Syngnathoides biaculeatus (alligator pipefish): 133500387
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Entry
133500387 CDS
T09681
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent translocase ABCB1-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
133500387
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sbia02000
]
133500387
04147 Exosome [BR:
sbia04147
]
133500387
04090 CD molecules [BR:
sbia04090
]
133500387
Enzymes [BR:
sbia01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
133500387
Transporters [BR:
sbia02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
133500387
Exosome [BR:
sbia04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
133500387
CD molecules [BR:
sbia04090
]
Proteins
133500387
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
Zeta_toxin
RsgA_GTPase
AAA_22
Rad17
AAA_28
AAA_16
AAA_15
AAA_18
PRK
AAA_29
G-alpha
AAA_21
ATP-synt_ab
AAA_7
AAA_5
Motif
Other DBs
NCBI-GeneID:
133500387
NCBI-ProteinID:
XP_061674980
LinkDB
All DBs
Position
5:26655709..26669872
Genome browser
AA seq
739 aa
AA seq
DB search
MDETDTLQKDSSEIYLRKEKDKIQQVGPIGLFRFADGLDVVLIIFGTVMSMVHGLMFPLM
CIMFGNVADTFIQYSKMSKINTSHASEFTETENVAGXEKVSSFAIYFIITSAILNVAAYM
QGAFFALTAGRQIKRIRKHFFHSIMRQDIGWFDVNETTTLNTRLIDDIWKIQEFIGDKMG
MLIHSVSTFILSVIISLVIGWKLALVTLAACPFLGLSATLFNKVLMSYSSKEQAAYAKAD
AVAQEVLSAIRTVLAFNGQQRELERYHKCLEAVKKIGVERSINSNLIRGFSLMVMYLSYA
LAFWYGSTLILSGDKAYTIGTVLKVLFTLFAGTFAFGKMSPNLKAFVIAQGAAHQVYTII
DRKSPIDSYSKSGFKPDSVNGNIEFRNVHFNYPSRPGVKVLNNMSLSVKSGQTIALVGSS
GCGKSTIIQLLQRFYDPHKGTVSIDDYDIRSLNICYLRGMIGVVNQEPVLFATSIAENIR
YGRTNVTQHELEQAAKEANAYDFIMNLPEKFETVVGDRGTQMSGGQKQRIAIARVLVRQP
KILLLDEATSALDSESKTIVQAALDKVRLGRTTIIVAHSLSTIRNADMIAVFQHGEVVEL
GTHSQLMRKKGVYHTLSTIQMFQKAKDKDQQNCEHNENCSPVKTSETSTYRWKSTKCSSS
ADVEENKESENLVDDNGKTEEVKSDPPSLFLKVMHFNLAEWPYILLGIITAAITGIAKPV
YGVLISKFISVGILTFTPK
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaacagacacgctgcaaaaggactcttcagaaatttatttaaggaaagaaaaa
gacaagatacagcaggttggccccattggactgtttcggtttgcagatgggttagacgtt
gtactgatcatcttcggaactgtgatgtcgatggtccatgggctaatgttccccctcatg
tgtatcatgtttgggaatgtagcggacacattcattcaatattcaaaaatgtctaaaatc
aacaccagccatgccagtgagttcacagagacagaaaacgtcgctgggtaagagaaagtt
agcagctttgccatctacttcatcatcaccagtgcaatattgaatgtggctgcctacatg
cagggtgctttctttgcactgactgctgggcgacagatcaaacgcattcgcaagcatttt
ttccacagcatcatgcgacaggacatcggttggtttgatgtcaacgagacaacaacactc
aacactcgtctcattgatgatatctggaagatccaagagtttataggagacaagatgggg
atgctgatccactctgtttccaccttcatcttatccgtcatcatcagtttagttatagga
tggaaactggctctggtcaccttggcagcctgcccctttctcggcctttcagccaccctt
tttaataaggtactgatgtcatactcttctaaagaacaggctgcttatgccaaagcagat
gcagttgcacaggaggtgctttctgccatcaggaccgtgcttgccttcaatggtcagcaa
agagagctcgagagatatcataagtgtttggaggccgtgaagaaaataggagtagagagg
tcgataaattcaaatttaatcaggggcttttcccttatggtgatgtacctgtcttatgct
ctggccttctggtatgggagtacactcattctgagtggagataaagcatacaccatcgga
actgtactcaaggttttattcactttgtttgctggaacatttgcctttgggaaaatgtca
cctaacctcaaggcttttgtcattgcccaaggagctgcacaccaagtgtacaccatcatt
gacagaaaatcacccatcgacagctattcgaaaagtggcttcaagcctgactcagtcaat
ggaaacatagagtttaggaacgttcactttaactacccctcaaggccaggagtcaaagtc
ttaaacaatatgtccctgagtgtgaagagtggacaaaccatcgccttggtgggaagcagt
ggctgtggtaaaagcactatcatccagctgttgcagaggttctatgatcctcacaaggga
acggtttctattgatgattatgacatccgttctctcaatatctgctaccttcgagggatg
attggcgtagtgaatcaagagcctgtcctttttgctactagcatcgctgaaaacattcga
tatggacgaaccaatgtgacacagcatgagttagagcaagctgccaaggaggccaacgct
tatgacttcatcatgaaccttcccgaaaagtttgagacggtggttggggaccgagggact
cagatgagtggaggtcagaagcagagaattgcaatcgctcgggtgctagtccgtcaaccc
aaaatccttttgctggatgaagcaacatctgctcttgattccgagagtaagactattgtg
caagctgcactcgacaaggtcagactgggtcgtaccaccataattgtggcccatagtctc
tcaacgatcagaaatgccgatatgattgctgttttccaacatggagaggttgtcgagctg
gggactcatagccaactgatgagaaaaaaaggtgtctaccatactctcagtacgatacag
atgtttcagaaagctaaggataaagatcagcagaattgtgagcataatgagaactgctca
ccagtcaaaacttctgaaacttccacgtataggtggaagtctacaaaatgttcttcctcc
gctgatgtagaggaaaacaaagagagtgaaaatttggtggatgacaatggcaaaacagaa
gaggttaaaagtgatccaccttctttgtttctcaaagtgatgcatttcaacctcgctgag
tggccttacattttgttgggaatcattactgctgcaatcactggaatagctaaacctgtg
tacggggtcctcatctcaaagttcatcagtgtaggcatactgacattcacacctaaatag
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