KEGG   Syngnathoides biaculeatus (alligator pipefish): 133500476
Entry
133500476         CDS       T09681                                 
Symbol
xrcc1
Name
(RefSeq) DNA repair protein XRCC1 isoform X1
  KO
K10803  DNA-repair protein XRCC1
Organism
sbia  Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:sbia00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    133500476 (xrcc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sbia03400]
    133500476 (xrcc1)
DNA repair and recombination proteins [BR:sbia03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     133500476 (xrcc1)
SSDB
Motif
Pfam: XRCC1_N BRCT BRCT_2 PTCB-BRCT LIG3_BRCT SLC12
Other DBs
NCBI-GeneID: 133500476
NCBI-ProteinID: XP_061675151
LinkDB
Position
5:13026220..13050775
AA seq 617 aa
MPEIKLHHVVSCSTEDSTHKADNLLSSDTYRKWKAARAGEKQTSVILQFEKEEQVHSIDI
GNEGSAFVEVLVGNSSAARDQDYEVILVTSSFMTPTESRNGTNMSRVRFFGPGQLQKSTA
QEKWDRVKIVCSQPYSKNIAYGLAFVKFHSPPDKNDPPVTSPQKLTKLGQFRVKDDTAAS
GSSIQPGSLFFSTKSNTSPKVSPQSNKLSYAAATLQAAGPAGPPTAPPSSSTSPQAPAKR
KFEFDKERESVPGPPHPKRSSTGNSPEFKPATPKVKSSTPSPNASKASSVKMFAEKRHES
LPKTKEQPSKGVKSLEKVPFKRVMEGVVFVLSGFQNPFRGELREKALEMGAKYRPDWTPD
STHLICAFANTPKYSQVKSAGGMIVRKEWVLDCHKRKQKLSYKSYLMDGAESSSESDMEA
DDQSEEEVRVKTVQKQPRHVSPKKEIRNVEDEYAGSTDVDDEPGGDEDSAADTEDELQRV
ENENSQKKKKAVKQPQPEQEEDPYGGSTDENTDAEQEQDHPIPDLPDYLNGKHFFLYGKF
PNNERRLLTRYIAAFNGVLEDYMSDTVHFVVTGEGWHDSFEDALMDNGNLNFVKPAWIFA
INQRQKLLPYQPYTVVP
NT seq 1854 nt   +upstreamnt  +downstreamnt
atgcccgaaatcaaactccaccacgttgtgtcgtgtagcacagaggacagtactcacaag
gcggacaacttgctgagctcggacacgtacagaaagtggaaagccgcccgagccggagag
aagcagacgtcagtcattcttcagtttgagaaggaggagcaggtgcacagcatcgacatt
ggaaatgaagggtcggcatttgtcgaggttttggtggggaattcctctgcagccagagac
caggactatgaggtgatactggtcacttcgtccttcatgacacccacagagagccgtaac
ggcactaacatgagcagggtacgcttctttggacccggacaactgcagaagagcacagca
caggagaagtgggaccgagtgaaaattgtctgcagccagccttacagtaaaaacatagca
tacggcttggcctttgtcaagttccattcacctccggacaaaaacgaccctccagtgacg
tctccgcagaaattgaccaaactgggtcagttccgggtgaaagacgacaccgctgcctca
ggctctagcatccaacccggcagtctcttcttcagcaccaagtccaatacttctcccaaa
gtctcaccacagagtaacaagttgagctacgctgccgcaaccctgcaagctgccgggcct
gccggcccgcctaccgctcctccgtcatcgtccacctcaccacaggcacctgcaaagaga
aagttcgagtttgacaaagagcgtgagtcagtccccggtcccccacacccgaagagaagc
agcacgggaaactcgccggagttcaaacctgcaactcccaaagtcaagtccagcacgccc
agccccaatgcctccaaagcctcgtcagtgaagatgtttgccgaaaagaggcatgagagt
ttgccgaaaaccaaagagcagccatccaaaggagtaaagagtttggagaaagtgcccttc
aagcgcgtcatggagggagtggtgttcgtcctcagcggttttcagaatcccttcaggggg
gagctgagggagaaggctctggagatgggagccaagtaccggccagactggacgcctgac
tcgacgcacctcatctgtgcctttgcaaacactcccaagtacagccaggtgaagtcagcg
gggggcatgatcgtgcggaaggaatgggtgcttgactgccataaaaggaaacagaaactc
tcctacaaaagttatttgatggatggtgcagagtcgagctcagagagcgacatggaggca
gacgaccagagtgaggaggaagtcagggtaaagactgtccagaaacagcccagacatgtt
tctcccaaaaaggagataaggaacgtggaggacgagtacgccggctccactgatgtggac
gacgagccaggcggtgacgaggactctgccgctgacacagaggatgagcttcaaagggtg
gagaacgagaacagtcagaagaagaagaaagcggtaaagcagccgcagcctgagcaggag
gaggatccctacggcggctccacagacgagaacacagacgcggagcaagaacaggatcat
cccatcccagatctgccggactacctgaacgggaagcactttttcctctacggaaagttc
cccaacaacgagaggagactcctgacgcgctacattgccgcctttaacggcgtactggag
gactacatgtcggacacggtgcactttgtggtgaccggcgaaggatggcacgactccttt
gaggacgcactgatggacaacggcaacctgaacttcgtcaagcccgcctggatcttcgcc
atcaaccagcgtcagaagctgctgccttaccagccttacaccgtggtgccatga

DBGET integrated database retrieval system