Syngnathoides biaculeatus (alligator pipefish): 133499664
Help
Entry
133499664 CDS
T09681
Symbol
lsm1
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
133499664 (lsm1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbia03019
]
133499664 (lsm1)
Messenger RNA biogenesis [BR:
sbia03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
133499664 (lsm1)
mRNA degradation factors
5'-3' decay
Lsm complex
133499664 (lsm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
133499664
NCBI-ProteinID:
XP_061673908
LinkDB
All DBs
Position
4:complement(2791336..2793679)
Genome browser
AA seq
133 aa
AA seq
DB search
MNYVPGTASLIDEIDKKHLVLLRDGRTLIGYLRSIDQFANLVFHQTVERIHVGKKFGDIP
RGIFIVRGENVVLLGEIDVDKPCETVLQQVSIEEILEEQRLKQQVKQETEKVKMQVLKDR
GLAIPKADNLDEY
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgaattatgtaccagggacggccagtctcatcgacgagatcgacaaaaaacatttggtt
ctcctccgggatggtagaacactaatcgggtacctcagaagcattgaccaattcgccaat
ttagttttccatcaaactgttgagcgtatccacgtgggcaagaaatttggtgacatcccc
agaggaatcttcatcgtgcggggagaaaatgtggtgctgcttggcgaaatagatgtggat
aaaccgtgcgagacggtcctgcagcaggtctccattgaggagattctggaggagcagcgt
ttgaagcagcaagtcaagcaggagacggagaaagtaaagatgcaggtcctgaaagaccga
ggcctcgccatccccaaagctgataacttggatgaatattaa
DBGET
integrated database retrieval system
