Syngnathoides biaculeatus (alligator pipefish): 133499658
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Entry
133499658 CDS
T09681
Symbol
smarcad1a
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1A isoform X1
KO
K14439
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A containing DEAD/H box 1 [EC:5.6.2.-]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sbia03036
]
133499658 (smarcad1a)
Chromosome and associated proteins [BR:
sbia03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
133499658 (smarcad1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
CUE
HHH_3
Motif
Other DBs
NCBI-GeneID:
133499658
NCBI-ProteinID:
XP_061673898
LinkDB
All DBs
Position
4:8251005..8271338
Genome browser
AA seq
1094 aa
AA seq
DB search
MSQFNLERFRFKKSFTCRVQNASSESEKENKPAARQMESAKSRSAKSQARGVFFEDSEDD
NEPLKKISFSKKPREPVVQSSTNVTGDEKKKEINQKESKLAEMFPQLSMKKISEVVETTS
TLDGAVAACLLISEDDDKDRVRKTEHDESDSSLEIVEDSMNQLEVVGNLRQLDDTVDEYL
LISEEEDTDYARKRKPDDSDSSLCSGVALPYKRKKQSHSSEAEDEFIYNNQDDGGNEPSW
EKQEAMVRKLQKKFPNQDKEELRSVLQEHNWDDVEALHTLQIFTGTDETDSSSPNYKPKA
GHHSKSKDKSLNNQRKVHRRGSRDSKTDAKVNKHKDVSDTDKSSDATVESDDDSVEEVSN
HPTSTLSSWITKESFYSVKRTTSSYQKPSCSSSSSLSSAAKMLSSFASGTGVAKKRAEER
TRTARAAKERLSSDDEQDGDLSSELEDYDEALTKTEGVKEEILKFFQEATIDELALISGC
SVKKANKIIELRPFKNWLSLTSVFQKNNGLSEDLLLGCKSVLKERTIVRGLMSKCETISS
KMATQVREVMRSGTGAMQQPRLLNSQLQLKPYQLIGLKWLVLLHEHKLSGILADEMGLGK
TIQAIAFLAHLFQKGIKGPHLITVPSSTLDNWVRELKMWCPTLKVLVFCGSMEDRHYLKH
DILDGAVEFNVLVTTYTLATGKHSDRRLLRKLPLVYAIFDEGHMLKNMNSLRYRHLMSVN
AQHRLLLTGTPLQNNLLELMSLLNFIMPSMFSSSTTQLSKMFSKKSHEEQSQFQKDRISQ
AKRIMKPFILRRVKNEVLKQLPDKEEKVEYCSMSEKQQVLYQTLLKTIKDSTNSDRAELC
NVMMQLRKMANHPLLHRQYYTTEKLKAMSELMLKEPAHHDASAAFIQEDMSVLSDFELHC
LCQQYSSIRSYQLEKSLLLDSGKFRWLTERLASLKDKGDRVVLFSQFTMMLDIVEVLMKH
LKHRYIRLDGNTPMADRIGLIDEFNNDSDVFVFLLSTRAGGLGINLTSANVVILHDIDWN
PYNDKQAEDRCHRLGQTRTVQVIKLISKDSIEDGILQLGQKKLKLEQDMTTAEQSDEGAI
PEDMASLLKASLGL
NT seq
3285 nt
NT seq
+upstream
nt +downstream
nt
atgagccagttcaacttggaacgcttccgttttaaaaagtcgttcacgtgcagggtgcaa
aacgcaagttcggagtctgagaaagagaacaagccggcagcccggcaaatggaatccgcc
aaatctcgttcggcaaagtcccaggcccggggagtgttttttgaagactctgaggacgac
aacgagccactgaagaaaatctccttttcgaagaaacccagggaacctgtggtccaatcg
tctacaaatgtcacaggggatgaaaaaaaaaaggaaataaatcaaaaagagtccaaactc
gcagaaatgttccctcagctttcaatgaaaaagatctcagaggttgttgagactacaagc
acactggacggagctgttgccgcgtgtttgctgatttctgaggatgacgacaaagatcgt
gtcaggaagacagagcatgatgaatctgacagctcactggagattgtcgaggatagtatg
aaccaattagaggttgtagggaatttgagacaactggatgacactgttgatgaatatctg
ctgatttctgaagaagaagacactgattatgccagaaagagaaagccggatgactctgac
agctcactgtgcagcggcgtggcgctgccctacaaaaggaagaaacagtcgcattcgtct
gaagctgaagatgagttcatttataataatcaggatgatggaggaaacgaacccagttgg
gagaagcaggaggccatggtcagaaagctacagaaaaagtttcccaatcaagacaaggag
gagctgcgatcggtgcttcaggagcacaactgggatgacgtcgaggctctgcatactcta
caaatattcactggcacagatgagaccgattccagctcgcctaactacaaacctaaggca
ggccaccattccaagagcaaggacaagtctttaaataaccaacgcaaggttcaccggcgt
ggctctcgtgacagcaaaacggatgccaaggttaacaaacataaagatgtgagtgatact
gacaaaagttcagacgccacagtggagagtgatgatgattcagttgaagaagtgagcaac
catcccacctccaccctctcatcatggattacaaaagagtcgttctactctgtcaagaga
actacttcatcttaccaaaaaccatcctgctcctcctcctcctccttgtcgtccgccgca
aagatgctgtccagttttgcaagcgggaccggtgtggccaagaagcgagcggaagagaga
acgcgcacagcccgcgccgctaaagagcgcctgagctccgacgacgaacaggatggggac
ttgagcagtgagttggaagactacgatgaagccttgacaaaaacggaaggagtgaaggaa
gagatccttaagttctttcaggaggccaccattgatgagctggcactcatttctgggtgt
tctgtcaaaaaagctaataagatcatagagctgcgaccttttaaaaactggctgagcctg
accagtgtattccagaagaacaacggcctgtcggaagacctgctgctgggctgcaaaagt
gttctcaaggagcgcaccattgtacggggactcatgagcaaatgtgagaccatttcctcc
aagatggccacgcaagtcagggaagtcatgaggagtggcacgggagcaatgcaacagccc
aggctgcttaatagccagctccagttgaagccctatcagctaatcggtctgaaatggctg
gtgctcctccacgagcacaaactgagcggtatccttgctgatgagatgggtttgggcaaa
accatccaggcgattgccttcttggcccatttgttccagaagggaataaaaggtcctcac
ctcatcaccgtgccctcctctacactcgataactgggttagagagctgaaaatgtggtgt
cccactctgaaagtgctagttttttgtggatctatggaggaccgccactacctcaagcat
gacatcctcgatggcgccgttgaattcaatgtcctcgtcacaacgtacacccttgctact
ggaaaacacagcgaccggcgtctgttgcgcaagctccctcttgtgtacgccattttcgat
gagggtcacatgctgaagaacatgaactctctccgctaccgccacctcatgtcggtcaat
gcgcagcatcgtttactgctcactggcacgcctttacaaaacaacctcttagaactgatg
tcactgctcaacttcatcatgccatccatgttctcgagctccaccacgcagctctccaag
atgttttctaagaagtcccacgaggagcagagtcagtttcagaaagatcgcatctctcag
gccaaacgcattatgaaacctttcatccttcgaagagttaagaatgaggtcctcaagcag
ctgcctgacaaggaagagaaggtggagtactgctccatgagtgagaagcagcaggttctc
taccagacgctcctgaaaacaatcaaggattccaccaacagcgacagagccgagttgtgt
aatgtgatgatgcagttaagaaagatggccaaccaccctctgcttcatcgacagtactac
actacagagaagctcaaagccatgagcgaactcatgctaaaggagccagctcaccacgac
gcaagtgctgcattcatccaggaggacatgtcggtcctgtctgactttgagctgcattgt
ctgtgtcaacaatactcttccatccgttcctaccagctagagaagagtctactcctcgac
tctgggaagttccgttggctcaccgagaggctggcgtcactcaaagacaagggagacaga
gttgttctcttcagtcagttcactatgatgctggacatcgtggaggttctgatgaaacac
ctcaagcatcgttacattcgactggacggcaacacgccaatggcagacagaattgggctg
attgacgagttcaacaacgacagcgatgtgttcgtgttcctgctgtccacccgcgccggt
gggctgggcatcaacctgacttcggctaacgttgtcatcttgcacgacatcgactggaac
ccctacaacgacaagcaggccgaggaccgttgtcaccgcttgggtcagaccaggactgtg
caagtaatcaagctaataagtaaagacagcattgaggatgggatactgcagctgggccag
aagaaactcaaacttgagcaggacatgacaaccgctgagcagagtgacgaaggggccata
cctgaagatatggcgtctttgctcaaagcgtcgttggggctgtga
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