Syngnathoides biaculeatus (alligator pipefish): 133499908
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Entry
133499908 CDS
T09681
Symbol
oclnb
Name
(RefSeq) occludin b isoform X1
KO
K06088
occludin
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03272
Virion - Hepatitis viruses
sbia04382
Cornified envelope formation
sbia04514
Cell adhesion molecule (CAM) interaction
sbia04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
133499908 (oclnb)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
133499908 (oclnb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
133499908 (oclnb)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
133499908 (oclnb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sbia01009
]
133499908 (oclnb)
Protein phosphatases and associated proteins [BR:
sbia01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
133499908 (oclnb)
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Gene cluster
GFIT
Motif
Pfam:
Occludin_ELL
MARVEL
WLS-like_TM
MAP65_ASE1
PycTM
Tetraspanin
Oxidored_q3
Motif
Other DBs
NCBI-GeneID:
133499908
NCBI-ProteinID:
XP_061674308
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All DBs
Position
4:13736380..13813773
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AA seq
523 aa
AA seq
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MVHIDRRRMGRSLGRSVSGGTPSLVHVKGHAKNHSFLSAFQVDFTMPGDKFSLPPYQPSG
SKHHSSRHRHNELISNPAFSSRPPDKMLHFYRWSSPPGVMKILCILIIIMCVAVFACVAS
TLAWDYDMNAIGLGGSTGLVPGFGSYGSGSFGGPYGGSYSGSFGGSYGGGLGGSYSGYGG
TTQMDPRAGKGFIIAIAAITFIAVLITFVLVVSRQNASHSSKFYLATIIICAILAFLMLI
ATIVYLVAVNPTAQSSGSIYYNQVRQLCAQYQNQNQAQGIFLNQYLYHYCVVEPQEVIAI
ILGFLVFIALTILLVFAVKTRTSIRRWGRDRILWEEVKFVSDGTHHSVGEWVKNVSGNPE
TLVNDYNKQVGASRAYMDQMDLNKPIYMPGNSVISSSLDALKAGLKDYDTGPDSGDDLEE
KNFSKLYPSVVDEDERLIYRQEFEQDYREYKKLQLELDNINQSLAHLDRELAIHPDGSPQ
FLDAIEDYTKVKNLKNMKKKRCKYLRSKLSHIKRMISDYDLRP
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggtccatattgaccgaagaaggatgggaagaagtcttggacgtagcgttagcggagga
actccgagccttgttcacgtcaaggggcacgccaaaaatcattccttcttgagtgcattt
caagtggacttcactatgccaggggataaattcagccttccaccataccagccaagcggc
agcaaacaccacagcagcagacacaggcacaatgagctcatttccaatccagcattttcc
tcccgcccaccggacaagatgcttcacttttatcgctggagttcaccaccgggtgtgatg
aagatactttgtatcttgatcatcatcatgtgtgtggctgtgtttgcctgtgtggcctca
acactcgcctgggactatgatatgaatgccattggtctgggtggtagcaccggcttggtg
ccaggttttggatcttacggcagtgggtcatttggtggcccatatggtggctcatacagt
ggcagttttggtggctcttatggaggaggccttggcggttcctatagtggctatggagga
acaacacaaatggatcctagagcgggaaaaggcttcattattgccattgccgccattacc
ttcatagctgtgctaatcacttttgttttggttgtgtcaagacaaaatgcttctcactcg
tcaaagttctacctagcaacaatcatcatctgtgccattttggcatttttgatgctcatc
gccaccatcgtgtaccttgtggccgtaaacccaaccgcccagtcctctgggtctatttac
tacaatcaggttagacagctgtgtgctcagtatcaaaaccagaaccaagcccagggtatc
ttcctcaaccaatacttgtaccattattgtgtggtggaaccccaagaggtgatagcaatc
atcttgggctttctggtgtttatagcccttaccattcttttggtgtttgctgttaagaca
cgcaccagcattcggcgctggggcagagatcgtatactatgggaggaggttaagtttgtc
agtgatggtacacatcacagcgttggagagtgggtgaaaaatgtgtcaggcaacccagaa
acattggtgaatgactataacaaacaagttggggcatcacgggcctatatggaccaaatg
gacctaaacaaacctatatacatgccagggaattctgttatttccagctccttggatgcc
ctaaaagctggactaaaagattatgacactggtccagattcaggggatgatcttgaagag
aagaacttcagcaaattatatccttctgttgtggatgaagatgagcgtttaatttacaga
caagagtttgagcaggattaccgtgagtacaagaaactacaacttgagctggacaacata
aaccagagccttgctcatctagatcgagaactggctatacatcccgatggcagtccacag
tttctggatgccatagaagactacaccaaagtgaagaatttgaagaatatgaagaagaag
cggtgcaaatatctcagatctaagctgtcccacatcaaaaggatgatcagtgactatgac
cttcgaccttga
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