Syngnathoides biaculeatus (alligator pipefish): 133500717
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Entry
133500717 CDS
T09681
Symbol
tubb5
Name
(RefSeq) tubulin beta-5 chain
KO
K07375
tubulin beta
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Pathway
sbia04145
Phagosome
sbia04540
Gap junction
sbia04814
Motor proteins
sbia05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
133500717 (tubb5)
09144 Cellular community - eukaryotes
04540 Gap junction
133500717 (tubb5)
09142 Cell motility
04814 Motor proteins
133500717 (tubb5)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
133500717 (tubb5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sbia03036
]
133500717 (tubb5)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
sbia04812
]
133500717 (tubb5)
04147 Exosome [BR:
sbia04147
]
133500717 (tubb5)
Chromosome and associated proteins [BR:
sbia03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
133500717 (tubb5)
Cytoskeleton proteins [BR:
sbia04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
133500717 (tubb5)
Exosome [BR:
sbia04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
133500717 (tubb5)
Exosomal proteins of colorectal cancer cells
133500717 (tubb5)
Exosomal proteins of bladder cancer cells
133500717 (tubb5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Misat_Tub_SegII
Tubulin_2
Tubulin_3
Motif
Other DBs
NCBI-GeneID:
133500717
NCBI-ProteinID:
XP_061675780
LinkDB
All DBs
Position
5:complement(31626961..31633825)
Genome browser
AA seq
444 aa
AA seq
DB search
MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLDRISVYYNEATGGKYV
PRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
RKESESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQVFDAKNMM
AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
LKMAVTFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQDATAEEEGEFEEDAEEDA
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atgagggagatcgtgcacatccaggccggccagtgcggcaaccagattggtgccaagttc
tgggaagtgatcagcgatgagcatggcatcgacccaacggggacctaccatggagacagc
gacctgcagctggacaggatcagcgtctactacaacgaggccacaggagggaagtatgtc
ccccgcgccatcctggtggacttggagccaggcaccatggactctgtgaggtccggacca
ttcggccaaatcttcagaccagacaattttgtctttggccaaagcggtgctggcaacaac
tgggccaagggtcactacactgagggcgccgagctggtagactccgtgctggatgtggtc
cgcaaagagtctgagagctgcgactgcctccaaggcttccagctcacgcactccctgggc
ggaggaaccgggtctgggatgggaaccctgctcatcagcaagatccgagaggagtacccc
gataggatcatgaataccttcagtgtggtgccttcacccaaggtgtccgacacagtggtg
gagccctacaacgccacgctctctgtccaccagctggtggagaacacagatgaaacctat
tgcatcgacaacgaggcgctgtacgacatctgcttccgcacgctcaagctgaccacgccc
acttacggagatctcaaccacctcgtctccgccaccatgagcggcgtcaccacatgcctg
cgcttccccggccagctgaacgccgacctgcgcaagttggcagtcaacatggtgcctttc
cctcgtctgcacttcttcatgcccggcttcgcccccctcaccagccggggcagccagcag
taccgcgccctcaccgtgccagagctcactcagcaagtgtttgacgctaagaacatgatg
gcggcgtgcgacccgcgccacggccgctacctcactgtggcagcggtcttccgtggccga
atgtccatgaaggaggtggacgagcagatgctcaacgtgcagaacaagaacagcagctac
ttcgtcgagtggatccccaataatgtgaagacagccgtgtgcgacattccgccccgtggc
ctcaaaatggcagtcacctttatcggcaacagcacggccatccaggagctgttcaagcgc
atttccgagcagttcaccgccatgttccgccgcaaggccttcttgcactggtacacgggc
gagggcatggatgagatggagttcaccgaggccgagagcaacatgaacgacctggtgtct
gagtaccagcaataccaggacgccacagccgaggaagagggcgagttcgaggaggatgcc
gaggaagacgcttaa
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