Syngnathoides biaculeatus (alligator pipefish): 133500689
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Entry
133500689 CDS
T09681
Symbol
usp5
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 5 isoform X1
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sbia01002
]
133500689 (usp5)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sbia04121
]
133500689 (usp5)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sbia04147
]
133500689 (usp5)
Enzymes [BR:
sbia01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
133500689 (usp5)
Peptidases and inhibitors [BR:
sbia01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
133500689 (usp5)
Ubiquitin system [BR:
sbia04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
133500689 (usp5)
Exosome [BR:
sbia04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
133500689 (usp5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UBA_7
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_9
UBA_DHX29
Pox_RNA_pol
UBA_4
Motif
Other DBs
NCBI-GeneID:
133500689
NCBI-ProteinID:
XP_061675696
LinkDB
All DBs
Position
5:complement(31859285..31874600)
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AA seq
854 aa
AA seq
DB search
MADVSEVLMSVLSTIRVPKPGDRVHKDECALSFSSPESEGGLYVCMNSFLGFGSQYVDRH
HARAGQRAYLHITRTRKAKKEDDSNSGSGHPPKKKPTRLAIGIEGGFDVEQEHYEEEYKV
VIFPDKQEVTTEDLGAMPDVVKERVSLSMAGIIAADSVSHTLQVQQWDGEVRQESRYAAD
LKQLDNGVKIPPSGWRCEVCGLQENLWMNLTDGKVLCGRKYFDGSGGNNHALLYFQETGY
PLAVKLGTITPDGADVYSYDEDDMVLDSKLPEHLSHFGIDMMTMEKTERTMTELEIAVNQ
RVGEWEVIQESGTTLRPLFGPGLTGMKNLGNSCYLNSVMQVLFTVPDFQSKYVSNIDKII
DGAPSDPTQDFKTQVAKLGYGLLSGKYSKPAPDPGDENSAAESKVRGEGGGGGAVCCCLF
DHAFSNIFSQDYQIGIAPRMFKALVGRGHPEFSTNRQQDAQEFLLHFINMVERNCRSGPN
PSEAFRFLVEERIVCQQSQKAKYTQRVDYIIQLPVPMDQAINKDELQEAERQRENGDSTA
TPVRAQIPFAVCMAALSEPELLTDFWSSAVQTKTTATKTTRFASFPDHLVIQIKKFTFGL
DWVPKKLDVSIDVPDTLDLSALRASGQQPGEELLPEVAPPPLMTPDVEVKAPVLDDSTVS
QLCDMGFPLEACRKAVYYTGNTGIDSAMNWVMGHMDDPDFSAPLVLPGCSGGTTPTMENV
SEEHLATIVSMGFSREQATKALRATSNTLERAVDWIFSHLDDLESMEVSEGGRSAADSEA
AREPPPGPCVRDGPGKYELFAFISHMGTSTMCGHYVCHIKKDQQWVIFNDQKVCASEKPP
KDLGYLYFYRRMSE
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtcagcgaagttttgatgtcggttttgtccacaattcgggtgccgaagccc
ggggaccgcgtccacaaagatgaatgcgccttgtcattttcctccccggaaagcgaagga
gggttgtatgtatgcatgaacagcttcctgggctttggaagccagtatgtggacaggcac
cacgctcgggctgggcagagggcttacttgcacattaccaggactcggaaggccaagaag
gaagacgacagtaactctggatcaggacacccgcccaagaagaagcccaccagattggcg
atagggattgaaggtggttttgatgtagagcaagagcactatgaggaagaatacaaggtt
gtcatctttcctgacaaacaggaagtcacaacagaggaccttggagccatgcctgatgtt
gtcaaagagagggtgtccttgtcaatggcaggcatcatcgccgccgactcggtgtctcac
accttgcaagtgcaacagtgggatggggaggtgagacaggagtcgcgatatgccgccgac
ctcaagcagcttgacaatggcgtcaagatccctcccagtggctggcggtgtgaagtgtgc
ggtctccaggaaaatctctggatgaacctgacggacggcaaggtgctttgcggtcgcaag
tactttgacggctcgggcggcaacaatcacgccctcctctactttcaagagacgggatac
ccgctggcggtcaaacttggaaccatcaccccagacggagcagatgtttattcttacgat
gaggatgacatggtgctagactccaagttaccagagcatctttctcactttggcatcgac
atgatgactatggagaaaaccgagcggaccatgacagagctggagattgccgtgaaccag
cgcgtcggggagtgggaggtcatccaagagtccgggaccactctgcgtccgctgtttggc
cccggcctgacgggcatgaagaacctgggcaacagctgctacctcaactctgtcatgcaa
gtgctcttcaccgttccagacttccagagcaagtatgtgtccaacattgacaaaattatt
gacggggctccaagtgaccccactcaagacttcaaaacccaagtagccaaactgggctac
ggcctgttgtcgggtaaatattccaaaccagcgccggatcctggcgatgaaaatagtgca
gctgagtccaaggtaaggggcgaggggggaggcgggggagctgtttgctgttgtctattt
gatcatgcattttccaatattttttcacaggattaccaaatcggcatagcaccaagaatg
ttcaaagcacttgttgggcggggccacccagagttctccaccaatcgacagcaggatgct
caggaatttctattgcacttcataaacatggtggagagaaactgtcgctcagggcccaac
ccttctgaagccttcaggttcttagtggaggagaggattgtttgtcagcagtcccagaag
gccaagtacacacagcgagtggattacatcatccagcttcccgtgcccatggaccaagcc
atcaacaaagatgagctgcaggaggcggaacggcaacgtgaaaacggtgactcgactgcc
acgcccgtgcgagcacaaattccctttgcggtttgcatggcggccctcagcgaacctgaa
ctccttacagacttctggagctccgctgtgcagaccaagaccactgccaccaaaacaacc
cgctttgcctcatttcctgaccacctggttatccagataaagaagttcacatttggcctt
gactgggtccccaagaaacttgatgtgagcatcgatgtccccgacacgctggacctgagt
gcgcttcgtgcgtcagggcaacagccgggagaggagctcttaccagaggtggccccgccc
ccactcatgacccctgatgtggaggtcaaagctccggtgctggacgactccaccgtttcg
cagctgtgcgacatgggattccccttggaagcgtgcaggaaagccgtttactacactggg
aacaccggcattgactctgccatgaactgggtgatgggccacatggacgatccagacttc
tctgcccccttggtattgcccggctgcagtggcggaaccacgccgacgatggagaacgtc
tccgaggagcaccttgcaaccatcgtctcaatgggcttcagccgagaacaggcaaccaaa
gcgcttcgagcaacgagcaataccctggagcgagccgtggactggattttctcacacctg
gatgacctggagtccatggaggtgtcagaaggaggccgctcggccgccgacagcgaggcc
gctcgggaacctcctcccgggccttgcgtcagagacggaccaggcaaatatgaactgttt
gccttcatcagccacatgggcacgagcacaatgtgcggccactacgtctgtcacatcaag
aaggatcagcagtgggtcattttcaacgaccagaaggtgtgcgcctccgagaaacctccc
aaggacctggggtacctctacttctaccggcggatgtcggaatga
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