Syngnathoides biaculeatus (alligator pipefish): 133500768
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Entry
133500768 CDS
T09681
Symbol
smg9
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG9
KO
K18735
protein SMG9
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbia03019
]
133500768 (smg9)
Messenger RNA biogenesis [BR:
sbia03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
133500768 (smg9)
BRITE hierarchy
Motif
Pfam:
Smg8_Smg9
ABC_tran
AAA_16
AAA_18
AAA_30
Motif
Other DBs
NCBI-GeneID:
133500768
NCBI-ProteinID:
XP_061675861
LinkDB
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Position
5:complement(4752232..4764200)
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AA seq
507 aa
AA seq
DB search
MSESGHSQPGMYGPGRRRRRRRGDRDIGPPGQNLSGPSRDREYQPRERRDGSEDPPGPLI
QKTPIILAKPPAERAKPAQNLPVSGAPVLDKPIMLMKARDDAVKPATPPEATPQPSGPSK
VEREGQRPTQPVYQIQNRGMSASATSSAVDPLVGQSKLIPPEKMKHSIKLVDEQMNWCDT
AMEYLRDQTDMLVVGVLGLQGTGKSTVMSLLSANTPEEDPRGYVFRAQTQEIKERGGNQS
TGIDFFITQERIIFLDTQPILSPSVLDHHINNDRKLPPEYNLPYTYVEMQSLQIAAFLFT
VCHVVIVVQDWFTDLNLYRFLQTAEMLKPSTPSTSHDSTGSSGSDDGAEYYPHIVFLQNK
SKREDFCPRNLKDMHVVVDKLMAHSHLKYKGSLSMLDCNIFPGLGQNYMTTEVNMFLLPV
QDSDSEDNLTKAASTMTYPLFSLLPGYKGHPSFSNVVSKLRSQMMAMPRCQLSHTILTEK
NWFHYAARIWDGVKKSSALSEYSRLLA
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaatcgggccacagtcagcctggcatgtatggaccgggacgcaggagaaggcga
cgccgtggcgaccgcgacatcggacctcccggccagaacctgtctggtcctagtcgggat
cgggaataccaacctcgggaacgaagggatgggagtgaagacccaccgggccctctcatt
cagaagacccccatcatcctggccaagccccccgcggagagggccaagccagcacagaat
ttacccgtcagcggagcgccagttcttgacaagccgatcatgctcatgaaagctcgggac
gacgcggtaaagccggcaactcccccggaggcgacgcctcagccttctggtccctccaaa
gtggagagggaaggccagcgacccacccagcccgtctaccagatccagaaccggggaatg
agtgcttctgcaaccagcagcgctgtggaccccttggttggccagtccaaactcatccca
ccggagaagatgaagcacagcatcaagcttgtggatgagcagatgaactggtgtgacact
gccatggagtacctgcgagaccaaacggatatgctggtggtgggcgtcctcggcctgcag
ggaactggaaaatcgactgtcatgtctctgctatcagccaacacccctgaagaagaccca
aggggttacgtattcagagcgcagacgcaagagattaaagagcgcggtggaaaccagagc
acgggaatcgactttttcatcacgcaggagaggatcatcttcttggacacccagccgatt
ctcagcccctccgtcctggaccaccacatcaacaacgatcgcaaattgcccccggagtac
aacctgccttacacatatgtggagatgcagtctcttcagatcgccgccttcctgtttacg
gtgtgccacgtggtcattgtggttcaagactggttcacggacttaaacctctacaggttt
cttcaaacggccgagatgctgaaaccttccactccgtccacaagccacgacagcacgggc
tcttctggcagtgatgacggcgcagagtactatccacatatagtgttcctccagaataag
agcaagcgtgaggacttctgcccgaggaatctcaaggacatgcatgttgtggtggacaaa
ttaatggcccactcccacctcaaatacaaaggttcgctgtccatgctagactgcaatatc
tttcctggtctgggccaaaactacatgacgactgaagtcaacatgttcctgctgcccgtg
caggacagcgacagcgaggataatctgacgaaagcagcttccacaatgacgtatcccctc
ttctccttgctgccggggtacaagggccacccgtccttctccaacgtggtctccaagttg
cgcagccaaatgatggccatgccccgctgtcagctgtcgcacaccatcctcactgagaag
aactggtttcactacgccgctcgaatctgggacggtgtgaaaaaatcctcggccctctcc
gagtacagccgcctgctggcctag
DBGET
integrated database retrieval system
