Syngnathoides biaculeatus (alligator pipefish): 133500149
Help
Entry
133500149 CDS
T09681
Name
(RefSeq) retinoic acid receptor RXR-beta-A isoform X1
KO
K08525
retinoid X receptor beta
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03320
PPAR signaling pathway
sbia04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
133500149
03320 PPAR signaling pathway
133500149
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbia03000
]
133500149
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sbia03310
]
133500149
Transcription factors [BR:
sbia03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
133500149
Nuclear receptors [BR:
sbia03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
133500149
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
133500149
NCBI-ProteinID:
XP_061674641
LinkDB
All DBs
Position
1:13770073..13789558
Genome browser
AA seq
469 aa
AA seq
DB search
MGDSRDSRSPDSSSVSSPPSGQRSPPLAPSAAASMTSLPPISSAGVNSPISSIGSPFSVI
SSSLGSPCLPGTPSVGYGPISSPQINSTVSMSGLHTVSSSDDVKPPIGLKLSGHSPGPML
SQKRLCSICGDRSSGKHYGVYSCEGCKGFFKRTVRKDLTYTCRDSKDCMVDKRQRNRCQY
CRYQKCLAMGMKREVAKMNDRSVQEERQRNKEREGEVESTSMVNEEMPVEKILEAEMAVE
QKTELHADGSSGGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGW
NELLIASFSHRSISVKDGILLATGLHVHRSSAHSAGVGAIFDRAHNAEVGAIFDRVLTEL
VSKMRDMQMDKTELGCLRAIILFNPDAKGLSNPSEVELLRERVYASLETYCKQKYPDQQG
RFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLT
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgggagacagtcgagattcacgcagtccggacagttcgtcggtgtcctccccgccgtca
ggccagcgctcaccacctctggcgccgtcagcggcagcctccatgacctcgctgcctccc
atctccagcgccggggtcaacagccccatcagtagcatcggttcccctttttccgtcatc
agctcctcgctgggctccccctgcctgcccggcacgccatcagtcggttatggtcctatt
agcagcccgcaaataaactccacagtgtccatgtccggacttcacaccgtgagtagctca
gacgacgtcaaacctccgataggcctgaagctttcgggtcacagcccgggcccgatgctc
tcccagaaacgcctttgttcaatttgcggcgaccgatcctccggaaagcactacggcgtg
tacagctgcgagggctgcaaaggcttcttcaagcggacggtgcgcaaagacctgacgtac
acctgtcgggacagcaaagactgcatggtggacaagaggcagaggaaccgctgccaatac
tgccgctaccagaagtgcctggccatgggcatgaagagagaagtggctaagatgaacgac
agatcggttcaagaggagcgtcagaggaacaaagagcgcgagggcgaggtggagtccacc
agcatggtcaacgaggagatgcctgtggagaagatcttggaagcggagatggccgtcgag
cagaagacggagctgcacgccgacggaagctctggaggaagctctcccaacgaccccgtc
acgaacatctgccaagctgcagacaagcagctcttcaccctggtggaatgggccaagagg
atcccccacttttcggaactgcccctcgacgaccaggttatcttgctccgcgcaggctgg
aacgagctgctgatcgcctccttctcgcaccgctccatctcggtcaaggacgggatctta
ctggccaccggcctccacgtgcacaggagcagcgctcacagcgccggcgtcggagccatc
ttcgacagggcgcacaatgctgaggttggggccatattcgacagggttctgaccgagctg
gtgagcaagatgagagacatgcagatggacaagactgagctgggctgcctacgggccatc
atcctcttcaatccagatgccaagggtttgtccaaccccagcgaggtggagctgctgaga
gaaagggtgtacgcgtctctggaaacgtactgtaagcagaagtacccggaccagcagggc
aggttcgccaagctcctcctgcggctgccggcgctgcgctccatcggcctgaagtgcctg
gagcacctgttcttcttcaagctgatcggcgacacccccatcgacaccttcctcatggag
atgctggaggcccctcaccagctcacctag
DBGET
integrated database retrieval system
