcctgtatgtccacgatgacagtgaaacaaatcaggatgaattcactttcatcgtctct
accaccaaagggttcaaatctttcattgcaaatgatgaaattggatccaaagaaggaacg
ttcaaaatttccattcaacttgtaaatgatcaaaaaccagtacgtgtgattgataaagtt
ttccacgtagtaagagagggacaaaggctgctcacagatgaagatttgcgttatcatgat
ccagactcagattttgacgacagccagttgatttacattcgacgtggaatccccgtggga
gatttggtgctggccaatgacaccagtcatcgcctatttgagtttcggcaaaaggattta
gaagaaaagaaagtaatgttcattcataaaggcgcaagcatcggtagatttgtgctcttt
gtctctgatggcaaaaactttgtatcaagtcttttagatatcaatgcacaggaccctttc
ttgaaagttgtaaataatactggtttgctggtgcagaagggacagtccgttatcttttcc
acaaccaattttgctgtcaggaccaatttggatgtccgagatgaccagcaaatcacattc
aagttgactgacacgcctaagcacggaaggctttatcgaaacgaaatagtcgtagagtca
ttcacactgtccgacctcaagaacggattcatctattatcaacatgatgacagcaaacat
ctgtctgaccatttcaacctgacgataacagctaaagacatccaccttgcggcgaagatc
catgtaaaggtttacctggaaagtcatcagaggccacccattgtgcagcatcacaacaat
ctactggtagaggaaggaaaaccagtcaagatcgatgagactaaactcgaggtcacacat
gaggacaacatgccatccgagatcgtgttcaaagtcaaagctggcccccaccatggcttt
ctacgactttttgtggaagcagacgggcgctacatcggaagcaaggagtctcctgtcaag
acgtttacccaaaaggatgttaacggcggaaacgtccaatacgtgcaggtggagcgcaac
aaattcaatgacaccttcaccctggctgccacaaacggcgtcaccgacgtcactgacata
aagatgtcggtcgatatcgtaccccggcacatcccgctacgggtttccaatttcacagtg
gaggagggcggctacaaggccttgacaagggaaatacttgaagtcaccaaccgacacttt
gccggaatcaacttcctctttaatgtgacaaagcccccgcatcatggccgcatcgagcac
tcccgacatcccggtgtacccttgacatctttcaccaggaggcaggtggagcatgacttc
atctactacgtccacgacagcagcgaatcattagcggacaacttcacagtgattgcaaac
gacacgagcctaaggaagcagagtgagacccgcagtgtgttcgtccaagtgacagccatc
aacgacgagccccctgtgattaccgccaatcgggtcctcagggtttgggtgtcctcagtc
acagagatcggcctggaggacttaagggcacaggacctcgacacgggccctggagaactc
cactttgtggtgaccccacccagcaacggacatctggcccttaagcgtgcccccatgacc
gcagtactcaacttcacccaggcccacatagaccagggacacctgctgtttgtgcacaaa
ggcgccatgtctggagggttcaatttccaagtcaacgacggtgtgaactttactcccagg
cagatcttcagcatcactgcgagaacgctgatcctccatgtggtgcagaatcgccccctt
aaggtctttccagggtcctcaacagcaatttcgaacgaggaattgcaagtcatgaccaac
gacgtcaccggtacttctaaccgcacaattacattcagtgtgattcgacatcctaaactg
gggcgcctggtgaggaagcaggctgaaaatgatccagttgacatctctaccttcacgcaa
gatatggtggatcagaaagaggtcgtgtacatccaaacccccatagagtcggtggcctgg
gaggccacggactcactgaccttctccgtggcatcaccaccttcgtctctggagagtcag
accttcaagattgagatctcctatgagaatacaagacctggacgtaacacagtccttttg
gcaaacacgggtgctgaagtgacagaaggagaaagtgtgattattgacgaatccaagctg
gatgccactaacctgatgtctaagctgccgaggcctcagcggagcgccaatgaggtctgg
ttccaggtgacgtctttgccgcagcacggcgtcatcgtcgtcggcgaaagaaacctcacg
aaggagaaacccaacttctctcagttcatcctcaacaaatacgggattacgtacaagcat
gacagctctgagacaacgcacgattcgttcgctttcagcgcatgggtcaacccaaagggc
aagtctgcccaaaggccttcggatggcatcgacgttatcgaggagtctttcaacattacc
atcattgctgtgaatgatcagccccccgtgctgaagaccaaagcaccgagtctgaccgtg
gtacagggagatacaatagccgttaagtctgaaaacctcgaagtggaagacttggacaat
cctcctgatgatattttgttctctgtgattagcaagccaaacaacggttacctcgccctt
gagggaagattgaacgagtcgattggaggcttcacccaagcgcagattaataacggaagt
gtttatttcatccatgatggtagccctaactcaggggttttctacttcagcgtcacggat
ggccaccataagccaatttataagctattcaacttggatgtgacaaaaatcagaatctca
ctggtcaaccacacgggcctgacgctcgagcaaggcagcactgaagtccggctgattgga
gacaacctcgcggccaggaccagtggcaggaacgccaccattcactaccaaattacgagg
cctccaaagttcggcaaacttctgctggacacccgggaggtgtcacattttgatgaagat
gatctccaggctggacgtctagcgtaccacatgaccaatctttcatgtgcggaggacagc
ttggagttcacagcgttcacttccgaggccaatctgagcgcgcaagtgctcaacatcact
gtcactcctctgatccacctaggcaaaggtgtgagggctcccagcggaattggcttaaaa
ctcagctcggccacgctcgacgtttctaaactggcggatatttgcagttgtgacccgctg
tttgaaattttgtcgcagcccaattacggcaaagtggtccggacaaagactaaaaagtgg
cagaaatcggaagcggttcagtcattcactttcaaggatatcacacaagagaaagtaacc
ttggaggtgaatcccaacatgacagacgtccgagaattaaacgactcgctggtgttttta
ctgaaagctgagaacatccaacccgctaaaggagcgttccattttaccatcgtgccgtac
gatcctgccgaggtccagagcacacaaaatcccgcggaaacgacatcttttccctctcag
acaacaatccagcctccaagaaatggaaatgccttgccaacgcgttccacagctgtggca
tatacccagcaggcaggcaaaaaccagcaaaggttcaaaggacgtcaccgctgggggaag
tccaatagaacgagccacttcatcacgactcttggcaaacccaccacaggaagcgattat
ttccccttcataaacactcccgttcgtgtggaatcctacccgcaaaaaagctccaaccct
ctcctggtgatcttgccgctgctggctctgctgctcctcgtgatcatcttcgtggtactg
gttgttttcctccgacaccaccggcgccggaagcagaggaccgagacgccaaaggaggcc
ccagccactgcccttccaagtggccaaacccagaggagcgccgccgttcccacggtcaca
gtcaccccgctaaaccccaccagcacagctagtccggcgctcagtcacttgctgctacgg
aaccagcgactggacaactgtaaccccgttgattcaaagattctagtcagttcctggagt
agtgattctccctctgcgttgtcgcagatgatccagactgccactccctcccttcagcgg
aatcagtattgggtttga
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integrated database retrieval system
