Syngnathoides biaculeatus (alligator pipefish): 133500415
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Entry
133500415 CDS
T09681
Symbol
taf2
Name
(RefSeq) transcription initiation factor TFIID subunit 2 isoform X1
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
133500415 (taf2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sbia01002
]
133500415 (taf2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbia03021
]
133500415 (taf2)
03036 Chromosome and associated proteins [BR:
sbia03036
]
133500415 (taf2)
Peptidases and inhibitors [BR:
sbia01002
]
Metallo peptidases
Family M1
133500415 (taf2)
Transcription machinery [BR:
sbia03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
133500415 (taf2)
Coactivators
SAGA/TFTC/STAGA complex
133500415 (taf2)
Chromosome and associated proteins [BR:
sbia03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
133500415 (taf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_2
Peptidase_M1
Peptidase_M1_N
IL2
SR-25
Motif
Other DBs
NCBI-GeneID:
133500415
NCBI-ProteinID:
XP_061675022
LinkDB
All DBs
Position
5:33394282..33567117
Genome browser
AA seq
1203 aa
AA seq
DB search
MNRKRDKGFESPRPFKLTHQVVCINNINFQRKSVIGYVELTILPTVPNLNRIKLNSKQCR
IYRVRINDLEAPFIYNDPTLEVCHSESKQRNLNYFSSAYTAAVSAVDPDAGHGELVIKVP
SELWKQGDDSHLLKVYIEFSLDQPKGGLHFVIHDLEGSLAERGAHVFSFGHHNSTRFWFP
CVDSYSELCTWKLEFTIDSTMVAVSCGDLVETIYTHDMRKKTFHYVLPIPTAAPNISLAV
GPFEILVDPYMHEVTHFCLPQLLPLLKHSMSYLHEIFEFYEEILTCRYPYSCFKTVFVDE
SYVQVSSYASMSIFSTNLLHSSMVIDQTPLTRRCLAQALAQQFFGCFISRMSWADEWVLK
GISGYIFGLYLKKTFGVNEYRHWIKKELDKIVEYEQKMGGVLLHPTFSGGKEKDNPTPHL
HFSLKHPHTLSWEYYKMFQCKSHLVMRLIENRISMEFMLQVFNKLLSLASTASSQRYQSH
MWSQMLLSTHAFLKSISNVSGKDISPLIKQWVDQSAVVKFYGSFVFNRKRNVLELEIRQD
YTSSGTQKYVGPIKVTVQELDGSFNHTLQIEESSLKHDIPCHSKSRRNKKKKIPLMNGEE
VDMDLSAMDADSPLLWIRIDPDMSILRKVELEQADFMWQYQLRYERDVVAQEEAISALET
FPTPASRLALTDILEQEQCFYKVRMQACFCLAKIANAMVSTWQGPPAMKSLFTRMFCCKS
CPNIIKTNNFINFQSYFLQKTMPVAMALLRDVQNLCPKDVLSFILDLIKYNDNRKNKFSD
NYYRADLLEALTNSLTPAISINNETRTVDNLNADVRLILEEITRFLNMEKLLPSYRSTIT
ISCLKAIRQLQKNGHIPSEASLFRSYAEYGHFVDVRVAALEALVDYTRVEKSSDELQWLL
NLVQNDPAPYVRHKILAMLCTNPPFTKLTESTICNEALVDQLWKLMNSGTSHDWRLRCDA
VNLYYTLFGLTRPSCLPLPELGLVLNLKEKKAVLNPTIKPELMVDAVIDTPASIGIHGIG
LNYPPEDEEADPISLGVCGVGQPPQGVKRKAETQLGSPPELGQTLQHQDDNCRVARHKIR
FNMEDEDIDMETVHDSQAFIHHHLNLLDRPSTPGKEPASIEQSTLSMPPTPIPSLSKDTL
SLPLKHRGEHGHHHHEHKKKKKKKHKHKHKHKHENKERERGNWHPYSNSPVSGKPLHSPS
LSE
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgaacaggaaaagggataaaggatttgagagtccacgaccctttaaattgacccaccag
gtcgtgtgcatcaacaatatcaacttccagaggaagtctgtaattggctatgttgaactg
accatactccctacagtacccaaccttaacagaatcaaattgaacagtaaacagtgccgt
atctacagggtccgaatcaatgatcttgaagctccattcatttataatgacccaactttg
gaagtttgccacagcgagtccaagcaaaggaatctgaactacttttccagtgcctatact
gcggctgtgagtgctgtggacccagatgcaggacatggggagttggtcatcaaagttcct
tctgaactctggaaacaaggagatgattcacatcttttaaaggtatatattgaattttcc
ctggaccagcctaaaggaggtctccactttgttatccatgatttggaaggcagtttggca
gagagaggtgcccacgtgttctccttcggacaccataactccactcggttctggttccct
tgtgtggattcctactcagagctgtgtacgtggaagcttgagttcaccatagattccacc
atggttgcagtgtcatgtggtgacctagtcgagacaatatacacgcatgacatgaggaaa
aaaactttccactatgtcttacctatcccaactgcggctcccaacatttccctggctgta
gggccctttgaaatccttgttgacccctacatgcatgaggtgacccacttttgcctgcca
caactgctgcctcttctcaagcattcaatgtcttacctgcatgagattttcgagttctat
gaagaaattcttacatgccgctacccatattcttgctttaagactgtgtttgtggatgag
tcctatgtgcaagtgtcttcctatgcttccatgagcatctttagcaccaaccttcttcat
agctctatggtcattgaccagacccctttgactcgtcgttgccttgcccaggccttggct
cagcaattttttggttgtttcatctccaggatgtcttgggctgatgagtgggttttgaag
ggaatctcaggctatatatttggtctttatctgaagaagacgtttggagtgaatgaatac
cgtcactggatcaaaaaggagttggacaagattgtggaatatgaacagaagatgggaggc
gttcttttgcacccaacatttagtggaggcaaagaaaaggacaacccaacccctcacctt
catttctctttgaagcacccacacacattgtcatgggagtactacaaaatgttccagtgt
aagtctcacttggtgatgaggctgattgaaaacaggatcagtatggagttcatgttgcag
gttttcaacaaacttttgagtctggccagcacagcctcatcacagagataccagagtcac
atgtggagccagatgcttctttctactcatgccttcttgaaatccatctctaatgtgtct
ggcaaagatatttcccctcttatcaaacaatgggtagatcagagtgctgtcgtaaaattc
tatggcagctttgtattcaacagaaagaggaatgttttggagctggagatccggcaagac
tacacatcttctggaactcagaaatatgttggtcccataaaggtgactgtgcaggaacta
gatggctcattcaaccatactttgcagattgaggagagcagcctcaaacatgatattcca
tgtcactccaagagccgaagaaacaagaaaaagaagattccactgatgaatggagaggaa
gtggacatggacttatcagccatggatgctgactctcctcttctctggatccggattgac
ccagacatgtccattctgaggaaggtagaattggagcaagccgactttatgtggcaatac
cagctgcgttatgaaagggatgtggttgcacaggaggaggccatatctgctcttgaaaca
ttcccaactcctgcttccagactggctctcactgacatccttgaacaagaacagtgtttc
tacaaagtccgcatgcaggcctgcttctgtttggcaaagattgccaatgctatggtgagc
acatggcagggccctccagctatgaagtctctttttaccagaatgttctgctgtaagagc
tgccctaatatcataaagaccaacaacttcatcaacttccagagctatttcctgcaaaag
acgatgcctgttgccatggcattactcagagatgtccagaacctctgtcccaaagatgtc
ctcagcttcatacttgaccttatcaagtacaacgacaacaggaaaaacaaattctcagat
aattactaccgtgcagatctgcttgaagcactgaccaactctttgaccccagccatcagc
attaacaatgagacgcgaacagtggacaatttaaatgctgatgtacgtctaatcttggag
gagataaccagatttcttaacatggaaaaactattgccaagctacagaagcacaattact
atcagttgtcttaaagccattcgccaacttcaaaaaaatggtcacatcccaagtgaagca
tcactcttcaggtcctatgcagagtatggacactttgttgatgtacgtgttgctgcttta
gaggctctagtggactacacaagagttgaaaagagttcagatgagctccagtggcttctc
aacctcgttcagaatgacccagcaccttatgtcagacataaaatcctagccatgctttgt
acgaatccacccttcaccaagttaacagaatcaactatatgcaatgaagcgctggtggac
cagctttggaagcttatgaactcaggtacctctcatgattggcgcctgcgttgcgatgct
gtgaacctctactacacattgtttggtttgactcggccttcttgcctgcccctccctgag
cttggtcttgtgttgaacctaaaggagaagaaagctgtactaaaccccaccatcaaacct
gaattgatggttgatgcagttatcgacacacctgccagtataggaatccatggcattggc
ttaaattacccacctgaggatgaagaggctgatcctatttcacttggtgtgtgtggggta
ggacagcctcctcagggcgtcaagagaaaagcagagactcagttgggctcccctccagaa
ctcggacagacactgcagcatcaggatgataattgtcgagtcgcccgccacaagatcaga
tttaacatggaagatgaagatattgatatggagactgttcacgatagtcaggccttcatt
caccatcacctcaatcttctggacagaccctctacaccaggtaaagagccagcatccatc
gaacagtcaacactatccatgccacccacgccgataccatccttatccaaagacaccctg
tccttacctctgaaacacagaggtgagcatggacaccaccaccatgagcacaagaagaag
aaaaagaaaaagcacaagcataaacacaagcacaagcatgaaaacaaggaaagagagagg
ggtaactggcatccctacagcaatagcccagtgagtggcaaacccctgcattcaccatcg
ctatctgaataa
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integrated database retrieval system
