Syngnathoides biaculeatus (alligator pipefish): 133499960
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Entry
133499960 CDS
T09681
Symbol
tfip11
Name
(RefSeq) tuftelin-interacting protein 11
KO
K13103
tuftelin-interacting protein 11
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sbia03041
]
133499960 (tfip11)
Spliceosome [BR:
sbia03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
133499960 (tfip11)
Other components
Complex C specific factors
133499960 (tfip11)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
Motif
Other DBs
NCBI-GeneID:
133499960
NCBI-ProteinID:
XP_061674422
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All DBs
Position
4:5734591..5740776
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AA seq
832 aa
AA seq
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MSMSHLYGRREAEEEGVEIENFEITDWDLANEFNPDRRRHRQTKEQMTYGIWAEGDSDDE
RPSFGGKRSKDYTAPVNFVSAGLRKNASDEKQQREEEDDSDNSDDDTPSTPLPPRVSILK
KPQKGNLRGNQSQRFAGGIQAGQGIGSWEKHTKGIGQKLLQKMGYQPGRGLGKNAQGIIN
PIEAKVRKGKGAVGAYGNERTQQSIQDFPVVDSEEEEEKEFQKELGQWRKDPAATGAKKK
PKYSYKTVEELKAKGKLAGRSTGVSAGELAQVKVIDMTGREQKVYSSYSQMSNKHSMPEE
GPPSMSARDQKGSGFALPELEHNLQLLIDLTEQDILQSARRLQHEKDVVVSLSHESKALQ
SRLDEEEDAIHRMEAVLALVDRFPCGETAPGEGPTLQECAHIFETLQTDYYEEYNTMGLA
DLAAAVVHPLLKEKLFCWDPLKDSSYCLEEVGRWRAILESRNLITGGQDSKMDPYHRLLW
EVWVPVMRSSLSGWQPRMVGPMVDCVDLWSPLLPLWISDHLLEHLILPRLQREVDTWNPL
TDTVPIHSWIHPWLPLLQSRLEPLYAPIRSKLANALQRWHPSDASARLILQPWKDVFTPG
AWEAFMVKNIIPKLALCLEELVINPHQQQMEPFHWVMDWDGMLSPSSLVSLLDKNFFPKW
LQVLCSWLSNNPNYEEITKWYLGWKTMFSDALLSQTLIKEKFNEALDIMNRAVSSGMGGY
MQPGARENIAYLTQTERRKDIHYEAMQERRDAESVAHRGATATVPTNFKDLIQTKAEENN
IVFMPIVAKRHEGKQLYTFGRIVIYIDRGVVFVQGEKTWVPTSLQSLIDMAK
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgtcacacctgtacggacggagggaggcggaggaggaaggcgtagagattgaa
aatttcgagatcacagattgggatttggccaatgagttcaacccagaccgccggagacac
agacagaccaaggagcaaatgacttatggcatctgggcagaaggggactctgatgatgag
agacccagttttggaggaaagagatctaaagactacactgcgccagtcaattttgtgagt
gcaggattaagaaaaaacgcatctgatgaaaaacagcaaagggaagaagaagacgactct
gataattcagatgatgacactccttcgacaccactacctcctcgagtttcaatattaaag
aagcctcagaagggtaatttacgaggaaaccagtctcagaggtttgcaggtggtatccag
gctggacaaggaattggctcctgggagaaacacacgaagggaattgggcaaaagctgctg
cagaaaatgggctatcaaccgggccgaggcttgggcaagaatgctcaaggtattatcaat
cctatcgaggcgaaggttcgcaaaggaaagggagctgtgggtgcatatggcaatgaacga
acccaacagagtattcaggattttcctgtggtcgactcggaggaggaggaggaaaaggag
tttcagaaggaactcggtcaatggcgtaaagatccggctgccactggagcgaagaagaaa
ccaaagtatagctacaaaactgtcgaggaactgaaggctaaaggcaaacttgccgggcgc
agcacaggagtatctgctggtgagctggcgcaagtcaaggtaattgatatgactggaaga
gagcaaaaggtatattctagttacagtcagatgtccaacaagcacagtatgcctgaagag
ggtccaccaagcatgtccgcgcgagatcagaaaggatccggctttgcacttcctgaactt
gaacataacctccaactattgattgaccttacggaacaagacatattgcagtcggcccgc
cggctgcagcacgaaaaggatgtggttgtgtcgctgagccacgagtcgaaggcgctgcag
agcaggctggacgaagaggaagacgccatccacagaatggaagcggtgctggctttagtc
gaccgtttcccatgcggcgagacggcgccaggggagggacccactttgcaggagtgcgcc
cacatctttgagactttgcagacggactattatgaagaatataatacgatgggtttggct
gacttggcggcagctgttgttcatccattactcaaagagaaactcttctgctgggatcca
ttgaaggactcttcttattgcctggaagaggttggcaggtggagggcaattctcgaatcg
agaaaccttatcaccggtgggcaagattcaaagatggacccttaccacaggctgctttgg
gaagtttgggtcccagtgatgcggtcctctttgtccggatggcagcctcgcatggtcggg
ccaatggtggactgtgttgacttgtggtctcctcttcttccgctttggatctcggatcac
ttgctcgagcatcttattttacctcggctgcagcgagaggtggatacctggaacccctta
actgacacagtgcccatccactcttggatccacccctggctgcctctgctccaatcacgt
ctcgagcctctttacgcgcccatcaggagcaaattagccaatgctttgcagcgatggcac
cccagcgacgcctcggcacgcctcatcctgcaaccgtggaaagatgtctttactccgggt
gcttgggaggccttcatggtgaaaaacatcatccctaaactagctctgtgtctggaggag
ctggttataaatcctcaccagcagcaaatggaaccctttcactgggtgatggactgggac
ggcatgctttccccctccagcctggtctccctgctggacaaaaacttctttccaaaatgg
ctgcaggtcctgtgttcatggttgagcaacaatcctaattatgaggaaattaccaagtgg
tacctcggttggaaaaccatgttcagtgacgccttgttgtcacagacactgataaaagaa
aagttcaacgaagcgctggacatcatgaaccgtgcggtatcttcaggaatgggtggatac
atgcaacccggtgcaagagaaaacattgcctacctcacgcagacggagagaagaaaggac
atccactacgaggccatgcaagagcgcagggacgccgaaagtgttgctcacaggggggcc
accgccaccgtgcccacaaactttaaagatctcatccagaccaaggcagaggagaacaat
atcgtgttcatgcccatagtggcaaaacgccatgaaggcaaacagctgtacacgtttggg
cgtatagtcatctacatagacaggggggtcgtatttgtgcaaggggagaagacgtgggtt
cccacatctctccagagtctgatagatatggctaagtga
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