Syngnathoides biaculeatus (alligator pipefish): 133500498
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Entry
133500498 CDS
T09681
Symbol
tars2
Name
(RefSeq) threonine--tRNA ligase 1, cytoplasmic isoform X1
KO
K01868
threonyl-tRNA synthetase [EC:
6.1.1.3
]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
133500498 (tars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sbia01007
]
133500498 (tars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sbia03016
]
133500498 (tars2)
Enzymes [BR:
sbia01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.3 threonine---tRNA ligase
133500498 (tars2)
Amino acid related enzymes [BR:
sbia01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
133500498 (tars2)
Transfer RNA biogenesis [BR:
sbia03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
133500498 (tars2)
Prokaryotic type
133500498 (tars2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
HGTP_anticodon
TGS
tRNA_SAD
Motif
Other DBs
NCBI-GeneID:
133500498
NCBI-ProteinID:
XP_061675221
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All DBs
Position
5:28731913..28756260
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AA seq
698 aa
AA seq
DB search
MFIRAIVLEMSVTQLFRLVVRHSTAPAFRRYSKVCPAVPERVQIFESLREIKDKKKIVEA
SEKHLSIHVGQGQLVKGTSGVTTPLSVAQSIREKGAIVSKVNGELWDLGRPLEADCHLQF
IGFDSLEGRQVVWRTGACVLSGVLEREFGARVCREGASEFGLYCDHLLENSAAVSLSDVE
ERCKAASALKLPLTRLELDAQEISELFQDDQLRLRLVQEQMNGPTATVYRCGDSIALCNG
PLLHHTGLLRVFKMLRLSTLTLADQSECPGLMRLSGVAFLREKDKEEWDREQEEAHRRDH
RRIGTDQELFFFNDVSPGSCFFLPKGAHVYNTLTDFIKSEYRRRGFTEVITPTLYNVSLW
ERSGHWEHYSDNMFTVNLEGSQTYALKPMNCPAHCLMFEQRVRSWRELPLRWADFGALHR
NELSGALGGLTRVRRFCQDDAHIFCTPDQLEDEIVACLDFVRRVYQVFGFSFHCLLSTRP
TPCLGEPEQWDHAEQELERSLQQFGERWELNPGDGAFYGPKIDIQIRDAIGRQHQCATIQ
LDFQLPIRFNLQYVARDGQLQRPVMIHRAVLGSLERMIAILAENFGGKWPLWLSPAQVIV
IPVTISCQPAAEQVVQQFHEAGFMVDLNEDTKATLSKRIRSAQLAQYNYILVVGDQERES
HTVSVRSRGGKQLGRRPIEEVLMSLKRLRDCKSNEDNF
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgtttatacgggcaattgtgttggagatgtcggtgacgcagctctttcggctggtggtc
cgtcattcgactgctcccgcgttcaggaggtacagcaaggtgtgcccagcggtaccagag
cgagtgcaaatatttgagtctctcagggagataaaggacaaaaagaagatagttgaggct
tccgaaaagcacctcagcatccacgtaggtcaaggccagcttgtgaagggaacatccggg
gtcacaacgccgctctctgtcgcacagagtattcgtgagaaaggagcaatagtgagcaaa
gtgaatggggaactatgggatcttgggcgtcccctagaggctgattgtcacctacaattt
attggatttgactcacttgagggaagacaggtagtatggcggactggggcatgtgtgttg
agtggagtgttggagagggagtttggtgcccgggtgtgtcgtgaaggagcatctgagttt
ggcctttactgtgaccatttgctggagaacagtgccgctgtgtctttgagtgatgtggag
gaaaggtgtaaagctgcttctgccctcaagttgcctctgaccaggctggagcttgacgca
caagagatcagtgagctcttccaggatgaccagctcagattacgacttgtacaggagcag
atgaatggccccactgctacagtatacaggtgtggagacagcatagcactatgtaatggc
ccccttctccaccacactggcctcctcagggtgttcaagatgctccgactctcaactctg
accctggccgatcagagtgagtgtcccggtttgatgcgtctctctggggtggcctttctc
agagagaaggataaggaggagtgggacagggagcaggaggaggcccacaggagggaccac
agacgcatcggcacagaccaagagctgttcttcttcaatgatgtcagtccaggaagctgc
ttcttcctgcctaaaggagcccacgtgtacaacaccctcactgacttcatcaagagtgag
tatcggcggagaggattcacagaggtcatcaccccgacactgtacaacgtttcattgtgg
gagcgttcgggccattgggagcactacagtgacaacatgttcacagtgaacttggaaggc
tctcagacctacgcactcaagcccatgaactgccctgcacactgcctgatgttcgagcag
cgtgtccgctcgtggcgagagcttcctctacgctgggctgacttcggggcgctgcatcgc
aatgagctctccggcgctctgggaggtctcacccgtgtccgcaggttctgccaggacgac
gctcatatcttctgcacacctgaccagctggaagatgagattgtggcttgtttggatttc
gtgaggcgcgtttatcaagtgtttgggttttccttccattgccttctgtccacacgtccc
actccctgcctcggggagccagagcagtgggaccatgccgagcaggagttggagcggagc
ctgcagcagtttggcgagcggtgggagttgaatccaggagatggagccttctatgggcca
aagattgacatccagatcagagatgctattggccgacagcaccagtgcgcaaccatccag
ttggactttcagctgccaatcagatttaatcttcagtatgtggcgcgagatggccagttg
caacgccctgtgatgatccaccgtgcagtgctgggatcactggagagaatgattgccatt
ttggctgaaaactttggagggaaatggccactatggttgtctccagctcaggtaattgtc
atccctgttacgatcagctgtcagccagccgcggaacaggtggttcagcagtttcatgaa
gctggcttcatggtggacttgaatgaagacaccaaggccaccttaagtaagaggatccgc
tctgctcagctggcacagtacaactacattctggtggtgggcgatcaggaacgtgagagc
cacacggtgagtgttcggagtcgaggcggcaagcagctgggtaggcgacccatcgaggag
gttctgatgagcctcaaacggcttcgagactgcaagagtaacgaggacaacttttaa
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