Syngnathoides biaculeatus (alligator pipefish): 133500888
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Entry
133500888 CDS
T09681
Symbol
mex3a
Name
(RefSeq) RNA-binding protein MEX3A
KO
K15686
RNA-binding protein MEX3 [EC:
2.3.2.27
]
Organism
sbia
Syngnathoides biaculeatus (alligator pipefish)
Brite
KEGG Orthology (KO) [BR:
sbia00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbia03019
]
133500888 (mex3a)
04121 Ubiquitin system [BR:
sbia04121
]
133500888 (mex3a)
Enzymes [BR:
sbia01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
133500888 (mex3a)
Messenger RNA biogenesis [BR:
sbia03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
133500888 (mex3a)
Ubiquitin system [BR:
sbia04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
133500888 (mex3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_Vigilin
zf-C3HC4_3
KH-I_KHDC4-BBP
zf-RING_2
KH_2
Prok-RING_4
zf-C3HC4
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
133500888
NCBI-ProteinID:
XP_061676115
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All DBs
Position
5:complement(7752352..7761805)
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AA seq
551 aa
AA seq
DB search
MPSLLVLAGIMEKNGGYGADLAGSGFGTEAGLLGPPDDDEDDSRALRVALGQLSLLGLGE
GEDVGGGGGGGGGGGNVIGGGGGAPATGVQDRSNNNNNNHHNSAGGGIGGIGGIGGGGDA
SILQGKSKLCALYESSSGEPKGRGCNITECVPVPSSEHVAEIVGRQGCKIKALRAKTNTY
IKTPVRGEEPVFLITGRKEDVALARREIISAAEHFSMLRASRNKLGVSFSGSPPTPLPGQ
TTIQVRVPYRVVGLVVGPKGSTIKRIQQQTCTYIVTPSRDRDPVFEITGSPSNAERAREE
IEAHIAFRTGGLHDHNNENDCLGPNGGSSPAGSSGSGGGGLESRLQQVWGLQGGQRKPLT
SSYRQNFSDALGGGGGGGGGGGGGSEGVGIYNKGNFSSSEKPCSFFGSEGTQSWGDPDYP
KQMAFYAQQRSKSFGGLPLPLTRLSPGLPEPPANSSVTGLASGSPHAQARRAHSEPTSAG
EGGFPGRLPVPDSPPAVRDCMTCFESKVTAALVPCGHNLFCMECAIRICELNHPECPVCH
TQVSQAIRIFS
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgccgagcctgctggtgctcgcagggatcatggagaaaaacgggggctacggcgccgat
ctggccggctccggcttcgggaccgaggcgggtctgctggggccccccgacgatgacgag
gacgactcccgagccctgagggtcgcgctcggccagctgtcgctcctggggctcggcgag
ggcgaggacgttggaggaggtggaggtggaggaggtggtggaggtaatgttatcggcggc
ggcggaggagctccggcgaccggagtgcaggaccggagcaacaacaacaacaacaaccac
cacaatagtgcggggggaggaatcggaggaatcggcgggatcggaggcggaggggacgcg
tcgatcctccaaggcaagagcaagttgtgcgccctgtacgagagctcgtccggggagccc
aaaggacgcggctgcaacatcaccgaatgcgtcccggtgcccagctccgagcatgtggcc
gagatagtgggcaggcaaggttgcaagataaaagccttgcgggccaagaccaacacctac
atcaagacaccggtgcgaggcgaggagcccgtgttcctgatcaccggccgcaaggaggac
gtggccctggctcgccgtgagatcatctcggcggccgagcacttctccatgctccgggcg
tcgcgcaacaagctgggcgtgtccttcagcggctccccgcccaccccgctccccggccag
accaccatccaggtgagggtgccgtaccgagtggtggggctggtggtgggccctaaaggt
tccaccatcaagcgcatccagcagcagacgtgcacgtacatcgtcaccccgagccgggac
cgggaccccgtctttgagatcacggggtcgcccagcaacgccgagcgggcccgcgaggag
atcgaggcccacatcgccttccggacaggagggctgcacgaccacaacaatgagaacgac
tgcctgggacccaacggcgggagcagtcccgcggggagcagcggcagcgggggcggcggc
ctggagagtcggcttcagcaagtgtggggcctccagggaggccagcggaaacctctcacc
agcagctaccgccaaaacttctccgatgccctcggaggaggaggaggaggaggaggagga
ggaggaggcggcagcgagggagtcgggatctacaataagggcaacttctccagctctgag
aagccctgctcctttttcggttctgagggcacccagagttggggcgaccccgactacccc
aagcagatggctttctacgctcagcagcgttccaagagcttcggagggctcccgctgccc
ctcaccagactctcgccggggctcccggagccacccgccaactcctccgtcaccggcctg
gcgtcggggtcgccccacgcgcaggcccggcgcgcccacagcgagcccacctcggccggg
gagggcggcttccccgggcggctacccgtgccagactcgccgccggccgtgcgggactgc
atgacctgctttgagagcaaagtgacggccgccctggtgccctgtggccacaacctcttc
tgcatggagtgcgccatccggatctgtgagctcaaccaccccgagtgccccgtgtgccac
acgcaggtctcgcaggccatccgaatattctcctaa
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