Syngnathoides biaculeatus (alligator pipefish): 133500412
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Entry
133500412 CDS
T09681
Symbol
ntrk1
Name
(RefSeq) high affinity nerve growth factor receptor
KO
K03176
neurotrophic tyrosine kinase receptor type 1 [EC:
2.7.10.1
]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04010
MAPK signaling pathway
sbia04020
Calcium signaling pathway
sbia04210
Apoptosis
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
133500412 (ntrk1)
04020 Calcium signaling pathway
133500412 (ntrk1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
133500412 (ntrk1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sbia01001
]
133500412 (ntrk1)
Enzymes [BR:
sbia01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
133500412 (ntrk1)
Protein kinases [BR:
sbia01001
]
Receptor tyrosine kinases (RTK)
TRK family [OT]
133500412 (ntrk1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
I-set
Ig_3
Ig_2
LRRCT_2
LRR_8
ig
C2-set_2
LRR_5
C2-set_3
CFC
Haspin_kinase
TrkA_TMD
Motif
Other DBs
NCBI-GeneID:
133500412
NCBI-ProteinID:
XP_061675018
LinkDB
All DBs
Position
5:complement(1007129..1034465)
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AA seq
799 aa
AA seq
DB search
MAVASLALALPLLLLLSLAPAPTSEGCPSACRCSFAMLQCLEPDGIAGIPALAPQESENV
TEIYIENQAGLENITQAELINYKELKNLTVTSCKLRRIAADAFRHNLKLQYVNLASNRLE
HISWRVFHFLPLLNLVLLDNPLACSCDLHWLQHRQRGERADPDEPPLTCVAAGRRVPLDS
LVVDNCSLPEVTILPSNTKVQEGGNLTFECHVTGSPTPQVKWRTDALHSRFFPQERIWGS
TLEVVLFLSNVSSSDNLHNLTCEAENQAGPGEDAVQLDVEFPARILYLRNAVPMHHWCFP
FAVDGNPEANISWQYEGSALKETALTYTQLFPDSADGSKKHGCLFLDKPTHINNGRYTLL
VDNKLGKDQASAAGMFMDNPFGLLEPEGLIPVIDVDPTPANKSVADVTENLESRVSVVSV
AVGLALFACAFLLAAALVIHKCGRESKFAIHRSSVLAAEEELAMSLRFTNFGTSPPSSDE
DSGLSSFVENPQYFCGILKDKDMSVQHIKRADVVLKWELGEGAFGKVYLAECANLSLDSD
KMLVAIKTLKDANESTRQDFQREAELLTVLQHQHIVRFYGVCADGEPLAMVFEYMRHGDL
NRFLRAHGPDAGILEESKMAPAGELTVPQMLHIAAQIASGMVYLASLHFVHRDLATRNCL
VGEGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESIMYRKFTTESDIWSFGVVL
WEIFTYGKQPWYQLSNSEAIECITQGRELERPRTCPQQVYALMRGCWQREPQQRTLIKDI
HARLLALVKNPPVYLHILA
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggcgtctctggcgctggcgctgcccctgctcctgctcctgagcctggcaccg
gcgcccacttcggaaggttgcccgtcggcctgccgctgctctttcgccatgctgcagtgc
ctggaacccgacggcatcgccggcatccccgccctggcgccgcaggagagcgagaacgtg
acggagatctacattgaaaaccaagcgggcctggaaaacataacccaagcagaactgatc
aactacaaggagctaaaaaacctcacggtgacgtcgtgcaagctgagacgcatcgccgcc
gacgccttccgccacaacctcaagctgcagtacgtgaacttggcctccaaccgtctggag
cacatctcgtggagggtctttcacttcctgccgctgctcaacctggttctgctggacaac
cctctggcctgctcgtgcgacctccactggctgcagcaccggcagcgcggcgagcgcgcc
gacccggacgagcccccgttgacgtgcgtggccgccggacgccgagtgccgctcgactcg
ctcgtcgtcgacaactgcagtctgcccgaggtcaccattctgccctccaacaccaaagtc
caggaggggggcaacctgacctttgagtgtcacgtgaccggaagtcccaccccgcaagtc
aagtggcgcacggacgcgctgcactcgcgcttcttccctcaggagagaatctggggctcg
acgctggaggtggtcctgttcctgagcaacgtgtcgtccagcgacaacctgcacaatctg
acgtgcgaggccgagaaccaggccgggcccggggaggacgccgtgcagctggacgtcgag
ttccccgccaggatcctgtacctgaggaacgcggtccccatgcaccactggtgcttcccg
ttcgccgtggacggcaacccggaggccaacatcagctggcagtacgaaggctcggcgctg
aaggagacggccttgacgtacacgcaactcttccccgactcggccgacggctccaagaag
cacggctgcctgttcctggacaagccgacccacatcaacaacgggcgctacaccctgctg
gtggacaacaagctgggcaaagaccaggccagcgccgccggcatgttcatggacaacccc
ttcggactcttggaacccgagggcctcattcccgtcatcgacgtggatccaactcccgcc
aacaaatccgtcgcggacgtcacggagaacctggagagtcgagtctctgtggtatccgtg
gccgtgggtctggccctgttcgcttgcgccttcctgctggcggccgccttggtcatccac
aagtgcggacgcgagtccaaattcgccatccaccgttcgtccgtgctggctgccgaggaa
gaactggccatgtcgctgcgcttcaccaacttcgggaccagcccgccgtcctcggacgaa
gactcgggcctgtccagcttcgtggagaacccgcagtacttctgcggtatcctcaaagac
aaagacatgagtgtgcagcacatcaagcgggcggacgtcgtgctgaagtgggaactgggc
gaaggcgctttcggcaaagtctacctggccgagtgcgccaacctcagcctcgacagcgac
aagatgttggtcgccatcaagaccctgaaggacgccaacgagtcgacccggcaggacttc
cagagggaggcggagctcctgacggttctgcagcatcagcacatcgtgcgcttctacggc
gtgtgcgccgacggggagccgctcgccatggtcttcgagtacatgcgccacggagacctg
aaccgcttcctccgagctcacggtcccgacgctggcatcctggaggagtccaagatggcg
ccggcgggcgaactgaccgtacctcagatgctccacatcgcggcccagatcgcgtcgggg
atggtgtacctggcctcgctgcacttcgtccacagagacctggccacgcgcaactgcctg
gtgggagaaggcctggtggtcaaaatcggagactttggcatgtccagggacatctatagc
accgattactatcgggtggggggccgcaccatgctgcccatccgctggatgccgcccgag
agcatcatgtacaggaagttcaccaccgagagcgacatctggagcttcggcgtggtcctc
tgggagatcttcacctacggaaaacagccctggtaccagctgtccaacagcgaggccatc
gagtgcatcacgcagggccgcgagctggagcgcccgcgcacttgcccgcaacaagtttac
gcactgatgcgcggctgctggcagcgagaaccccaacagcggacgctcatcaaggacatc
cacgcccgcctcctcgccctcgtcaagaacccgcccgtctacctccacatcctggcttag
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