Syngnathoides biaculeatus (alligator pipefish): 133500015
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Entry
133500015 CDS
T09681
Symbol
tap2a
Name
(RefSeq) antigen peptide transporter 2a
KO
K05654
ATP-binding cassette, subfamily B (MDR/TAP), member 3 [EC:
7.4.2.14
]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia02010
ABC transporters
sbia04145
Phagosome
sbia05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
133500015 (tap2a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
133500015 (tap2a)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
133500015 (tap2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sbia02000
]
133500015 (tap2a)
Enzymes [BR:
sbia01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
133500015 (tap2a)
Transporters [BR:
sbia02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
133500015 (tap2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_22
AAA_16
SMC_N
AAA_30
AAA_21
ABC_membrane_2
Motif
Other DBs
NCBI-GeneID:
133500015
NCBI-ProteinID:
XP_061674538
LinkDB
All DBs
Position
1:complement(13849044..13855152)
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AA seq
708 aa
AA seq
DB search
MAACACKMAGKSSALRQTFAVFAALVADACLLLAAAPAVRAGGVWVSALRCCLSLATVSL
LNLGELPPVPVRFLAAHSALPAALRSLGEHACGAAAAVDARCWMMCAGASLAAASFWEVA
VPDSGERKDKQYKRRVLFMRVVRMFGPDWLQLLGAFFFLTLAAVSSIQIQFYTGKVIDNL
HDYRPDEFLAALLLMGVFSVGSSVGAGSRGGLFTWATNAFKCRVKAKLFRAQAKQEIAFF
DSTKIGELTSLLSKDIALMGETVCLDINVLLRTLIQTLYTLALMVNLSWTLTCLVLMEVP
VTGLVQTIYKTHHQRLLEATRDSTTAANETANEIISGVRTVRSFEAEKHEVRRYENRLLD
THRLKTRRDVVRVVSLLAQRLTGVAIHVLMLWYGRLLIQRGQMTTGNLVSFILYQSHIGD
NIRTLIYISSDMLNSVGASGKVFEVLDRQPQIRTDGELAPDRLTGRVNFCHLNFAYPAHP
DIAVLQDFTLELPAGQVTALIGVSGEGKSTCVSLLKRLYEPQGGQILLDGAELESYDCCF
LSKKITVVSQDPVLFSGSVRQNIAYGLRDCSLDAVQEAARQAAAHDFIMRLEKGYDTEVG
EGGKLLSKSERQRVAIARALVRRPRVLVLDEVTSSLDERSQSKVLRNLGRHPDRTVLLIT
HALETIEEADQIAVIGGGRVRERGTHRQLMDRKGIYCQMRAKHAAAGS
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgtgtgcgtgcaaaatggccggaaagagttcagcacttcgccaaacgtttgcc
gtgtttgcggccctggtggcggacgcctgcctgctcctggccgcggcgccggcggtgcgc
gcgggcggcgtttgggtgtcggcgctccggtgttgtctgtcgctcgcgaccgtctccctg
ctgaacctcggggagctcccgccggtgccggttcgcttcctcgccgcgcacagcgcgctg
cccgccgccctgcggagcctcggcgagcacgcgtgcggcgccgcggcggctgtcgacgct
cgctgctggatgatgtgcgccggagcctcgctggccgcggcctcgttttgggaagtcgcc
gtgccggactcgggggagcggaaagacaagcaatacaagcgcagggttttgttcatgagg
gtcgttcgcatgttcggaccggactggcttcagctgctcggggctttcttctttctcact
ctggccgcagtcagcagcatccagatccagttttacacgggcaaggtcatcgacaacctg
cacgattacaggccggatgaattcttggcagctctgcttctgatgggggtcttctcagtg
ggaagctcggtgggcgcagggagtcgagggggtctctttacgtgggccactaacgccttc
aagtgcagggtgaaggcgaagctctttcgagctcaggccaaacaagaaattgcatttttc
gactccacaaaaataggtgaactcacctccttgctgtccaaagacatcgccctgatgggt
gagacggtgtgtctggacatcaacgttctgctgaggaccctcatccagaccctgtacacg
ctggccctcatggtgaacctttcctggacgctgacttgtttggtgctcatggaggtcccc
gtcactggtctcgtgcagaccatctacaaaacgcaccatcagcgcttgctggaggccacg
cgcgactccacgactgcagccaacgagacggccaacgagatcatctcgggcgttcggacg
gtgcggagcttcgaggccgagaaacacgaggtccgtcgctacgagaaccgactgctggac
acgcacaggctcaagacccggcgggacgttgtcagggttgtgtcccttctggcacaaagg
ctgacaggtgtggccattcacgtgctgatgctttggtacggcaggctgttaatccagaga
ggccagatgaccaccggcaacttggtctccttcatcctctaccagtcgcacattggagac
aacatccggacgctgatctacatcagcagtgacatgttgaactcggtgggtgcctccggt
aaagtctttgaggttctggatcgacagcctcagatcaggactgatggtgaactcgcaccg
gatcgcctaactggacgcgtcaacttttgccacctcaacttcgcctatccggcacatccc
gacattgcggtgctgcaggacttcactttggagctgcccgcgggtcaggtgacagcgctg
atcggggtgtctggagagggaaaaagcacctgcgtcagtctgctgaagcgcttgtacgag
ccacagggcgggcaaattctgttggacggcgccgagctggaatcgtacgactgctgcttt
ctcagcaaaaagatcacagtggtcagccaagacccggtcctcttctccggttccgtcagg
cagaacatcgcctacggccttcgggactgctcactggatgccgttcaggaagcggcgcgc
caggccgctgcccacgacttcatcatgcggttggagaagggctacgataccgaggttggc
gagggcggcaagctgctgtccaaaagcgagcggcagcgcgtggccatcgcccgagcgctg
gtcagacggccgcgggttctcgtcctcgacgaagtcaccagctccctggatgagcgcagt
caaagcaaggtcctgcggaacctggggaggcacccggaccggacggtgctgctgatcact
cacgcgctggagaccatcgaggaggccgaccagatcgcggtgatcggcggcggtcgtgtt
cgggagcgggggacccaccgccagctgatggacaggaaggggatctactgtcaaatgagg
gcgaaacacgccgcggcgggaagctaa
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