Syngnathoides biaculeatus (alligator pipefish): 133500310
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Entry
133500310 CDS
T09681
Name
(RefSeq) tenascin-like
KO
K06252
tenascin
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04510
Focal adhesion
sbia04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
133500310
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
133500310
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
sbia00536
]
133500310
Glycosaminoglycan binding proteins [BR:
sbia00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
133500310
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Fibrinogen_C
fn3
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
EGF_Teneurin
Fn3_Dep-1_2nd
EGF_TEN
EGF_2
FN3_Tor_3rd
Gryzun
EGF_Tenascin
Motif
Other DBs
NCBI-GeneID:
133500310
NCBI-ProteinID:
XP_061674834
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All DBs
Position
5:4162435..4167955
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AA seq
757 aa
AA seq
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MTHKINLMSGGCAGGCEAEMVEMKKRLARLEREMSLLKNKCPCSANCPNDCSGNGECQKG
KCICQDGFKGPDCSNCAQGAECRKQEAKGIIKVKVDTEAQKANKERTTMEENIQERTKSV
EQVQLEKNDQKKVTGDKESETKSKLAGTAKLGLAKAQRMFNNFTVIRREPQTEGNEEEDQ
EFEEEAFETDNVHASKNTMEVQVHKESAFSSSKVVASRSKAETKRIMLLVPGSVRSVEFS
NLRSNTRYVLEIYGTTDNRRSKIHRVIATTGPEPATDMQFSNITETSLMVSWSKPKTTIT
GYTITYTHIVTGETHSVNLDSQKTHVVLSKLSAGSSYIITVTTTQGRVQGDGLVSIITTV
PAPPTHLRAINVTDTRAVLQWTPSMGKVDRFIVSYESSKTPNVTVTVMVSGNSVEHQLRG
LQRGTVYTVKVLSQKDSLQSAAITTSFTTANVVKASEVGARSALIVWRMSTVVYHSYRLT
YQVVGEEAMELILEPTITEYKLTGLFPMSRYNVLVEGERDGRYTSIVTTEFITGRLRFPY
PTECSQELLNGALQSGEVDIYPQGKGGQVFRVYCDMETDGGGWTVFQRRMSGKTDFYKTW
SEYRAGFGNLSEEFWLGNELLHNLTSIGPVSLRVDLQSGNETAYAHYANFSIDSEENHFA
LVVSGYTGTAGDSMRYHNERPFSTRDKDPDSLGIHCSRAYMGGWWYKNCYKANLNGLYGT
NTNNQGVVWIDWKGKDSSIPLTEMKFRPSRFSPSTHG
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgacacataagatcaatttgatgtccggaggctgtgccggtggctgcgaggctgagatg
gttgagatgaaaaaacgcttggccaggctggagagagagatgtccttgttgaagaacaaa
tgtccatgttctgcaaattgcccaaatgattgtagtggcaatggagaatgtcagaaagga
aaatgcatctgccaagatggattcaagggtccagactgcagtaactgtgcccaaggagca
gagtgcagaaaacaagaagccaaagggatcatcaaggtaaaagtggacacagaagcccag
aaagcgaataaagaaagaacgactatggaggaaaacatccaggaaagaaccaaaagtgta
gagcaggtacaactggagaagaatgaccagaagaaggtgactggtgacaaggagagtgag
accaaatcaaagttagccggtactgctaaattaggtcttgcaaaggcacaaagaatgttc
aataacttcacagtgatcagaagagagccacaaacagaaggcaatgaggaggaggatcag
gagttcgaagaggaagcctttgagacagacaatgtccacgcatcgaagaacacaatggag
gtccaggtgcacaaggagagcgcgttttcttcgagtaaagtcgttgcatcaagaagtaaa
gcagaaaccaagcggatcatgctgttggtgccaggcagcgtgcggtcagttgagttcagt
aaccttcgcagtaacacgcgctatgtcctggaaatatacggtacaacagataacagaaga
tccaagattcacagagttattgcaactacaggtcccgagccggccacagatatgcagttc
agtaatataacggagacttcactcatggtatcctggtccaaacccaagacaacaatcaca
ggctacacgatcacatatacccacattgtcacaggtgagacccattcagtgaacttggac
tctcagaagactcatgtggttctttccaagttatccgctggatcgtcctacataatcaca
gttaccactacacaaggcagagtccagggtgatggacttgtgtccattatcaccacagtg
cccgcaccgccaacccacctccgagccatcaatgtgacagataccagagcggtgctgcaa
tggacccccagcatgggaaaggtagaccgtttcatcgtcagctacgagtcctccaagact
cctaatgtgactgtgacagtgatggtgtctggaaactcagtggagcaccagctgagaggc
ctgcaaaggggcaccgtatacacagtcaaagtcctgagccagaaggacagccttcagagc
gcagccattacgacgtctttcaccactgccaacgtggtcaaagccagcgaagtgggtgct
cgctctgctctgattgtttggagaatgtccactgtggtttatcacagctacaggttgacc
taccaagtggtaggagaggaggcgatggagcttatcctcgagcctaccatcacagagtat
aaactgacggggctgttcccaatgtcacgctataacgttctggtcgaaggcgagagagac
ggacgttacacatcaattgtaaccaccgaattcatcacagggaggctgcgtttcccctac
ccgactgagtgctctcaggagctgctaaatggagctcttcagtccggtgaggtggacatc
taccctcaggggaaggggggccaggtcttcagagtctactgcgacatggagactgatgga
ggcggttggacggtgttccaaagaagaatgagtggaaaaacagatttctacaaaacctgg
agtgaatacagagctggatttggaaacctcagtgaagagttctggctcggaaatgagctt
ctgcacaacttgaccagcatcggtcctgtgagtttgagggtagacctgcaatctggaaac
gaaacggcttatgctcactacgccaacttttccattgattctgaggagaatcattttgca
ctcgtggtgtccggatacacaggaacagcaggtgactcaatgaggtaccacaacgaacgt
ccattctcaacccgggataaggaccccgactctttggggatccactgttctcgggcctac
atgggaggttggtggtacaaaaactgctacaaagccaacctcaacgggctttacggcacc
aacacaaacaatcagggggtggtgtggatagactggaaaggtaaagactcctccattccc
ttgacggagatgaagttcagaccatccaggttttccccctcgacacacggttaa
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