Syngnathoides biaculeatus (alligator pipefish): 133499952
Help
Entry
133499952 CDS
T09681
Symbol
arid1ab
Name
(RefSeq) AT-rich interactive domain-containing protein 1A isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
133499952 (arid1ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbia03000
]
133499952 (arid1ab)
03021 Transcription machinery [BR:
sbia03021
]
133499952 (arid1ab)
03036 Chromosome and associated proteins [BR:
sbia03036
]
133499952 (arid1ab)
Transcription factors [BR:
sbia03000
]
Eukaryotic type
Helix-turn-helix
ARID
133499952 (arid1ab)
Transcription machinery [BR:
sbia03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
133499952 (arid1ab)
Chromosome and associated proteins [BR:
sbia03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
133499952 (arid1ab)
BRITE hierarchy
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
133499952
NCBI-ProteinID:
XP_061674407
LinkDB
All DBs
Position
1:complement(13629565..13672884)
Genome browser
AA seq
2239 aa
AA seq
DB search
MAAQVASVASLNASPPSELKKPDRDSQEESAPGEKQQQHENKEAGPDGGSPGRKELQDGG
DAAGGGGDPDMKNGNGNLPRVNNNSGNQNDSGGPEGNNHPGVGHHHSGPFPPPPYGFNQH
YSRAPFHQHGGQQSPGMAAASGPGMMDPYPANSHEHGYPNHYNNYSQFPSRTSYQGQGYG
AMSSPRNSQPPAAGGQPGKQQQPAAAAAGGGMAAAASYNNQRYNMGSQQPTSTPTLNQLL
TSPSLARSYPNYPQGDYNNQEGGTKSSSSAAADMVSGYSGVHPGWQQRAHHPPPMSPGNT
AQAPSRNQPASPMDQVGKMRGQPYGGPNPYSQQQQQQQQQQQQGPPTGPGPQQASSYPGQ
GYGPPGPQRYPMGMQGRTPGTMGTMQYAQQMSAYGQQGPGGYGQQGQGYYGQHGGPPHPS
QQQTPYPGQQQGSSGAPFPQQGHPSQPPGQHGQPGPPYSQSQGPHGPSAGQAPYVSPQQQ
SSQQQQQGPGPQNPQGSQGQPGYPQASAPGQPTQQQTPPQQQQGAPPPPPTQQQPQQQPG
SQPPQSQQPPSHGQQSQASPYSQTPPLPQQQPLQQQQSPYQRFPPPPQELSQDSFSSQSS
APPSNQPMPSNKSSQEDSMQGRPSSLPDLSGSIDDLPTGTEGALSPGVSTSGVSSSQGEQ
SNPAQSPFSPHTSPHLPGIRGPSPSPVGSPASVTPSRTGPLSPAAVPGNQMPPRPPSVQS
DSIMHSSMNQSAMGQDRVYMRNPQMPPYGSPGQPGSALSPRQSSGGQMHSGMGPYPQNNS
MGNYGPQGGQYGPQGYPRPPGYSGMPNANYPSGPGMGGSMNPMPGQGSGAPYGNMPPGGR
VVPGQMGARPYGPGMASNMGNMPPQVVSGMCPPPGMNRKDGGPSMHHGPANSIHNRPPGY
PMSQGMMGSASPYGPAMNSMHSMMNQGGPGPYPMGANMGNNTPGMAPSSEFGMDKINQAQ
KMNNKVDGTPKPESKKKSSSSTITNEKITRLYELGPEPERKLWVDRYLAFTEEKAMGMNN
LPAVGRKPLDLFRLYVSVKEIGGLTQVNKNKKWRELATNLNVGTSSSAASSLKKQYIQCL
YAFECKIERGEEPPPDFFNTDTKKSQPKIQPPSPAGSGSLQGPQTPQSTSSSMAEGGELK
PPTPASTPHTQMPPMPGARSSVNLQDPFADSSDPAFSRRNAMTPNSQNYQPGMGGPEMMG
RMGPYESNKDPFGGMRKAGEQFMPPGPNSGMGEQYNRGPPGPMGNLPMGQRQQYPYGYDR
RQESSMGPDGSMGPGAAQPNLMPSGADAGMYSPSRPPPQQRHDSYANQYSGQGAPPGGPY
PNQQPGMYPQQQPNYKRPVDGGYGPPAKRHEGEMYNVPYSGQQPPGPQSSGPQGQQDMYN
QYNAYPGGERRPPGPQNQFPFPFGRDRGPSSGGPNSQSPMPPQMMASPMPSGPDGPQGPI
WQGRNEMGYPNYHNRQGPPVPGQAPVYHGMNRSEEMMPSDQRMNHDGGPWPGHVNQRQPP
FGPGGSGPPMTRPLPSTYQASQNHIAQVSSPAPVPRPMESRTSPSKSPYMHPGIKVQKAG
PPVPASHIGQSPVQQPMMRRDAGFPPGSVECSQPHLKPRRRLTMKDIGTPEAWRVMMSLK
SGLLAESTWALDTINILLYDDNSITTFNLCQLPGFLELVVEYFRRCLIEIFGILKEYEVG
DPGQRTLLDPDAAEDSDDDVPMPEGELVGTDEEDDDEDEEAADAGVRVKEEEEEERSQKD
GGEEKPRVKEPATSGSSQDPVAEKPKQASKFDKLPIKVVRKKNPFQGSHASKLGQRQSFD
SGLVHWSVGGGDITEHIQTHFESRVSRLKTRKRPPKETRAGPDVPRSAVPQLPTAAGAPV
TATIDDVLSARPGSVTEEAVRGGAEEQKENGKYLFSINPELQSRRNVKILEDEPHSKDET
PLSTLADWQDSLARRCVCVSNIVRSLSFVPGNDQEMSKHPGLLLLLGRLVLLHHRHPERK
QAPVTYEKEDEEDEGVSCERDEWWWDCLEVLRENCLVTLANISGQLDLSVYSESICLPLL
DGLLHWAVCPSAEALDPFPTLGPHGSLSPQRLVLETLSKLSIQDNNVDLILATPPFSRLE
KLYGALVRLVGERKAAVCREMAVVLLANLAHGDGLAARAIAVQKGSVGNLLGFLEDSLAA
TQYQQSQSTLLQMQAHFEPTSVDMMRRAARALHALARLEENHSEFTLYESRLLDVSVSPL
MNSSVSQVICDVLFLVGQS
NT seq
6720 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcaggtcgccagcgtcgcctctctcaacgcgagcccgccgtccgaactcaaa
aaaccggatcgggactcgcaggaggagtcggcgccgggggagaagcagcaacagcatgag
aacaaggaagcggggcctgacggtggatctcccggccgaaaggaactgcaggacggcggc
gacgctgctgggggaggaggggatcctgacatgaagaacggcaacgggaatttgcccagg
gtaaataataatagcggtaatcagaacgattccggcgggcccgaagggaataaccatccc
ggcgtgggacaccaccactcgggccccttcccaccacctccttacggcttcaaccagcac
tacagccgggccccttttcatcaacatggcggacaacaaagccctggcatggcagcagcg
tcggggccgggcatgatggacccttaccccgccaattcccacgaacatggctaccccaac
cactataacaactacagccagttcccgagcaggacttcctatcagggtcagggctacggg
gccatgagttccccgcggaacagccagcccccggcggctggggggcagccaggcaagcag
cagcagccagcggcggcggcggcaggaggaggaatggccgccgccgcctcctataacaac
cagaggtataatatgggaagccagcaacccacgtcgacgccgactttaaaccagctgctc
acgtcccccagcttggccaggagctaccccaactacccgcagggagactacaacaaccag
gaagggggcaccaagtcgtcgtcgtcggcggcggcggacatggtgagtggctacagcggg
gtccatccgggttggcaacaacgggcccaccacccgcctcccatgagcccggggaacacc
gcacaagcccccagtcggaaccagcctgcaagcccaatggatcaggtggggaagatgcgt
ggccaaccatatggaggacccaatccttattcccaacaacaacaacagcagcagcagcag
cagcagcaagggcctcccacaggacccggaccccagcaagccagctcctatccagggcag
ggctacggacctccgggcccccaaagatatccgatggggatgcagggtcgaacaccaggc
accatgggcaccatgcagtacgcgcaacagatgtccgcgtatggacaacaggggccagga
ggctacgggcagcaaggccaaggctactatggtcaacacggcggccctcctcacccatcc
caacaacagacaccttaccccggccaacagcaggggagctccggagcgcccttcccccag
caggggcacccttcgcagccgcccggccaacacgggcaacccgggcccccttactcccaa
tcccaaggtccccacggcccttccgccggacaggcgccctatgtatccccccagcaacag
tcgagccaacagcagcagcaaggtcctggtcctcagaacccgcaaggctcccaagggcag
cctggctaccctcaggcctctgcgccaggtcagcctacacagcagcaaacacccccgcag
cagcaacaaggggcaccaccgccaccaccaacacagcaacagccacagcagcaaccagga
agtcaaccgcctcaatcccaacaacctccgagtcatggccagcagagtcaggcgtcgcca
tattcgcagacacccccgctgccgcagcaacaaccactacagcagcagcagtcgccatat
cagaggttcccgccccctccccaggaactctcccaagattcatttagctcccagtccagt
gcgcctccttccaaccagcccatgccttccaacaagagcagtcaagaagacagcatgcag
ggtcggccgtccagtttgccggatctatcaggctccatcgatgaccttcccacaggcacg
gagggcgccctgagcccgggcgtcagcacctcgggggtgtccagcagccagggggagcag
agcaaccccgcccagtcgcctttctcgccgcacacgtcaccccacctaccgggcatccgc
gggccctcgccgtcacccgtgggctcacccgccagcgtcacgccctctcgcacgggcccg
ctgtcccccgccgctgtgccaggtaatcagatgcctccccggccgcccagcgtccagtcc
gacagcatcatgcactcttccatgaaccagtcggccatgggccaagatagggtgtacatg
cgtaacccacagatgcctccctacgggtccccgggacaacctggctctgccttatctcca
cgccagtcctctggagggcagatgcatagcggaatgggaccctatccccagaacaactcc
atgggaaattacggccctcaggggggtcagtacggccctcaaggttatcccaggccaccc
ggctactcagggatgcccaatgccaactaccctagcggccccggcatgggcggttccatg
aatcccatgcccggccagggcagcggggcaccctacggaaacatgccccccggcggcaga
gtagtcccgggccagatgggcgccaggccctacggtcccgggatggcctccaatatgggc
aacatgcctcctcaggtggtctccggaatgtgcccgcctccgggaatgaacaggaaagac
ggcgggccttccatgcatcacggacccgccaactccatacacaacaggccacccggctac
cccatgtcgcaaggcatgatgggttcggcttctccgtacggcccggccatgaacagcatg
cacagtatgatgaaccagggaggtcccggtccgtatcccatgggggcaaacatgggcaac
aacacccccggaatggctcctagttcagagttcggcatggacaaaatcaaccaggcccag
aagatgaacaacaaagtggatgggactccgaagcctgaatccaaaaagaagtcgagttct
tctaccatcaccaacgagaagatcactcgcctgtacgaactcggcccagagcccgagagg
aagttgtgggtggaccgctacctggctttcaccgaggagaaagccatgggcatgaataac
ctccccgccgtgggacgcaagcctctggacctgttcagactctacgtgtccgtcaaggag
atcggaggcctgacgcaggtcaacaagaacaagaaatggcgagagctcgccaccaacctt
aacgtgggcacgtcgagcagcgcggccagttccctcaagaagcagtacatccagtgtttg
tacgccttcgagtgcaagattgagcgcggcgaggagccgcccccagatttcttcaatacg
gacaccaaaaagagccaaccgaagatccagccacccagtcccgctggttctggatcgctc
cagggcccccagactcctcagtccaccagtagttccatggcggaggggggagagttgaag
cctcccaccccggcctccacccctcacacccaaatgcctccgatgcccggtgccaggagt
agcgtcaacctgcaggacccctttgccgattccagcgacccggcattttccagaaggaac
gccatgacccccaactctcagaactaccaacccggaatgggcggccccgagatgatgggt
cggatgggtccctacgagtccaacaaggacccttttggtggcatgaggaaagctggagaa
cagttcatgccacccggtccgaatagcgggatgggagagcagtacaacagaggcccacca
ggacccatgggaaatctgccaatggggcagaggcaacaatatccttatggctatgaccgc
aggcaagagtcaagcatgggtcccgacggcagcatgggacccggagcggctcagcccaac
ctgatgccttccggagccgacgcggggatgtactcgcccagccgaccgccgcctcagcaa
cgacatgactcctatgccaatcagtattctggccaaggagcgccccctggcggtccgtat
ccaaaccagcaaccaggaatgtatccacagcaacaaccgaactacaagcgtcccgtggac
ggtggctacggcccccccgccaagcgccacgagggggaaatgtacaacgtcccttacagc
ggtcagcagcccccgggacctcaatcttccgggcctcaaggccagcaggacatgtataat
caatacaacgcctaccccggaggggagcggaggcccccgggtccgcagaaccagttcccc
tttcccttcggccgggaccgcggaccgtcgtccggcgggcccaattcccagtcgccgatg
cccccgcagatgatggcgagccccatgccctcgggtcccgacggcccccaaggccccatt
tggcaaggccgcaacgaaatgggctaccccaactatcacaaccgccaggggccccccgtg
cccggccaggcccccgtctatcacggcatgaaccggtcagaggagatgatgccgtcggat
cagcgcatgaaccacgacggcggcccctggcccggccacgtcaaccagaggcaacctccc
ttcggccccggcggttccggcccccccatgacgagacccctgccgtcgacttatcaggcg
tcgcagaaccacattgctcaggtgtccagtccggcgcccgtgccccggcccatggagagc
aggacgtcgcccagcaagtccccctacatgcacccgggcatcaaggtgcagaaagccgga
ccgccggtgcccgcctcccacattgggcagtcccccgtgcagcagccaatgatgcggcgg
gacgcgggctttccccccggttccgtggaatgctcacaaccgcacctcaagccacggaga
cggctaaccatgaaggacatcggcacacctgaagcgtggcgtgtgatgatgtcactgaag
tcagggttgttagcggagagcacctgggccttggacaccatcaacatcctactctatgac
gacaacagcatcaccactttcaacttgtgccagctgcctggattcctggaactggtggtg
gagtacttcaggcggtgcctgatcgagatcttcggcatcctgaaggagtacgaagtgggc
gatcccggccagcgcaccctcctcgaccccgacgccgccgaggactcggacgacgacgtg
ccgatgcccgagggggagctcgtcggcacggacgaagaggacgacgacgaggacgaggag
gcggccgacgccggggtgcgggtgaaggaggaggaagaggaggagaggtcccaaaaagac
gggggcgaggaaaagccaagggtcaaggaacctgctacctcagggtcttcccaggacccc
gttgcggagaagcccaagcaggcgagcaagtttgacaaactccccatcaaggtggtacgc
aagaagaaccccttccagggcagccacgcgtccaaactgggccagcggcagagcttcgac
agcggcctggtccactggagcgtgggcggcggcgatatcaccgagcacatccagacccac
ttcgagagccgcgtcagccgcctcaagacccgcaagcgcccgcccaaggagaccagagcg
gggcccgacgtcccgcgctcggcggtcccgcagctcccgacggcggcgggcgccccggtg
accgccaccatcgacgacgtcctgtcggcgcggccgggctccgtcacggaggaggcggtg
cggggcggcgccgaggagcaaaaggagaacggcaagtacctgttcagcatcaaccccgag
ctgcagagccggcgcaacgtgaagattctggaggacgagccgcacagcaaggacgagacg
ccgctcagcacgctggccgactggcaggactcgctggcgcggcgctgcgtctgcgtgtcc
aacatcgtgcgcagcctctccttcgtgccgggcaacgaccaggagatgtccaagcacccg
ggcctgcttctgctcctgggccgcctggtcctgctgcaccaccggcaccccgagcgcaag
caggcgcccgtcacctacgagaaggaggacgaggaggacgagggcgtgagctgcgagcgc
gacgagtggtggtgggactgcctggaggttctgcgggagaactgcctggtgactttggcc
aacatctcgggccagctggacctgtccgtgtactctgagagcatttgcctgccgcttctg
gacgggctgctccactgggccgtgtgtccctcggccgaggccctggaccccttccccacg
ctgggcccgcacggctctctgtcgccgcagagactggtcctggagaccctgagcaagctg
agcatccaggacaacaacgtggacctgatcctggccacgccgcccttcagccggctggag
aagctgtatggcgccctggtgcggctggtgggcgagcgcaaggcggccgtgtgccgcgag
atggccgtggtgctgctggccaacctggcgcacggcgacggcctggcggcgcgcgccatc
gccgtgcagaagggcagcgtgggcaacctgctgggcttcctggaggacagcctggccgcc
acgcagtaccagcagagccagagcacgctgctccagatgcaggcgcacttcgagcccacc
agcgtggacatgatgcgcagggcggcgcgggccctccacgccctggcccggctggaggag
aaccactcggagttcacgctgtacgagtcgcggctgctggacgtgtccgtgtcgccgctc
atgaactccagcgtgtcgcaggtcatctgcgacgtactcttcctcgtgggccagtcgtga
DBGET
integrated database retrieval system
