Syngnathoides biaculeatus (alligator pipefish): 133500626
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Entry
133500626 CDS
T09681
Symbol
ascc3
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3 isoform X1
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbia03400
]
133500626 (ascc3)
Enzymes [BR:
sbia01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
133500626 (ascc3)
DNA repair and recombination proteins [BR:
sbia03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
133500626 (ascc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
AAA_22
Helicase_PWI
Motif
Other DBs
NCBI-GeneID:
133500626
NCBI-ProteinID:
XP_061675541
LinkDB
All DBs
Position
5:32789812..33048346
Genome browser
AA seq
2236 aa
AA seq
DB search
MSPPRLTGALRSFSIVTKKEDLNENVSDLKLKRMKKRELFGREGLTWQKILHFCTDHQDK
MKQHAVHQELKNLLSAAKEIVGTENGQEAVEHAAVFLFEIFHDKDHVGRQETEAIKEMFG
PFPSSAAELFFACVVRLVDSLNYSGMKEFIHSYRSPHTLHHGSSFGCNIAFTHDCYKLDP
LEELLCSGIQNQNMSIDFHNFLKTQPSRMNVVNDGEMFTTEKSWMNGAILRTEVEKYLNE
GNMISSSPEDLCTSIFEMLASHKSNDELQNELFELLGPEGLEMIYTLLQKREVIVDSPQN
IPPLSRGQSGNLNDSVRKLSDEVTRPAYGCQVTIHSEQERHLMKIFRREEKRERKRGKGT
DDVECSDAILNFDPKEMRTQREQALLTARHEPVLGRERVYERIKYPNVYDSYADATKTHA
FVGGATMLLPLGIRRENTKMYEEVEIPPNAPMPIGFEEKPIYITELDEIGQLVFKGMKRL
NRIQSLVFETAYNTNENLLICAPTGAGKTNIAMLTVLHEIRLHLQPGGIIKKNEFKIVYV
APMKALAAEMTNYFSKRLEPLGIAVKELTGDMQLTKGEILQTQMLVTTPEKWDVVTRKSV
GDIALSQIVRLLILDEVHLLHEDRGPVLESLVARTIRQVESTQSMIRILGLSATLPNYLD
VATFLHVNPYIGLFFFDSRFRPVPLGQTFVGIKSTNKIQQIHDMEEVCYNKVVEQVKAGH
QVMVFVHARNATVRTAMGLIEMAKNRGEACVFQPDQGPDYGQCEKQVHRSRNKQMKEMFP
EGFGIHHAGMLRADRNLMESMFSRGYLKVLVCTATLAWGVNLPAHAVIIKGTQIYDAKRG
ALVDLGILDVMQIFGRAGRPQFDKYGEGTIITTHDKLSHYLTLLTQQNPIESQFLVSLAD
NLNAEIALGTVTNVDEAVRWLSYTYLYVRVRANPLAYGISYKALQMDPSLELYRKEIVID
SGRKLDKARMIRFEERTGYFASTDLGRTSSHFYIRYNTIETFNELFNSQRTEADILSIVS
KAEEFEQLKVRDEELEELEQLLCNYCELPAAGGVENGYGKVNILLQTYISRGDVDSFSLI
SDLSYVAQNAARIVRALFEIALRKRWPAMTYRLLRLCKVIDKRLWGFAHPLRQFSNLSHI
VLTRLEDKNLTVDKLKDMRKDEIGHMLHHVNIGLTVKQCVHQIPSITLEANVQPITRTVL
RVRLIVTPDFYWNDQVHGSVAEPWWLWVEDPINDHIYHSEYFLLQKKQVVTVEAQHIVFT
IPIFEPVPSQYYIKGVSDRWLGAEAICIINFQNLILPEQHPPHTELLDLQPLQVTALGSP
AYESLYNFTHFNPIQTQIFHTLYHTDTNVLLGAPTGSGKTIAAELAMFRVFNKYPSSKVV
YIAPLKALVRERIEDWKVRIEEKLGKKVVELTGDATPDMRAIAQADLIVTTPEKWDGVSR
SWQNRSYVQKVAILIIDEIHLLGEDRGPVLEVIVSRTNFISSHTSKGVRIVGLSTALANA
RDLADWLGIIQVGLFNFRPSVRPVPLEVHIHGFPGQHYCPRMATMNKPTFQAIRSHSPAK
PVLIFVSSRRQTRLTALDLIAYLATEDNPKQWLHQDEREIEDIIATIRDSNLKLTLAFGI
GMHHAGLHERDRKTVEELFVNCKIQVLIATSTLAWGVNFPAHLVVVKGTEYYDGKTRRYV
DYPITDVLQMMGRAGRPQFDDHGKAVILVHDIKKDFYKKFLYEPFPVESTLLSVLSDHLN
AEIAAGTISSKQDAMDYITWTYFFRRLVMNPRRGPGFESLNACMKLNLTIYETDSKAIGK
TVQHQMSHQCYYSLENISHDSINKYLSGLVERSLRDLQCSYCIEIKEDDQVIEPQTYGRI
ASYYYLKHQTIRLFKERLRAELPIHEILSILTDAEEYAELPVRHNEDQLNCQLAQQLPLK
VNAHSYDNAHTKTHLLLQAHFSNAQLPCSDYSTDTKTVLDNAIRICQALLDVAANEGWLV
TALSICNLVQMIVQGRWLHDSSILTLPHLEQRYLCMFRKWSNQNGGGRTGSDSGPIEGLP
ELITVCSGKERIFKAIVGDEFPSSHVTQMWDFLSHLPVLEVALSVKGWWEASQQQTECHL
PATGAHLRGARSWLDVHADQEYVLQVTLRRINQAQMRRNQDSKAQAPRFPKVKDEGWFLV
VGEVDHKALLAAKRIGYVRNHTTVSMAFYTPEKTGKCIYTLYLMSDSYLGLDQQYDIHLN
VIPASIAAQVNTEVTD
NT seq
6711 nt
NT seq
+upstream
nt +downstream
nt
atgtctcctccgcggctgacaggagctttacgctccttttctattgtcaccaagaaggag
gacttaaatgagaacgtctccgatctcaagctcaaacgtatgaagaaacgggagctgttt
ggaagagaagggctcacatggcagaagattctgcatttttgcactgatcatcaggacaaa
atgaagcaacatgctgtccatcaggaattaaagaaccttctttctgcagccaaagagata
gtggggactgaaaatggtcaagaggctgttgaacacgctgctgtctttctctttgaaatt
ttccacgacaaagaccatgtgggcagacaggagactgaggccattaaggagatgtttggc
ccttttccctcatctgctgccgaattattttttgcttgtgtggtacgactggtggattca
cttaactattctggaatgaaggaatttatccactcctatcgctcacctcacacacttcac
catgggtcttctttcggatgtaacattgcttttacccatgattgctataagcttgacccg
ctcgaagaactgctgtgctctggcatccaaaatcaaaacatgagcatagactttcacaat
ttcctaaagacccaaccaagcaggatgaatgttgtcaatgatggagagatgtttaccaca
gaaaagtcttggatgaatggagctatcctcaggacagaagtggagaaatatctgaatgaa
ggaaatatgatatcttctagcccagaggatctttgcacctctatatttgagatgcttgcc
tctcacaaaagcaatgatgagctacagaatgagttatttgagctgcttggcccagaaggt
ttagaaatgatctacacacttttgcagaaaagggaagttattgttgactccccgcaaaac
attccaccactttccaggggacagtcaggtaatttaaatgattccgtccgaaaactcagt
gacgaagttacaaggccagcctatggctgtcaggtgaccattcactctgaacaagaaaga
catttgatgaagatatttcgcagggaagagaagagagagaggaaaaggggaaaaggaact
gatgatgtggaatgctcagatgctatcttgaattttgacccaaaagagatgagaacccaa
cgggagcaggctttgttgactgcacgacatgaacctgtacttggtagagaacgagtgtat
gaacggattaaatacccaaatgtctatgacagctatgccgacgccacaaaaacacacgct
tttgttggaggagcaacgatgctgctacctctgggaatccgcagagaaaatactaaaatg
tacgaagaggtggagattccacctaatgcaccaatgccgattggctttgaagagaagccc
atctacatcactgaactggatgaaattggacaactggtattcaaaggaatgaagcgtctg
aacaggatccagtcattggtgtttgagactgcctacaacaccaacgaaaacctgctaatc
tgtgccccaactggagctggcaagaccaacatcgccatgctgaccgtcctacatgagatt
cggctacacctacaacctggtggtatcatcaaaaagaatgaattcaagattgtgtatgtt
gctccaatgaaggctttggcagctgagatgaccaactatttcagtaagcgattggagcca
ctgggcattgctgtcaaagaactcactggcgacatgcagttaaccaaaggggaaattctt
caaactcagatgttagtgaccaccccagagaagtgggatgttgtgacaagaaagagtgtt
ggagacattgctctatcccagattgtacgtctcttaatcttggatgaagttcaccttctt
catgaagatcgaggaccagtactggagagccttgtggcccggaccatcagacaggtggaa
tccacccagagtatgattaggattctgggattgtcagccactcttccaaactatctagat
gtggcaacctttttgcatgtcaacccgtatattggcctcttcttcttcgacagtcgtttc
agaccagtgccgctcggacagacctttgtggggatcaaatctacgaacaagatccagcaa
attcatgacatggaggaagtgtgctataacaaggttgttgaacaagtcaaagctggtcat
caggtaatggtgttcgtccatgctcgtaacgccacagtgaggacggccatggggctaata
gagatggctaagaaccgtggagaagcatgtgtctttcaaccagaccagggtccagactac
ggccagtgtgaaaaacaggtccatcggtctagaaacaagcaaatgaaggagatgtttcca
gaaggttttgggatccaccatgcaggcatgctgcgggctgaccgcaatctgatggagagt
atgttctcgagggggtacctcaaggtgcttgtctgtactgccacccttgcctggggagtg
aacctaccagcccatgctgttatcattaaggggacacagatttatgatgccaagcgtggt
gccctggtggatcttggcatcttggatgtgatgcagatttttggtcgtgcaggccgtcct
cagtttgacaagtatggggagggcaccatcattacgacccatgacaagctcagccattac
ctgaccctgctcacccagcagaaccccattgagagtcagtttcttgtcagcctggctgac
aatctcaatgctgagattgctttgggtacagtcaccaatgtggatgaggcagtgaggtgg
ctcagttacacttatctctacgtgcgcgtgagggctaatccacttgcatatggtataagc
tacaaggccttgcagatggatccctccttagagctgtacagaaaagaaattgtgattgat
tctggcaggaagttggacaaagccaggatgatccgctttgaagagcgcacaggctacttt
gcctcgactgatctggggaggacatccagccacttctatatcagatacaacacaatagag
acattcaatgaacttttcaactctcagcgaacagaagcggacatcctcagtattgtctcc
aaggctgaagaatttgaacagctaaaggttcgtgatgaagagctggaggagctggagcag
ctgctgtgcaactactgtgagctacctgcagcaggtggagtggaaaatggctatggcaag
gtcaacattctgttgcagacatacataagtcgtggagatgttgacagcttctcccttatc
tcagacctttcatatgtggcccagaatgctgctcgaattgtcagggcactgtttgagatt
gctctaagaaagcgttggccggccatgacatatcgactgcttagactctgcaaagtcatt
gacaaacggctttggggctttgcccaccctcttcgccagttctccaatttaagccacatt
gtactgactcgactggaggacaagaatctcactgttgataaactaaaggatatgagaaag
gatgaaattggccacatgctacatcatgtaaacattgggttgacagtcaaacagtgtgtc
catcagatcccttcgatcacattggaggccaacgttcaaccaatcacacgaactgtccta
cgcgtccgtcttattgtcactcctgacttttattggaatgatcaggtgcatgggtctgtg
gctgagccatggtggttatgggtggaagacccaattaatgatcacatttaccactctgag
tacttccttctccagaaaaagcaggtggtgacagtagaagcccagcatatagttttcaca
attcccatctttgaacctgtcccctctcagtactacataaaaggagtgtctgaccgttgg
cttggtgctgaagccatctgcatcatcaacttccagaaccttatcttacctgaacagcac
cccccacacactgagttgttggacctgcagccgttgcaagtgacagctttgggatccccg
gcatatgaaagcttgtacaacttcactcatttcaatccaatccagacacagatcttccac
acactctatcacactgacactaatgtcttgcttggggcaccaacgggctctggaaagacc
atagctgctgagctggccatgttcagagtcttcaacaagtacccaagctctaaggtggtg
tatattgcccctcttaaagcgctagtcagagaaagaattgaggactggaaagtcaggata
gaggagaaactggggaaaaaggtggtggaactgacaggtgatgcgaccccagatatgaga
gctatcgcccaggctgatctcatcgtcaccacaccagagaagtgggatggagtcagcaga
agctggcaaaatagaagctacgttcagaaagttgcaatcctgatcattgatgaaatccac
cttcttggggaagatagaggtccagtgttggaagtcattgtgtcaaggacaaacttcatc
tcctcgcacacctctaaaggtgttcgaattgtcggtctctccactgctctggctaatgcg
cgagaccttgcagactggttaggaatcatacaggtgggtttgtttaacttccgtccttct
gttcgtcctgtaccactggaggttcacatccatggtttcccaggacagcactactgtccc
cgcatggccaccatgaacaaacccaccttccaagcaatacgtagtcattctccagctaaa
ccagtcctgatctttgtctcatcccgtcgtcaaacccgactgacagccctggacctcata
gcatacctagcgacagaagacaaccccaaacagtggctgcatcaggacgagagagaaatt
gaggacatcattgccacaatacgggattctaacttgaagctaactttggcatttggaatc
ggaatgcatcacgctggtctgcatgagcgagacagaaaaactgttgaggaactgtttgtc
aattgcaagatccaggttttgattgccacaagcactctggcttggggagtaaacttccct
gctcatctggtggttgtcaaaggaacagaatactatgatggaaagaccaggcgatacgtt
gactaccctattacagatgttttgcagatgatggggcgagcaggtcgacctcagtttgat
gaccacggcaaagcagttattcttgtccatgacatcaaaaaagatttctacaagaaattt
ctctacgagcctttccctgttgagtccaccctccttagtgtgctgtcagaccatttgaat
gcagagattgctgcagggacgatttcttccaagcaagatgcaatggactacatcacctgg
acttactttttcagacgactggtgatgaaccccaggcgggggccaggatttgaaagtctc
aacgcctgcatgaagcttaatctgacgatatatgaaacagactccaaagccataggcaaa
accgtgcagcaccagatgtcacatcaatgttactatagcttggaaaacatcagtcatgac
tccattaacaagtatctgtctggcctggtggaaaggagcctacgggacttgcagtgctcc
tactgcattgaaataaaagaggatgaccaggtgattgagcctcagacttatggtcgtatt
gcatcatattactacctgaagcaccagaccatccgcttgtttaaagaaagactaagagct
gaacttcccatccatgagattctttccattttgacagatgcagaagagtatgctgagctt
cctgtgagacacaatgaagaccaactcaactgccagctggctcaacagctccccctgaag
gtcaatgcacattcctatgacaatgcccacacgaagactcacttactccttcaggctcac
ttcagcaatgcccagttaccatgcagtgactattcaactgataccaagactgttctggac
aatgccattcgaatctgtcaggctttgcttgatgtagcagccaatgagggctggcttgtt
acagctttaagcatctgcaacctagtgcagatgattgtccaaggccgctggctgcatgat
tcttcaatactgacgctgccacatttggaacaacggtacctctgcatgttcaggaaatgg
tcaaaccagaacggagggggtaggacaggatccgacagcggaccaattgaagggcttcct
gagctgataactgtctgcagtggaaaggaaaggatttttaaagcaattgttggagatgag
tttccttcaagtcatgttactcagatgtgggatttcctcagtcatcttcctgtactcgag
gttgcattgagtgtcaagggatggtgggaggcgagccaacaacaaacagaatgccatttg
cctgctactggagcacacctgagaggggccaggagctggctggatgtccatgctgaccag
gagtatgttttgcaggtgacactgaggcgcatcaaccaagcacagatgaggaggaatcag
gacagtaaggctcaggctccaagattccctaaagtgaaagatgaaggctggttccttgtt
gttggtgaggtggatcacaaggcgttactggcagccaaacgaattggatatgtgcgcaac
cacacaacggtgtctatggccttctacacaccagagaaaactggaaaatgtatctacacg
ctctacttgatgagcgacagctacctgggcctggaccagcagtatgacattcacctcaat
gtgataccagccagcatcgctgcccaggtcaacacagaggtcacagactag
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integrated database retrieval system
