Syngnathoides biaculeatus (alligator pipefish): 133499645
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Entry
133499645 CDS
T09681
Symbol
thbs4a
Name
(RefSeq) thrombospondin-4a isoform X1
KO
K04659
thrombospondin 2/3/4/5
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04145
Phagosome
sbia04510
Focal adhesion
sbia04512
ECM-receptor interaction
sbia04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133499645 (thbs4a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
133499645 (thbs4a)
09144 Cellular community - eukaryotes
04510 Focal adhesion
133499645 (thbs4a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
133499645 (thbs4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbia04131
]
133499645 (thbs4a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sbia04147
]
133499645 (thbs4a)
00536 Glycosaminoglycan binding proteins [BR:
sbia00536
]
133499645 (thbs4a)
Membrane trafficking [BR:
sbia04131
]
Endocytosis
Phagocytosis
Opsonins
133499645 (thbs4a)
Exosome [BR:
sbia04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
133499645 (thbs4a)
Exosomal proteins of colorectal cancer cells
133499645 (thbs4a)
Exosomal proteins of bladder cancer cells
133499645 (thbs4a)
Glycosaminoglycan binding proteins [BR:
sbia00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
133499645 (thbs4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
EGF_CA
EGF_3
COMP
EGF_MSP1_1
cEGF
Motif
Other DBs
NCBI-GeneID:
133499645
NCBI-ProteinID:
XP_061673872
LinkDB
All DBs
Position
4:complement(6112258..6131875)
Genome browser
AA seq
945 aa
AA seq
DB search
MAVWPGVLALSLVLQWFLIAAAAQGIVYDLLVSPDCLPDLLQGSLKNRGRDEAFLLSSFK
LQSKAPTSLYSIINPNDNSKYLDLNVQAKLSKVTLRYQKSDGRYATTSFNRGSLADGRDH
HILLHASGLQRGPPRLNIYVDCRLVHTLGDLPAAFGSIPRGPNSVALRTLQGGVTDMKLV
LDDTIDNVATLQECSLDQSEPLKVLSFQAATSVQEQTTMQELRSLLAEMKEMLNQQIKET
TFLRNTITECLPCDLGGSPTNPGPPPGPDSYEMPPSCPPGTCFRQDMCIPSPTGGYSCAP
CPDGYAGDGTYCDDIDECQFNPCFPGVRCENTSPGFRCGKCPLGYDGPEINGVGVSYAQS
NKQMCEDIDECLSPPDFGGCTANSHCHNTIGSFQCGDCKNGFTGDQASGCRGTRLCANGQ
PNLCDANAECVVQRDGSFGCACGVGWAGDGYKCGKDTDIDGYPDGPLDCQGNNCNKDNCA
FVPNSGQEDADRDGTGDACDEDADSDGIANVEDNCWLVHNVDQKNSDKDLHGDACDNCRR
VENPSQRDTDDDGLGDECDDDMDGDDLKNNEDNCPRVANSDQKDKDDDGVGDACDSCPEM
ANPNQSDSDDDLVGDTCDDNIDTDGDGHQDTKDNCPNVINSSQLDTDKDGMGDECDDDDD
NDGIKDDEDNCRLVVNLDQKDSDNDNVGDACQGDFDKDNVIDVVDHCPENAEVTLTDFRA
YQTVVLDPEGDSQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFSGVDFEGTFHVNTVTD
DDYAGFIFGYQDSSSFYVVMWKQTEQTYWQAAPFRAVAEPGIQLKAVKSKTGPGEYLRNS
LWHTGDTPEQVRLLWKDPRNVGWKDKVSYRWFLQHRPQVGYIRARFFEGSDLVADSSVIL
DTSMRGGRLGVFCFSQENIIWSNLKYRCNDTIPDDYDQFSAQNIS
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgtggcccggggtcttggctctgtctctggtgctgcagtggtttttgatcgcc
gcagcagctcaagggattgtgtacgaccttctggtgtcgccggactgcctgccggacctg
ctccaaggaagcttaaagaaccgagggcgggacgaggccttcctgctgtcctccttcaaa
cttcagagcaaggcccccacaagcctttacagcatcattaaccccaatgacaacagcaag
tacctggacctcaacgtgcaggccaagctgagcaaagtcactctgaggtaccagaagtcc
gacggcagatacgccacgaccagttttaaccgcggctccctggccgacggccgtgaccac
cacatattgctgcacgcaagcggtctgcagcgcggcccccctcgcctcaacatctacgtg
gactgcagactggttcacactctgggtgaccttccggccgccttcgggtccatcccacgc
ggtcccaactcagtggcacttcggacgctgcagggcggcgtgaccgacatgaaactggtc
ctcgacgacaccatagacaacgtggcgacgctgcaggagtgcagcctggatcagagtgaa
cctctgaaagtgctgagtttccaggcagccacgagcgtacaggagcagaccacaatgcag
gaattaaggagcctgctggccgagatgaaggagatgctcaatcagcagataaaagagacc
acctttctgaggaacaccatcacagagtgtcttccttgtgatctgggtggaagtcccacc
aacccaggaccacctccaggtccagactcgtacgaaatgcccccttcctgcccaccgggc
acgtgtttccgtcaggacatgtgcatcccctctccaacgggaggatacagctgtgctcca
tgtcctgacggatacgccggggacgggacttactgcgatgacatagacgagtgccaattc
aatccatgttttcccggcgtgaggtgcgagaacacttcgcccgggttccgatgtggcaaa
tgtcctttgggatacgacggaccagaaataaacggagtcggggtgtcctacgcgcaatca
aacaagcagatgtgcgaagacatcgacgagtgcctcagcccgcccgacttcggcggttgc
accgccaactcccattgccacaacactatcggctccttccaatgcggagactgcaaaaac
ggcttcacgggcgaccaggcgagcggctgccggggcaccaggctctgcgccaacggtcag
cccaacctgtgcgacgccaacgccgaatgtgttgtgcagagagacggcagctttggctgt
gcgtgtggtgttggttgggcaggcgatggctataagtgtggaaaggacacggatattgac
gggtatcccgacggtccacttgactgccaaggaaacaactgtaataaggacaactgcgcg
tttgttcccaattctggccaagaagatgccgacagagacggcacgggcgacgcctgcgat
gaggatgcggacagcgacggcatcgctaacgtcgaggacaactgttggctggttcacaac
gtggaccagaagaacagcgataaggatctccatggcgacgcctgcgacaactgcagaagg
gtggaaaatccgtcccagagagacacagacgacgacgggctgggagacgagtgcgacgac
gacatggacggggacgatttgaagaataacgaggacaattgcccacgggtggctaactcg
gaccagaaagacaaagacgacgacggcgtgggagatgcctgcgacagctgccctgaaatg
gccaaccccaaccagtccgactcggacgatgaccttgtaggagatacgtgcgacgacaac
atcgacaccgacggagacggccatcaggacacaaaagacaactgtcccaacgtcatcaac
tcctctcagctggacacagacaaggacggcatgggagacgaatgtgacgacgacgacgac
aacgacggcatcaaggacgacgaggacaactgcagattggtggtcaacctggaccaaaag
gactcggataacgacaacgtgggcgacgcgtgccaaggcgactttgacaaagacaacgtc
attgacgtcgtcgaccactgcccagaaaacgccgaggtcaccctgacggatttcagagcc
taccaaaccgtggtcctggatccggaaggtgactcgcagatcgatcccaactgggtggtt
ctcaaccaggggatggagatagtccagaccatgaactccgaccccggcctagctgtgggc
tacaccgccttcagcggcgtggacttcgagggaacgttccacgtcaacaccgtgactgac
gacgactacgccggcttcatcttcggctatcaggactcctcctccttctacgtggtcatg
tggaagcagacggagcagacctactggcaggccgcgcccttccgagctgtggccgagccg
ggaatacagctgaaggcggtcaagtccaaaacgggacccggtgagtacctgaggaactcc
ctgtggcacactggagatactccagagcaagttcgtctcctgtggaaggatcccaggaat
gtgggctggaaagacaaagtgtcctaccgctggttcctccagcacagacctcaagttgga
tacatcagggctcgcttcttcgagggctccgacctggtggcggactcgagtgtgatcctt
gacaccagcatgagaggaggaaggctgggggtcttctgcttctcccaggaaaacatcatc
tggtccaatctcaagtacagatgcaacgacaccattcctgatgactatgaccagttcagt
gctcaaaacatcagctga
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