Syngnathoides biaculeatus (alligator pipefish): 133499683
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Entry
133499683 CDS
T09681
Name
(RefSeq) protein shortage in chiasmata 1 ortholog
KO
K28108
shortage in chiasmata 1
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sbia03036
]
133499683
Chromosome and associated proteins [BR:
sbia03036
]
Eukaryotic type
Meiosis-specific proteins
Others
133499683
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5587
Motif
Other DBs
NCBI-GeneID:
133499683
NCBI-ProteinID:
XP_061673938
LinkDB
All DBs
Position
4:25607077..25631508
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AA seq
1365 aa
AA seq
DB search
MFSLISFKALDYAFETRNRRKVLMDLLALPTPNIGDGVNLTEVTYTKPWVRGKALYTSLS
TSVMDDLRGTTQHINSTEKYLDPWSMKDTMEIVESCPSDSFERLHQSKQLKLSYPCEESF
FKLPEQIDPATKDKDLFLLEEIMAPDFLPQFRHHLPTLKSKVSRLKTLLVADPLINRSGD
FVTEETILSYCAPFEWLKDGRHKADITEEFTKEPLMANESLLLPEVLDDCKITADYPSSF
SSLCSCLNVVAEQLVEQLPDLEALNKDESASVDFSQLSSVSTTSKGNWMKDTHPSDWNTK
HSEWTTLPTDMELEVTLTPPTTATSHYHACQSICDLRKEELSLLDTLSLVSAGAQKQMEA
SLWMVEKYPNYVLRFLFAEPEVIEATIDFQPLSEALKLTTLKSVLPETDTRPLLGNMREL
PERLNTEAPSHEEAHMMEEFNLSPEPDGEYCLQSASPNLNECTIVADTVQKQTSAEFSHK
TLPLDTKEVKLSTSTNDRKANKVFFQVPSITSTEKMTGNIKSQKNDDKRGVVTAARSHLV
QHADPLTTFMMLRSQQASTAAPEEEQEKQRSPVVHPTPKQTGKADRKSTTPTITTVTLSI
SPAAVSGHAFRGQSTTATTAHDALSSRVVQVKAIDSQCQAYSELLSLACPRLSSAKELGL
NLPAWSDFKHLTPDQTRYVLKQREMAMCRRTLAEKGDEERLFHHVFVIHMLVTARELLFK
CHLSAAVEYLSKASETCFDTGLTQLLRRLHIILHLGRRNHECDVKLLELQKLVVARQHND
KILVITSLNCDNNMSTIMESLKQLIAVSVVRPDDDNSKLNGARVVSSIQDIGCVLVYGQH
LGPDFPWNLFSLVVEYDHAGPSPWATVCKERRVQHLTFDTVLPGGGQHKMEHEDTLADKV
GYVLLVTESLLNSTLLLQAMESMFNITLLVRSHCPSLQKLGVTNHYSVITVDETTAIVVQ
EQEELCEEKASEVIVMRLTALSLQYNNCWIILHCPDSKGGGFSGEAFSNLVVVYSSLVLF
GMKPEDLDVKVLIASDVLEVARWVSRICFLNLMSSDRNPVNYLEREWLAVTSSQEEHHLC
NFPCVNPLVAQLMLRRAPSLSWLLTASLTQLEEMLPEVPSKVLKLFSNTTSLYEAQPAQS
VPAHLSPAQSLPALPVLPQSGPVQVGQVYPLASSPPPPPPLPELTNPSSEPFPSFNPSFL
LAPESEDISFYSQEDATDFVYDDAWPAKSPDLSSRGLPSQWKDRNDQEVMLTGRRGRAGA
AGRVVERGSGKWSRQDLGSLDATFRSLNLPSQGPLWRGSPAFRGSHLRGRMSTNYGSRYW
MGQERKRSENVAGLTGTAVIPLKKSRLSYEKVPGQTDGQTRLKLF
NT seq
4098 nt
NT seq
+upstream
nt +downstream
nt
atgttctctttgatcagctttaaagctcttgactacgctttcgagaccagaaaccgtcgg
aaggtgttgatggacttgttggcgctacccacgcccaacataggtgacggtgttaatctg
acggaggtcacgtacacaaagccatgggtcagagggaaggcgctttacacctcgctcagc
acttctgtcatggacgatctcagaggaaccacacaacacatcaactcaacagaaaaatac
cttgacccttggagtatgaaggacacgatggagattgtagagagttgtccctccgactca
tttgagcgtcttcaccagagtaaacagttgaagctttcctatccatgtgaggaatccttt
ttcaagttacctgagcagattgatcctgcaactaaagacaaagatcttttcctgctggaa
gagatcatggctcccgatttcctcccacaatttagacaccatttgcccaccttgaagagc
aaagtgtcccggctgaagaccctgctggtggccgacccgctcattaaccggagcggagac
tttgtcaccgaggaaacaatactcagctactgtgcaccttttgagtggctcaaggatggg
cggcacaaagcagacatcactgaagagtttaccaaagagcccctgatggcaaacgagtcg
ttgctgttacctgaggttctggacgactgcaagataaccgccgactatcccagcagcttt
tcaagcctttgtagttgtttgaatgttgttgctgaacaactagttgagcaacttcctgac
ctggaggcgctgaataaagacgaatcagcatcagtggacttttcacaactttcatcagtg
tcgacgaccagcaaaggaaactggatgaaggacacacacccttctgattggaatacaaaa
cactcagaatggacgacgcttccgaccgacatggaactggaggtgactctgactccacct
accaccgccactagtcactatcacgcctgtcagagcatttgtgacctccggaaggaagaa
ctgtctttactggacacactatctttggtgtcagcaggagctcagaagcaaatggaagcg
tcgctttggatggtcgagaagtatccaaactatgtgctaaggttcttgtttgcagaacct
gaagtaatagaagccaccattgacttccagccgctgagcgaagccttgaagttgacaacc
ttgaaaagtgtgcttccagaaacggacactcggccgttgttgggcaacatgcgggagtta
cccgagaggctgaacactgaagctccttctcatgaggaggcccacatgatggaagaattt
aacctgtcaccggaacctgatggagagtactgcttacaaagtgcttcaccaaacctcaat
gagtgtacaattgtagcagacacggtccaaaagcaaaccagtgctgagttctcccataaa
acactccctcttgacacaaaggaagtcaaactttcaacaagcaccaatgacagaaaagca
aacaaggtctttttccaagtcccatccataacttctactgaaaagatgactggcaacatc
aaaagccagaaaaatgacgacaagagaggcgtcgtcacggcagccaggagtcatttggtc
cagcacgcagacccgctgaccaccttcatgatgctaaggtcgcagcaggcatccactgca
gcaccagaggaggaacaagaaaaacaaaggtctcccgtggtgcacccaactccaaagcag
acaggcaaagcggacaggaagtccaccacccccaccatcactacagtcaccctctccatc
tctcctgctgcagtgtcaggacacgcattcagagggcagagcaccaccgccaccactgcc
catgatgcacttagcagcagggtggttcaagttaaagccattgacagtcagtgtcaggcc
tacagtgagctgctgtccttggcttgccctcgtctgtcctctgccaaagagctgggcctc
aacctccccgcctggagcgactttaagcatttgaccccggatcagacgcgctatgtgctc
aaacagcgggagatggcgatgtgcaggaggacgctagcagagaaaggagatgaggagcga
ctgttccaccacgtttttgtgatccatatgctggttacagcaagggagctcctgttcaaa
tgtcacctgagtgctgctgtggagtacctgagcaaggcatcagagacatgcttcgacacg
ggtctgactcagctgctgagaaggctgcacatcatcttacatctcgggcgcaggaaccac
gagtgtgacgtaaaattgctggagctgcagaagctggtggtggcgcgtcagcacaacgac
aaaattcttgtaatcacatcgcttaattgtgacaacaacatgtccacaatcatggaaagc
ttgaaacaactgatagctgtaagtgtagttcgccccgatgacgacaacagcaaactgaac
ggtgccagagttgtcagcagtattcaagacattgggtgcgtgttggtgtacgggcagcat
ctgggcccggacttcccatggaatcttttctccctggtggtggagtacgaccatgccggc
ccatctccgtgggcaaccgtatgcaaagagaggagagtgcagcacctcacttttgacacc
gtcctccctggcggaggtcagcataagatggagcatgaggatactctggcggacaaggtg
gggtacgtgttgttggtaacggagtcgctcctcaactctacattgttgctgcaggccatg
gagtccatgtttaacataacactcctggtaaggagccactgtccatccttgcagaagctg
ggcgtcaccaatcactactctgttatcactgtggatgagaccactgccatagttgtacag
gagcaggaggagctttgtgaggagaaagccagcgaggtgattgtgatgaggctcaccgct
ctgtcactgcagtataacaactgttggatcatactgcactgccccgacagcaagggggga
gggttctctggtgaagcctttagcaacttggtggtggtctactcgtcactggtgctcttc
ggcatgaagccagaagacctggatgtcaaggtcttgattgcgtcggatgtgttggaagtg
gcccgttgggtcagccggatctgcttccttaacctgatgtccagtgatcggaatcccgtc
aattacctggagcgagaatggctggccgtcacgtcctcacaggaggagcaccacctgtgc
aactttccctgcgtcaaccccctggtggctcagctcatgctcaggagggccccctcttta
tcgtggctcctgactgcctcgctgacacagttggaggagatgttgcccgaggtaccaagc
aaggtgctgaagctctttagcaacactacttccctatatgaagctcagccagctcagtcg
gttccagctcatttgagtccagcccagtcacttccagccctgccagttcttccccagtcg
ggtccggtccaggtgggccaagtatatccgctcgcttcttctcctcctcctcctcctcct
ctacccgagctcaccaaccccagttcagaaccatttccaagcttcaaccctagcttcctg
ttggcccccgagagcgaggatataagcttctactctcaagaagacgccaccgattttgtc
tatgatgacgcatggcccgccaaaagcccggatcttagcagccggggcctacccagtcag
tggaaggacagaaatgaccaggaagtgatgttaactggtcgcaggggccgagcgggagca
gcggggagggtagttgaaaggggaagcggcaagtggtcacgacaagatttgggatccttg
gatgccaccttcaggtccctcaatctgccttcacaaggcccgctgtggagaggaagcccg
gcttttagaggttcacacctcagagggagaatgtccactaactatggatcaagatactgg
atgggacaagagaggaagaggagtgaaaatgtggccggcttaaccggaacagcggtgatt
cctctgaagaaaagcaggctgagctacgagaaagtgcccggacagacagacggacagacc
agactgaaactcttttag
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